RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 SLC25A24Q6NUK1 477 aa13.09□□□□□ -0.31
PNKP-204ENST00000594661 ZCCHC14Q8WYQ9 949 aaKnown RBP13.09□□□□□ -0.31
PNKP-204ENST00000594661 GMPPAQ96IJ6 420 aaPredicted RBP13.09□□□□□ -0.31
PNKP-204ENST00000594661 C1QTNF5Q9BXJ0 243 aa13.09□□□□□ -0.31
PNKP-204ENST00000594661 GP6Q9HCN6 339 aa13.09□□□□□ -0.31
PNKP-204ENST00000594661 ZNF391Q9UJN7 358 aa13.09□□□□□ -0.31
PNKP-204ENST00000594661 SPTBN2O15020 2390 aa13.08□□□□□ -0.32
PNKP-204ENST00000594661 hCG_38984A0A1B0GV85 526 aa13.08□□□□□ -0.32
PNKP-204ENST00000594661 ANGPTL7O43827 346 aa13.08□□□□□ -0.32
PNKP-204ENST00000594661 YPEL1O60688 119 aa13.08□□□□□ -0.32
PNKP-204ENST00000594661 SS18L1O75177 396 aaPredicted RBP13.08□□□□□ -0.32
PNKP-204ENST00000594661 NDUFB8O95169 186 aa13.08□□□□□ -0.32
PNKP-204ENST00000594661 SCGB1D2O95969 90 aa13.08□□□□□ -0.32
PNKP-204ENST00000594661 TOMM40O96008 361 aa13.08□□□□□ -0.32
PNKP-204ENST00000594661 CCNOP22674 350 aa13.08□□□□□ -0.32
PNKP-204ENST00000594661 RPL23AP62750 156 aaKnown RBP13.08□□□□□ -0.32
PNKP-204ENST00000594661 IL13RA2Q14627 380 aa13.08□□□□□ -0.32
PNKP-204ENST00000594661 BATFQ16520 125 aa13.08□□□□□ -0.32
PNKP-204ENST00000594661 IGFL3Q6UXB1 125 aa13.08□□□□□ -0.32
PNKP-204ENST00000594661 MRPL24Q96A35 216 aaKnown RBP13.08□□□□□ -0.32
PNKP-204ENST00000594661 YPEL2Q96QA6 119 aa13.08□□□□□ -0.32
PNKP-204ENST00000594661 IMMP2LQ96T52 175 aa13.08□□□□□ -0.32
PNKP-204ENST00000594661 ALKBH7Q9BT30 221 aaPredicted RBP13.08□□□□□ -0.32
PNKP-204ENST00000594661 RBKSQ9H477 322 aa13.08□□□□□ -0.32
PNKP-204ENST00000594661 DOCK7Q96N67 2140 aa13.08□□□□□ -0.32
PNKP-204ENST00000594661 TRAV39A0A0B4J263 110 aa13.07□□□□□ -0.32
PNKP-204ENST00000594661 ZNF705FA8MVS1 300 aaPredicted RBP13.07□□□□□ -0.32
PNKP-204ENST00000594661 SPRY1O43609 319 aaPredicted RBP13.07□□□□□ -0.32
PNKP-204ENST00000594661 NRASP01111 189 aa13.07□□□□□ -0.32
PNKP-204ENST00000594661 HBE1P02100 147 aa13.07□□□□□ -0.32
PNKP-204ENST00000594661 ZNF705DP0CH99 300 aaPredicted RBP13.07□□□□□ -0.32
PNKP-204ENST00000594661 ZNF705BP0CI00 300 aaPredicted RBP13.07□□□□□ -0.32
PNKP-204ENST00000594661 COLCA1Q6ZS62 124 aa13.07□□□□□ -0.32
PNKP-204ENST00000594661 LYG1Q8N1E2 194 aa13.07□□□□□ -0.32
PNKP-204ENST00000594661 OR1K1Q8NGR3 316 aa13.07□□□□□ -0.32
PNKP-204ENST00000594661 BORCS8Q96FH0 119 aa13.07□□□□□ -0.32
PNKP-204ENST00000594661 PARD6GQ9BYG4 376 aaPredicted RBP13.07□□□□□ -0.32
PNKP-204ENST00000594661 IGKV1-27A0A075B6S5 117 aa13.07□□□□□ -0.32
PNKP-204ENST00000594661 LOC105371242A0A075B767 164 aa13.07□□□□□ -0.32
PNKP-204ENST00000594661 C5orf49A4QMS7 147 aa13.07□□□□□ -0.32
PNKP-204ENST00000594661 SERPINE3A8MV23 424 aa13.07□□□□□ -0.32
PNKP-204ENST00000594661 K7EM74 188 aa13.07□□□□□ -0.32
PNKP-204ENST00000594661 ATP6V0CP27449 155 aa13.07□□□□□ -0.32
PNKP-204ENST00000594661 SNU13P55769 128 aaKnown RBP13.07□□□□□ -0.32
PNKP-204ENST00000594661 UBE2V1Q13404 147 aa13.07□□□□□ -0.32
PNKP-204ENST00000594661 C6orf201Q7Z4U5 140 aa13.07□□□□□ -0.32
PNKP-204ENST00000594661 CSNK2A3Q8NEV1 391 aa13.07□□□□□ -0.32
PNKP-204ENST00000594661 LAMP3Q9UQV4 416 aa13.07□□□□□ -0.32
PNKP-204ENST00000594661 C14orf166Q9Y224 244 aaKnown RBP13.07□□□□□ -0.32
PNKP-204ENST00000594661 GNB2P62879 340 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 IL24Q13007 206 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 ARL6IP1Q15041 203 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 TMEM42Q69YG0 159 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 LHFPL2Q6ZUX7 228 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 CENPVQ7Z7K6 275 aaPredicted RBP13.06□□□□□ -0.32
PNKP-204ENST00000594661 BCL2L2Q92843 193 aaPredicted RBP13.06□□□□□ -0.32
PNKP-204ENST00000594661 SPSB4Q96A44 273 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 SARAFQ96BY9 339 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 Q96M66 194 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 TECTBQ96PL2 329 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 PLEKHJ1Q9NW61 149 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 DMXL2Q8TDJ6 3036 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 IFNL4K9M1U5 179 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 XRCC2O43543 280 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 KNG1P01042 644 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 ARR3P36575 388 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 TAS2R46P59540 309 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 CHD3Q12873 2000 aaKnown RBP13.06□□□□□ -0.32
PNKP-204ENST00000594661 ZNF266Q14584 549 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 GUSBP1Q15486 140 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 OR8B8Q15620 311 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 MS4A10Q96PG2 267 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 PCGF1Q9BSM1 259 aa13.06□□□□□ -0.32
PNKP-204ENST00000594661 ZNF701Q9NV72 531 aaPredicted RBP13.06□□□□□ -0.32
PNKP-204ENST00000594661 TRAV1-1A0A0B4J248 108 aa13.05□□□□□ -0.32
PNKP-204ENST00000594661 DLL1O00548 723 aa13.05□□□□□ -0.32
PNKP-204ENST00000594661 SDCBPO00560 298 aaPredicted RBP13.05□□□□□ -0.32
PNKP-204ENST00000594661 GZMHP20718 246 aa13.05□□□□□ -0.32
PNKP-204ENST00000594661 WNT5AP41221 380 aa13.05□□□□□ -0.32
PNKP-204ENST00000594661 NHLH1Q02575 133 aa13.05□□□□□ -0.32
PNKP-204ENST00000594661 TMEM183BQ1AE95 376 aa13.05□□□□□ -0.32
PNKP-204ENST00000594661 DPPA3Q6W0C5 159 aa13.05□□□□□ -0.32
PNKP-204ENST00000594661 Q6ZS92 163 aa13.05□□□□□ -0.32
PNKP-204ENST00000594661 LINC01551Q86U37 167 aa13.05□□□□□ -0.32
PNKP-204ENST00000594661 C9orf106Q8NAJ2 232 aa13.05□□□□□ -0.32
PNKP-204ENST00000594661 OR2D3Q8NGH3 330 aa13.05□□□□□ -0.32
PNKP-204ENST00000594661 OR1L6Q8NGR2 347 aa13.05□□□□□ -0.32
PNKP-204ENST00000594661 PIGCQ92535 297 aa13.05□□□□□ -0.32
PNKP-204ENST00000594661 MOB3AQ96BX8 217 aa13.05□□□□□ -0.32
PNKP-204ENST00000594661 POM121L2Q96KW2 1035 aa13.05□□□□□ -0.32
PNKP-204ENST00000594661 CISD1Q9NZ45 108 aaKnown RBP13.05□□□□□ -0.32
PNKP-204ENST00000594661 EHFQ9NZC4 300 aa13.05□□□□□ -0.32
PNKP-204ENST00000594661 RNF150Q9ULK6 438 aa13.05□□□□□ -0.32
PNKP-204ENST00000594661 CRYM-AS1A6NIL9 109 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 TMEM238C9JI98 176 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 CD55P08174 381 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 ECI1P42126 302 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 RAB11AP62491 216 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 PLCXD3Q63HM9 321 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 RTL6Q6ICC9 239 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms