RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 NPFFR1Q9GZQ6 430 aa11.01□□□□□ -0.65
SHKBP1-207ENST00000595631 AUNIPQ9H7T9 357 aa11.01□□□□□ -0.65
SHKBP1-207ENST00000595631 SCOCQ9UIL1 159 aa11.01□□□□□ -0.65
SHKBP1-207ENST00000595631 TRBV6-7A0A0A0MS04 114 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 A0A0A6YYH2 397 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 A6NJ64 397 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 XRCC3O43542 346 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 LANCL1O43813 399 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 OR2F2O95006 317 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 AMY1AP04745 511 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 AMY2AP04746 511 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 FAM106CPP0CH98 169 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 PROK1P58294 105 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 TMEM69Q5SWH9 247 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 HIST2H2BDQ6DRA6 164 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 Q6ZS49 121 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 ZNF833PQ6ZTB9 187 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 THNSL2Q86YJ6 484 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 GVQW1Q8N7I0 195 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 RAB2BQ8WUD1 216 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 EAF1Q96JC9 268 aaPredicted RBP11□□□□□ -0.65
SHKBP1-207ENST00000595631 RBM14Q96PK6 669 aaKnown RBP11□□□□□ -0.65
SHKBP1-207ENST00000595631 ZNF251Q9BRH9 671 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 AGMATQ9BSE5 352 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 ZNF747Q9BV97 191 aa11□□□□□ -0.65
SHKBP1-207ENST00000595631 RANBP3Q9H6Z4 567 aaPredicted RBP11□□□□□ -0.65
SHKBP1-207ENST00000595631 ZNF182P17025 639 aaPredicted RBP10.99□□□□□ -0.65
SHKBP1-207ENST00000595631 ELK1P19419 428 aa10.99□□□□□ -0.65
SHKBP1-207ENST00000595631 TMBIM6P55061 237 aa10.99□□□□□ -0.65
SHKBP1-207ENST00000595631 TAS2R20P59543 309 aa10.99□□□□□ -0.65
SHKBP1-207ENST00000595631 PITPNAQ00169 270 aa10.99□□□□□ -0.65
SHKBP1-207ENST00000595631 LSAMPQ13449 338 aa10.99□□□□□ -0.65
SHKBP1-207ENST00000595631 SRSF7Q16629 238 aaKnown RBP eCLIP10.99□□□□□ -0.65
SHKBP1-207ENST00000595631 GLDNQ6ZMI3 551 aaPredicted RBP10.99□□□□□ -0.65
SHKBP1-207ENST00000595631 OR10J5Q8NHC4 309 aa10.99□□□□□ -0.65
SHKBP1-207ENST00000595631 ISOC1Q96CN7 298 aa10.99□□□□□ -0.65
SHKBP1-207ENST00000595631 NABP2Q9BQ15 211 aa10.99□□□□□ -0.65
SHKBP1-207ENST00000595631 CEPT1Q9Y6K0 416 aa10.99□□□□□ -0.65
SHKBP1-207ENST00000595631 A0A1B0GUS0 222 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 H3BMQ9 156 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 ITGB1BP1O14713 200 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 TXNL1O43396 289 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 PROP1O75360 226 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 APOA1P02647 267 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 LPLP06858 475 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 LINC00205P59089 165 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 ABCA11PQ4W5N1 156 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 C16orf82Q7Z2V1 217 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 H1FOOQ8IZA3 346 aaPredicted RBP10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 Q8N6K4 173 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 OR2T6Q8NHC8 308 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 EDARADDQ8WWZ3 215 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 ACOT12Q8WYK0 555 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 C5orf30Q96GV9 206 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 GINS4Q9BRT9 223 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 PRSS22Q9GZN4 317 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 SERTAD4Q9NUC0 356 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 PIPOXQ9P0Z9 390 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 MOB4Q9Y3A3 225 aa10.98□□□□□ -0.65
SHKBP1-207ENST00000595631 TET2Q6N021 2002 aaPredicted RBP10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 J3QRK9 145 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 RAB29O14966 203 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 OR8U9P0C7N5 309 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 CT45A6P0DMU7 189 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 CT45A5P0DMU8 189 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 CT45A7P0DMV0 189 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 CD1BP29016 333 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 EBI3Q14213 229 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 C9orf152Q5JTZ5 239 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 MZT2AQ6P582 158 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 Q8N2B8 174 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 DRAXINQ8NBI3 349 aaPredicted RBP10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 OR2T10Q8NGZ9 312 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 OR8U1Q8NH10 309 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 DYNC2LI1Q8TCX1 351 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 SNAPC3Q92966 411 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 RITA1Q96K30 269 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 TOLLIPQ9H0E2 274 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 OR2D2Q9H210 308 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 ANXA10Q9UJ72 324 aa10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 MRPS7Q9Y2R9 242 aaKnown RBP10.97□□□□□ -0.65
SHKBP1-207ENST00000595631 FAM25AB3EWG3 89 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 FAM25CB3EWG5 89 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 FAM25GB3EWG6 89 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 NOL3O60936 208 aaKnown RBP10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 MOSP00540 346 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 HLA-DQB1P01920 261 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 VSIG10L2P0DP72 767 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 NFYAP23511 347 aaPredicted RBP10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 GPR12P47775 334 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 F2RL1P55085 397 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 ARSJQ5FYB0 599 aaPredicted RBP10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 CNIH2Q6PI25 160 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 FAM131AQ6UXB0 335 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 HOGA1Q86XE5 327 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 SNX29P2Q8IUI4 249 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 KLHDC1Q8N7A1 406 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 C5orf56Q8N8D9 126 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 BEST4Q8NFU0 473 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 AP3S1Q92572 193 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms