RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ABHD14BQ96IU4 210 aa8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 RITA1Q96K30 269 aa8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 CITED2Q99967 270 aaPredicted RBP8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 CABLES2Q9BTV7 478 aa8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 C11orf54Q9H0W9 315 aaPredicted RBP8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 TNCP24821 2201 aa8.7□□□□□ -1.02
SHKBP1-206ENST00000595523 DNAH3Q8TD57 4116 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 IGKV1D-8A0A087WSZ0 117 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 LINC01548A6NM66 108 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 SERPINE3A8MV23 424 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 FABP7O15540 132 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 AIREO43918 545 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 IGHG2P01859 326 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 GSTT2P0CG29 244 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 GSTT2BP0CG30 244 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 ZBTB25P24278 435 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 F2RL1P55085 397 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 LSM3P62310 102 aaKnown RBP8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 CDNFQ49AH0 187 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 IGSF11Q5DX21 431 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 IDNKQ5T6J7 187 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 FAM71F2Q6NXP2 309 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 FAM71E2Q8N5Q1 922 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 OR5AU1Q8NGC0 362 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 OR4A4PQ8NGN8 299 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 NOL4LQ96MY1 436 aaPredicted RBP8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 S1PR3Q99500 378 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 TOLLIPQ9H0E2 274 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 MMP27Q9H306 513 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 RHBDL2Q9NX52 303 aa8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 PRKDCP78527 4128 aaKnown RBP8.69□□□□□ -1.02
SHKBP1-206ENST00000595523 TRBV6-7A0A0A0MS04 114 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 NCBP2LA6PVI3 153 aaKnown RBP8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 RAB29O14966 203 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 HSPA12AO43301 675 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 SSX5O60225 188 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 PEX14O75381 377 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 CSF1P09603 554 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 CT45A6P0DMU7 189 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 CT45A5P0DMU8 189 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 CT45A7P0DMV0 189 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 CNTFRP26992 372 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 RPS19P39019 145 aaKnown RBP8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 SCAND1P57086 179 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 CD83Q01151 205 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 TIMM50Q3ZCQ8 353 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 ZNF260Q3ZCT1 412 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 HACD4Q5VWC8 232 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 Q6ZS49 121 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 OR13F1Q8NGS4 319 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 FAM110DQ8TAY7 271 aaPredicted RBP8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 NUDCD2Q8WVJ2 157 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 FUNDC2Q9BWH2 189 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 ABCG5Q9H222 651 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 VCX3AQ9NNX9 186 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 LIN7CQ9NUP9 197 aaKnown RBP8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 RDH8Q9NYR8 311 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 PIPOXQ9P0Z9 390 aa8.68□□□□□ -1.02
SHKBP1-206ENST00000595523 TMEM235A6NFC5 223 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 BET1O15155 118 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 DIRAS3O95661 229 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 GSTP1P09211 210 aaKnown RBP8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 DTYMKP23919 212 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 GPR12P47775 334 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 LINC00205P59089 165 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 ACTBP60709 375 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 MRPS15P82914 257 aaKnown RBP8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 ARFRP1Q13795 201 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 KIR2DS1Q14954 304 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 SRSF7Q16629 238 aaKnown RBP eCLIP8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 NSUN5P1Q3KNT7 163 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 FAM131AQ6UXB0 335 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 GLDNQ6ZMI3 551 aaPredicted RBP8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 CENPVQ7Z7K6 275 aaPredicted RBP8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 NDUFA11Q86Y39 141 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 OR8H1Q8NGG4 311 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 EDARADDQ8WWZ3 215 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 C5orf30Q96GV9 206 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 HSPB9Q9BQS6 159 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 LINC00527Q9UJ94 153 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 RNF150Q9ULK6 438 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 ETV7Q9Y603 341 aa8.67□□□□□ -1.02
SHKBP1-206ENST00000595523 H0YJW9 148 aa8.66□□□□□ -1.02
SHKBP1-206ENST00000595523 TALDO1P37837 337 aa8.66□□□□□ -1.02
SHKBP1-206ENST00000595523 SERPINB10P48595 397 aa8.66□□□□□ -1.02
SHKBP1-206ENST00000595523 NCS1P62166 190 aa8.66□□□□□ -1.02
SHKBP1-206ENST00000595523 ARL6IP1Q15041 203 aa8.66□□□□□ -1.02
SHKBP1-206ENST00000595523 MMDQ15546 238 aa8.66□□□□□ -1.02
SHKBP1-206ENST00000595523 SLC35E3Q7Z769 313 aa8.66□□□□□ -1.02
SHKBP1-206ENST00000595523 ZNF329Q86UD4 541 aa8.66□□□□□ -1.02
SHKBP1-206ENST00000595523 DRAXINQ8NBI3 349 aaPredicted RBP8.66□□□□□ -1.02
SHKBP1-206ENST00000595523 OR5AN1Q8NGI8 311 aa8.66□□□□□ -1.02
SHKBP1-206ENST00000595523 SPATA2Q9UM82 520 aa8.66□□□□□ -1.02
SHKBP1-206ENST00000595523 A0A1W2PRX2 142 aa8.65□□□□□ -1.02
SHKBP1-206ENST00000595523 PSMB11A5LHX3 300 aa8.65□□□□□ -1.02
SHKBP1-206ENST00000595523 OR5H14A6NHG9 310 aa8.65□□□□□ -1.02
SHKBP1-206ENST00000595523 SCGNO76038 276 aa8.65□□□□□ -1.02
SHKBP1-206ENST00000595523 NDUFA3O95167 84 aa8.65□□□□□ -1.02
SHKBP1-206ENST00000595523 VBP1P61758 197 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms