RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 OR5R1Q8NH85 324 aa13.94□□□□□ -0.18
LIG1-206ENST00000594067 CHD3Q12873 2000 aaKnown RBP13.94□□□□□ -0.18
LIG1-206ENST00000594067 ESPL1Q14674 2120 aa13.94□□□□□ -0.18
LIG1-206ENST00000594067 SPANXN5Q5MJ07 72 aa13.94□□□□□ -0.18
LIG1-206ENST00000594067 WDR25Q64LD2 544 aaPredicted RBP13.94□□□□□ -0.18
LIG1-206ENST00000594067 C1orf210Q8IVY1 113 aa13.94□□□□□ -0.18
LIG1-206ENST00000594067 A0A1W2PNU3 283 aaPredicted RBP13.93□□□□□ -0.18
LIG1-206ENST00000594067 PLA2G5P39877 138 aa13.93□□□□□ -0.18
LIG1-206ENST00000594067 MEOX1P50221 254 aa13.93□□□□□ -0.18
LIG1-206ENST00000594067 HNF4GQ14541 408 aa13.93□□□□□ -0.18
LIG1-206ENST00000594067 DMRTC2Q8IXT2 367 aaPredicted RBP13.93□□□□□ -0.18
LIG1-206ENST00000594067 TMEM183AQ8IXX5 376 aa13.93□□□□□ -0.18
LIG1-206ENST00000594067 LILRB2Q8N423 598 aa13.93□□□□□ -0.18
LIG1-206ENST00000594067 OR10A7Q8NGE5 316 aa13.93□□□□□ -0.18
LIG1-206ENST00000594067 CTDSP1Q9GZU7 261 aa13.93□□□□□ -0.18
LIG1-206ENST00000594067 NPIPB11E5RHQ5 1161 aa13.93□□□□□ -0.18
LIG1-206ENST00000594067 CD55P08174 381 aa13.93□□□□□ -0.18
LIG1-206ENST00000594067 CEACAM6P40199 344 aa13.93□□□□□ -0.18
LIG1-206ENST00000594067 JOSD1Q15040 202 aaPredicted RBP13.93□□□□□ -0.18
LIG1-206ENST00000594067 ZNF497Q6ZNH5 498 aa13.93□□□□□ -0.18
LIG1-206ENST00000594067 SCCPDHQ8NBX0 429 aa13.93□□□□□ -0.18
LIG1-206ENST00000594067 BCL2L2Q92843 193 aaPredicted RBP13.93□□□□□ -0.18
LIG1-206ENST00000594067 PSMG3Q9BT73 122 aaPredicted RBP13.93□□□□□ -0.18
LIG1-206ENST00000594067 VAX2Q9UIW0 290 aa13.93□□□□□ -0.18
LIG1-206ENST00000594067 COL27A1Q8IZC6 1860 aaPredicted RBP13.93□□□□□ -0.18
LIG1-206ENST00000594067 KIAA2026Q5HYC2 2103 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 CEBPZOSA8MTT3 80 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 CELA3BP08861 270 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 ELLP55199 621 aaPredicted RBP13.92□□□□□ -0.18
LIG1-206ENST00000594067 MRGPRGQ86SM5 289 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 DDA1Q9BW61 102 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 RTL8AQ9BWD3 113 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 DEFB127Q9H1M4 99 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 RNF150Q9ULK6 438 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 KMT2EQ8IZD2 1858 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 ZDBF2Q9HCK1 2354 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 PIGBOS1A0A0B4J2F0 54 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 LRP5LA4QPB2 252 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 CDIPTO14735 213 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 PFN1P07737 140 aaKnown RBP13.92□□□□□ -0.18
LIG1-206ENST00000594067 SELEP16581 610 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 MDH2P40926 338 aaKnown RBP13.92□□□□□ -0.18
LIG1-206ENST00000594067 ERVS71-1P61550 626 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 ACSF3Q4G176 576 aaPredicted RBP13.92□□□□□ -0.18
LIG1-206ENST00000594067 DRAM1Q8N682 238 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 OR4C12Q96R67 309 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 GPR87Q9BY21 358 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 SRD5A3Q9H8P0 318 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 GP6Q9HCN6 339 aa13.92□□□□□ -0.18
LIG1-206ENST00000594067 LIN7CQ9NUP9 197 aaKnown RBP13.92□□□□□ -0.18
LIG1-206ENST00000594067 DVL1O14640 695 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 SLC31A2O15432 143 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 AMBPP02760 352 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 WNT2P09544 360 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 GZMBP10144 247 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 SELLP14151 372 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 NDUFB7P17568 137 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 SERF2P84101 59 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 LRRC75BQ2VPJ9 315 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 ALKBH6Q3KRA9 238 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 MED12LQ86YW9 2145 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 RNASEH2CQ8TDP1 164 aaKnown RBP13.91□□□□□ -0.18
LIG1-206ENST00000594067 PYGO2Q9BRQ0 406 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 OR2J1Q9GZK6 312 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 RBKSQ9H477 322 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 TMEM9BQ9NQ34 198 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 MKRN2OSH3BPM6 223 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 NXPH2O95156 264 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 CEBPDP49716 269 aaPredicted RBP13.91□□□□□ -0.18
LIG1-206ENST00000594067 TAS2R60P59551 318 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 HBG1P69891 147 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 HBG2P69892 147 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 COL10A1Q03692 680 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 MOB1BQ7L9L4 216 aa13.91□□□□□ -0.18
LIG1-206ENST00000594067 SP1P08047 785 aa13.9□□□□□ -0.18
LIG1-206ENST00000594067 FBXW9Q5XUX1 488 aa13.9□□□□□ -0.18
LIG1-206ENST00000594067 OR8G2PQ6IF36 304 aa13.9□□□□□ -0.18
LIG1-206ENST00000594067 BEND4Q6ZU67 534 aa13.9□□□□□ -0.18
LIG1-206ENST00000594067 FGFRL1Q8N441 504 aa13.9□□□□□ -0.18
LIG1-206ENST00000594067 NANOS1Q8WY41 292 aaKnown RBP13.9□□□□□ -0.18
LIG1-206ENST00000594067 WDR61Q9GZS3 305 aaKnown RBP13.9□□□□□ -0.18
LIG1-206ENST00000594067 IL17BQ9UHF5 180 aa13.9□□□□□ -0.18
LIG1-206ENST00000594067 UBE2L5PA0A1B0GUS4 154 aa13.9□□□□□ -0.18
LIG1-206ENST00000594067 ST8SIA5O15466 376 aa13.9□□□□□ -0.18
LIG1-206ENST00000594067 FOSL1P15407 271 aa13.9□□□□□ -0.18
LIG1-206ENST00000594067 Q3ZCU0 254 aa13.9□□□□□ -0.18
LIG1-206ENST00000594067 FAM53AQ6NSI3 398 aaPredicted RBP13.9□□□□□ -0.18
LIG1-206ENST00000594067 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.9□□□□□ -0.18
LIG1-206ENST00000594067 GRPP07492 148 aa13.89□□□□□ -0.19
LIG1-206ENST00000594067 ERVK11-1P61568 191 aa13.89□□□□□ -0.19
LIG1-206ENST00000594067 SLC10A1Q14973 349 aa13.89□□□□□ -0.19
LIG1-206ENST00000594067 TBC1D28Q2M2D7 210 aa13.89□□□□□ -0.19
LIG1-206ENST00000594067 MISP3Q96FF7 219 aa13.89□□□□□ -0.19
LIG1-206ENST00000594067 NAT8Q9UHE5 227 aa13.89□□□□□ -0.19
LIG1-206ENST00000594067 MED13Q9UHV7 2174 aa13.89□□□□□ -0.19
LIG1-206ENST00000594067 MAP1LC3B2A6NCE7 125 aa13.89□□□□□ -0.19
LIG1-206ENST00000594067 C19orf67A6NJJ6 358 aa13.89□□□□□ -0.19
LIG1-206ENST00000594067 A8MWP6 167 aa13.89□□□□□ -0.19
LIG1-206ENST00000594067 ZNF737O75373 536 aa13.89□□□□□ -0.19
LIG1-206ENST00000594067 CLDN1O95832 211 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms