RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 BAMBIQ13145 260 aa7.8□□□□□ -1.16
DDX39A-220ENST00000593008 SRSF7Q16629 238 aaKnown RBP eCLIP7.8□□□□□ -1.16
DDX39A-220ENST00000593008 HLA-DRB5Q30154 266 aa7.8□□□□□ -1.16
DDX39A-220ENST00000593008 DEFB112Q30KQ8 113 aa7.8□□□□□ -1.16
DDX39A-220ENST00000593008 TRIQKQ629K1 86 aa7.8□□□□□ -1.16
DDX39A-220ENST00000593008 STEAP3Q658P3 488 aa7.8□□□□□ -1.16
DDX39A-220ENST00000593008 ZNF626Q68DY1 528 aa7.8□□□□□ -1.16
DDX39A-220ENST00000593008 STEAP1BQ6NZ63 245 aa7.8□□□□□ -1.16
DDX39A-220ENST00000593008 OVCH2Q7RTZ1 564 aa7.8□□□□□ -1.16
DDX39A-220ENST00000593008 TMEM17Q86X19 198 aa7.8□□□□□ -1.16
DDX39A-220ENST00000593008 GDPD1Q8N9F7 314 aa7.8□□□□□ -1.16
DDX39A-220ENST00000593008 TMEM229BQ8NBD8 167 aa7.8□□□□□ -1.16
DDX39A-220ENST00000593008 OR8U1Q8NH10 309 aa7.8□□□□□ -1.16
DDX39A-220ENST00000593008 TAF15Q92804 592 aaKnown RBP eCLIP7.8□□□□□ -1.16
DDX39A-220ENST00000593008 JMJD8Q96S16 334 aa7.8□□□□□ -1.16
DDX39A-220ENST00000593008 TSC22D3Q99576 134 aa7.8□□□□□ -1.16
DDX39A-220ENST00000593008 ZNF2Q9BSG1 426 aaPredicted RBP7.8□□□□□ -1.16
DDX39A-220ENST00000593008 WDR12Q9GZL7 423 aaKnown RBP7.8□□□□□ -1.16
DDX39A-220ENST00000593008 UNKLQ9H9P5 680 aaKnown RBP7.8□□□□□ -1.16
DDX39A-220ENST00000593008 HRASLSQ9HDD0 168 aa7.8□□□□□ -1.16
DDX39A-220ENST00000593008 TNFRSF19Q9NS68 423 aa7.8□□□□□ -1.16
DDX39A-220ENST00000593008 MGAT4AQ9UM21 535 aa7.8□□□□□ -1.16
DDX39A-220ENST00000593008 PROP1O75360 226 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 UPK1BO75841 260 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 RAB3DO95716 219 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 PPYP01298 95 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 IGLV2-14P01704 120 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 AMY2AP04746 511 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 CSF1P09603 554 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 PI3P19957 117 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 CD24P25063 80 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 PTBP1P26599 531 aaKnown RBP eCLIP7.79□□□□□ -1.16
DDX39A-220ENST00000593008 CCR6P51684 374 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 TAS2R19P59542 299 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 DYRK1AQ13627 763 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 SCGB2B2Q4G0G5 96 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 RNASE10Q5GAN6 216 aaKnown RBP7.79□□□□□ -1.16
DDX39A-220ENST00000593008 VAX1Q5SQQ9 334 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 AADACL3Q5VUY0 350 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 GLDNQ6ZMI3 551 aaPredicted RBP7.79□□□□□ -1.16
DDX39A-220ENST00000593008 LINC00299Q6ZSB3 139 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 SLC25A48Q6ZT89 311 aaKnown RBP7.79□□□□□ -1.16
DDX39A-220ENST00000593008 ZNF554Q86TJ5 538 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 LYG1Q8N1E2 194 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 DRAXINQ8NBI3 349 aaPredicted RBP7.79□□□□□ -1.16
DDX39A-220ENST00000593008 OR2AK2Q8NG84 335 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 OR11H6Q8NGC7 330 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 OR51S1Q8NGJ8 323 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 OR13C8Q8NGS7 320 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 OR13D1Q8NGV5 346 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 OR9G1Q8NH87 305 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 OR10J5Q8NHC4 309 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 FAM216AQ8WUB2 273 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 S100ZQ8WXG8 99 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 TOMM40LQ969M1 308 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 ZDHHC16Q969W1 377 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 ZNF251Q9BRH9 671 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 AGMATQ9BSE5 352 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 MRPL20Q9BYC9 149 aaKnown RBP7.79□□□□□ -1.16
DDX39A-220ENST00000593008 OR2D2Q9H210 308 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 MMP28Q9H239 520 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 HEXA-AS1Q9H8Q6 139 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 CCL28Q9NRJ3 127 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 NECAP2Q9NVZ3 263 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 MCUBQ9NWR8 336 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 HILPDAQ9Y5L2 63 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 TENM1Q9UKZ4 2725 aa7.79□□□□□ -1.16
DDX39A-220ENST00000593008 ANK2Q01484 3957 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 IGHV3-72A0A0B4J1Y9 119 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 TOR1AO14656 332 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 HSD17B6O14756 317 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 HOXA3O43365 443 aaPredicted RBP7.78□□□□□ -1.16
DDX39A-220ENST00000593008 TNFSF12O43508 249 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 YPEL1O60688 119 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 AKAIN1P0CW23 69 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 ZBTB25P24278 435 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 RAB13P51153 203 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 UBE2E1P51965 193 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 TAS2R46P59540 309 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 SLC9A3R2Q15599 337 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 TUSC1Q2TAM9 212 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 Q3ZCU0 254 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 TPTE2P1Q5T6R2 138 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 NCR3LG1Q68D85 454 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 C9orf139Q6ZV77 190 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 LHFPL1Q86WI0 220 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 TOMM5Q8N4H5 51 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 OR10A7Q8NGE5 316 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 OR52M1Q8NGK5 317 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 OR10X1Q8NGY0 326 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 ZNF596Q8TC21 504 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 C15orf40Q8WUR7 153 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 ZFAND2BQ8WV99 257 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 SECTM1Q8WVN6 248 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 YPEL2Q96QA6 119 aa7.78□□□□□ -1.16
DDX39A-220ENST00000593008 A0A1W2PPI3 338 aa7.77□□□□□ -1.17
DDX39A-220ENST00000593008 LY6LH3BQJ8 138 aa7.77□□□□□ -1.17
DDX39A-220ENST00000593008 BUB1B-PAK6H3BSN5 160 aa7.77□□□□□ -1.17
DDX39A-220ENST00000593008 SPNP16150 400 aa7.77□□□□□ -1.17
DDX39A-220ENST00000593008 SSX2Q16385 188 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms