RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 FAM234AQ9H0X4 552 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 NAGKQ9UJ70 344 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 PTRH2Q9Y3E5 179 aaKnown RBP12.17□□□□□ -0.46
CIRBP-242ENST00000593093 KIR2DS1A0A191URI9 304 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 GCGP01275 180 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 KIR2DS4P43632 304 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 RAB7AP51149 207 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 HIST1H3AP68431 136 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 PRDX4Q13162 271 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 KIR2DS1Q14954 304 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 SYT13Q7L8C5 426 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 TMEM56Q96MV1 263 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 CTDSP1Q9GZU7 261 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 TMEM56-RWDD3S4R434 201 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 CEP250Q9BV73 2442 aa12.17□□□□□ -0.46
CIRBP-242ENST00000593093 HRASP01112 189 aa12.16□□□□□ -0.46
CIRBP-242ENST00000593093 EDDM3BP56851 147 aa12.16□□□□□ -0.46
CIRBP-242ENST00000593093 SMIM15Q7Z3B0 74 aa12.16□□□□□ -0.46
CIRBP-242ENST00000593093 SMPD2O60906 423 aa12.16□□□□□ -0.46
CIRBP-242ENST00000593093 CD27P26842 260 aa12.16□□□□□ -0.46
CIRBP-242ENST00000593093 CHRNB4P30926 498 aa12.16□□□□□ -0.46
CIRBP-242ENST00000593093 ZFP36L1Q07352 338 aaKnown RBP12.16□□□□□ -0.46
CIRBP-242ENST00000593093 TDRG1Q3Y452 100 aa12.16□□□□□ -0.46
CIRBP-242ENST00000593093 ZNF525Q8N782 197 aa12.16□□□□□ -0.46
CIRBP-242ENST00000593093 NFAM1Q8NET5 270 aaPredicted RBP12.16□□□□□ -0.46
CIRBP-242ENST00000593093 ABHD3Q8WU67 409 aa12.16□□□□□ -0.46
CIRBP-242ENST00000593093 ADAMTS9Q9P2N4 1935 aa12.16□□□□□ -0.46
CIRBP-242ENST00000593093 NDUFB4O95168 129 aa12.16□□□□□ -0.46
CIRBP-242ENST00000593093 UCP1P25874 307 aa12.16□□□□□ -0.46
CIRBP-242ENST00000593093 PTGDSP41222 190 aa12.16□□□□□ -0.46
CIRBP-242ENST00000593093 SLC35B1P78383 322 aa12.16□□□□□ -0.46
CIRBP-242ENST00000593093 FAM27BQ5VT28 67 aa12.16□□□□□ -0.46
CIRBP-242ENST00000593093 SGMS2Q8NHU3 365 aa12.16□□□□□ -0.46
CIRBP-242ENST00000593093 PLPPR1Q8TBJ4 325 aa12.16□□□□□ -0.46
CIRBP-242ENST00000593093 IFI44Q8TCB0 444 aa12.16□□□□□ -0.46
CIRBP-242ENST00000593093 TAF15Q92804 592 aaKnown RBP eCLIP12.16□□□□□ -0.46
CIRBP-242ENST00000593093 RYDENQ9NUL5 291 aaKnown RBP12.16□□□□□ -0.46
CIRBP-242ENST00000593093 TTC28Q96AY4 2481 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 IGHV1OR15-9A0A0B4J2B8 117 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 TMEM210A6NLX4 147 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 C11orf94C9JXX5 98 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 M0QZ24 198 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 NUPR1O60356 82 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 IGKV1D-33P01593 117 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 IGKV1-33P01594 117 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 PFN1P07737 140 aaKnown RBP12.15□□□□□ -0.46
CIRBP-242ENST00000593093 GCH1P30793 250 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 RND2P52198 227 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 C20orf204Q6ZNR8 217 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 DERL1Q9BUN8 251 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 PRRG4Q9BZD6 226 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 IGKV1-6A0A0C4DH72 117 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 PIAS2O75928 621 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 KBTBD11O94819 623 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 HPRT1P00492 218 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 WIPI1Q5MNZ9 446 aaPredicted RBP12.15□□□□□ -0.46
CIRBP-242ENST00000593093 BTF3L4Q96K17 158 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 GAL3ST2Q9H3Q3 398 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 CRIM1Q9NZV1 1036 aa12.15□□□□□ -0.46
CIRBP-242ENST00000593093 LOC102725191A0A1B0GVB3 256 aa12.15□□□□□ -0.47
CIRBP-242ENST00000593093 A0A1W2PPV4 95 aa12.15□□□□□ -0.47
CIRBP-242ENST00000593093 A8MXE2 369 aa12.15□□□□□ -0.47
CIRBP-242ENST00000593093 C1QTNF9P0C862 333 aa12.15□□□□□ -0.47
CIRBP-242ENST00000593093 G6PCP35575 357 aa12.15□□□□□ -0.47
CIRBP-242ENST00000593093 PPP1CBP62140 327 aa12.15□□□□□ -0.47
CIRBP-242ENST00000593093 HSPB9Q9BQS6 159 aa12.15□□□□□ -0.47
CIRBP-242ENST00000593093 CDH20Q9HBT6 801 aa12.15□□□□□ -0.47
CIRBP-242ENST00000593093 ZNF318Q5VUA4 2279 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 TRAV38-1A0A0B4J264 116 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 IGHV3-13P01766 116 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 IGHV3-7P01780 117 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 NTF4P34130 210 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 CEACAM6P40199 344 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 KCNMB1Q16558 191 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 GCSAMLQ5JQS6 135 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 RHBDD2Q6NTF9 364 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 OR8G5Q8NG78 346 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 MANBALQ9NQG1 85 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 C19orf25Q9UFG5 118 aaPredicted RBP12.14□□□□□ -0.47
CIRBP-242ENST00000593093 ROS1P08922 2347 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 M0QZK8 103 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 GGCTO75223 188 aaKnown RBP12.14□□□□□ -0.47
CIRBP-242ENST00000593093 ACOT6Q3I5F7 207 aaPredicted RBP12.14□□□□□ -0.47
CIRBP-242ENST00000593093 CYP2G1PQ6ZSU1 146 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 ZNF573Q86YE8 665 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 CMTM2Q8TAZ6 248 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 ACTR3CQ9C0K3 210 aaPredicted RBP12.14□□□□□ -0.47
CIRBP-242ENST00000593093 OR2J1Q9GZK6 312 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 PI4KAP42356 2102 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 SYNGR3O43761 229 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 NGFP01138 241 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 CBLN1P23435 193 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 ARF1P84077 181 aaKnown RBP12.14□□□□□ -0.47
CIRBP-242ENST00000593093 ZNF90Q03938 601 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 GAGE1Q13065 139 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 ACSM6Q6P461 480 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 OR4C5Q8NGB2 326 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 OR2H1Q9GZK4 316 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 TMEM38BQ9NVV0 291 aa12.14□□□□□ -0.47
CIRBP-242ENST00000593093 POLR3KQ9Y2Y1 108 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms