RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 OR5H14A6NHG9 310 aa14.02□□□□□ -0.17
SHKBP1-204ENST00000594862 TRDCB7Z8K6 153 aa14.02□□□□□ -0.17
SHKBP1-204ENST00000594862 OR5H8P0DN80 308 aa14.02□□□□□ -0.17
SHKBP1-204ENST00000594862 MC5RP33032 325 aa14.02□□□□□ -0.17
SHKBP1-204ENST00000594862 MMDQ15546 238 aa14.02□□□□□ -0.17
SHKBP1-204ENST00000594862 PLAC9Q5JTB6 97 aa14.02□□□□□ -0.17
SHKBP1-204ENST00000594862 HIST2H2BDQ6DRA6 164 aa14.02□□□□□ -0.17
SHKBP1-204ENST00000594862 Q6ZPA2 131 aa14.02□□□□□ -0.17
SHKBP1-204ENST00000594862 OR4A4PQ8NGN8 299 aa14.02□□□□□ -0.17
SHKBP1-204ENST00000594862 CYYR1Q96J86 154 aa14.02□□□□□ -0.17
SHKBP1-204ENST00000594862 ZNF251Q9BRH9 671 aa14.02□□□□□ -0.17
SHKBP1-204ENST00000594862 CHCHD6Q9BRQ6 235 aa14.02□□□□□ -0.17
SHKBP1-204ENST00000594862 HDHD3Q9BSH5 251 aaPredicted RBP14.02□□□□□ -0.17
SHKBP1-204ENST00000594862 MRPL20Q9BYC9 149 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-204ENST00000594862 PLSCR3Q9NRY6 295 aa14.02□□□□□ -0.17
SHKBP1-204ENST00000594862 ZNF736B4DX44 427 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-204ENST00000594862 ST8SIA5O15466 376 aa14.01□□□□□ -0.17
SHKBP1-204ENST00000594862 HIST1H1DP16402 221 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-204ENST00000594862 CEACAM6P40199 344 aa14.01□□□□□ -0.17
SHKBP1-204ENST00000594862 ACTBP60709 375 aa14.01□□□□□ -0.17
SHKBP1-204ENST00000594862 KPRPQ5T749 579 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-204ENST00000594862 SAMD5Q5TGI4 173 aa14.01□□□□□ -0.17
SHKBP1-204ENST00000594862 TEX38Q6PEX7 206 aa14.01□□□□□ -0.17
SHKBP1-204ENST00000594862 KCTD7Q96MP8 289 aa14.01□□□□□ -0.17
SHKBP1-204ENST00000594862 MFNGO00587 321 aa14□□□□□ -0.17
SHKBP1-204ENST00000594862 NBR2O15453 112 aa14□□□□□ -0.17
SHKBP1-204ENST00000594862 RBBP9O75884 186 aa14□□□□□ -0.17
SHKBP1-204ENST00000594862 CD33P20138 364 aa14□□□□□ -0.17
SHKBP1-204ENST00000594862 OR3A3P47888 321 aa14□□□□□ -0.17
SHKBP1-204ENST00000594862 SCAND1P57086 179 aa14□□□□□ -0.17
SHKBP1-204ENST00000594862 REC114Q7Z4M0 266 aa14□□□□□ -0.17
SHKBP1-204ENST00000594862 ZNF329Q86UD4 541 aa14□□□□□ -0.17
SHKBP1-204ENST00000594862 NOL4LQ96MY1 436 aaPredicted RBP14□□□□□ -0.17
SHKBP1-204ENST00000594862 VCX3AQ9NNX9 186 aa14□□□□□ -0.17
SHKBP1-204ENST00000594862 KIAA1456Q9P272 454 aa14□□□□□ -0.17
SHKBP1-204ENST00000594862 ZNF107Q9UII5 783 aaPredicted RBP14□□□□□ -0.17
SHKBP1-204ENST00000594862 ZNF221Q9UK13 617 aa14□□□□□ -0.17
SHKBP1-204ENST00000594862 PLXNB1O43157 2135 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 RAB27BO00194 218 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 FABP7O15540 132 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 TMEM127O75204 238 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 DUS4LO95620 317 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 HLA-DRB1P01911 266 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 FCGR3AP08637 254 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 SCTP09683 121 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 VDAC1P21796 283 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 TALDO1P37837 337 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 RPL23AP62750 156 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 ARFRP1Q13795 201 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 SRSF7Q16629 238 aaKnown RBP eCLIP13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 PNLIPRP3Q17RR3 467 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 BEAN1Q3B7T3 259 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 TIMM50Q3ZCQ8 353 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 C10orf99Q6UWK7 81 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 C5orf24Q7Z6I8 188 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 WFDC9Q8NEX5 89 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 AGMATQ9BSE5 352 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 TOLLIPQ9H0E2 274 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 C11orf54Q9H0W9 315 aaPredicted RBP13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 ATG5Q9H1Y0 275 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 OR1A1Q9P1Q5 309 aa13.99□□□□□ -0.17
SHKBP1-204ENST00000594862 IGF1P05019 195 aa13.98□□□□□ -0.17
SHKBP1-204ENST00000594862 ELANEP08246 267 aa13.98□□□□□ -0.17
SHKBP1-204ENST00000594862 F2RL1P55085 397 aa13.98□□□□□ -0.17
SHKBP1-204ENST00000594862 FOXE3Q13461 319 aa13.98□□□□□ -0.17
SHKBP1-204ENST00000594862 CXorf66Q5JRM2 361 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-204ENST00000594862 C1QL4Q86Z23 238 aa13.98□□□□□ -0.17
SHKBP1-204ENST00000594862 NPBQ8NG41 125 aa13.98□□□□□ -0.17
SHKBP1-204ENST00000594862 OR10J5Q8NHC4 309 aa13.98□□□□□ -0.17
SHKBP1-204ENST00000594862 RNF5Q99942 180 aa13.98□□□□□ -0.17
SHKBP1-204ENST00000594862 CABLES2Q9BTV7 478 aa13.98□□□□□ -0.17
SHKBP1-204ENST00000594862 GPR61Q9BZJ8 451 aa13.98□□□□□ -0.17
SHKBP1-204ENST00000594862 KCNK7Q9Y2U2 307 aa13.98□□□□□ -0.17
SHKBP1-204ENST00000594862 WASHC3Q9Y3C0 194 aa13.98□□□□□ -0.17
SHKBP1-204ENST00000594862 NUDT19A8MXV4 375 aa13.97□□□□□ -0.17
SHKBP1-204ENST00000594862 G3V4G9 280 aa13.97□□□□□ -0.17
SHKBP1-204ENST00000594862 NDUFA3O95167 84 aa13.97□□□□□ -0.17
SHKBP1-204ENST00000594862 DTYMKP23919 212 aa13.97□□□□□ -0.17
SHKBP1-204ENST00000594862 PITPNAQ00169 270 aa13.97□□□□□ -0.17
SHKBP1-204ENST00000594862 PLA2G7Q13093 441 aa13.97□□□□□ -0.17
SHKBP1-204ENST00000594862 NEDD8Q15843 81 aa13.97□□□□□ -0.17
SHKBP1-204ENST00000594862 MOGAT2Q3SYC2 334 aa13.97□□□□□ -0.17
SHKBP1-204ENST00000594862 SFXN4Q6P4A7 337 aa13.97□□□□□ -0.17
SHKBP1-204ENST00000594862 FAM131AQ6UXB0 335 aa13.97□□□□□ -0.17
SHKBP1-204ENST00000594862 Q6ZS49 121 aa13.97□□□□□ -0.17
SHKBP1-204ENST00000594862 NR2C2APQ86WQ0 139 aa13.97□□□□□ -0.17
SHKBP1-204ENST00000594862 OR5AN1Q8NGI8 311 aa13.97□□□□□ -0.17
SHKBP1-204ENST00000594862 RCC1LQ96I51 464 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-204ENST00000594862 ABHD14BQ96IU4 210 aa13.97□□□□□ -0.17
SHKBP1-204ENST00000594862 RDH8Q9NYR8 311 aa13.97□□□□□ -0.17
SHKBP1-204ENST00000594862 ETV7Q9Y603 341 aa13.97□□□□□ -0.17
SHKBP1-204ENST00000594862 A0A075B6Q4 140 aa13.96□□□□□ -0.17
SHKBP1-204ENST00000594862 H7C2Y5 167 aa13.96□□□□□ -0.17
SHKBP1-204ENST00000594862 TNFAIP8O95379 198 aa13.96□□□□□ -0.17
SHKBP1-204ENST00000594862 APOA2P02652 100 aa13.96□□□□□ -0.17
SHKBP1-204ENST00000594862 GSTP1P09211 210 aaKnown RBP13.96□□□□□ -0.17
SHKBP1-204ENST00000594862 SLC2A2P11168 524 aaPredicted RBP13.96□□□□□ -0.17
SHKBP1-204ENST00000594862 GNB3P16520 340 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms