RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 GNG4P50150 75 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 GAMTQ14353 236 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 PMCHL1Q16048 86 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 HIST3H3Q16695 136 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 CXorf66Q5JRM2 361 aaPredicted RBP3.04□□□□□ -1.92
VMP1-216ENST00000592790 ETV3LQ6ZN32 361 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 MYPOPQ86VE0 399 aaPredicted RBP3.04□□□□□ -1.92
VMP1-216ENST00000592790 OR11L1Q8NGX0 322 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 GPR146Q96CH1 333 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 GNRHR2Q96P88 292 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 RPP25Q9BUL9 199 aaKnown RBP3.04□□□□□ -1.92
VMP1-216ENST00000592790 CACNA1HO95180 2353 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 COL4A3Q01955 1670 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 KIF26BQ2KJY2 2108 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 A0A087WV48 116 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 LOC101059948A0A1B0GTJ6 334 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 hCG_38984A0A1B0GV85 526 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 SLC22A20A6NK97 555 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 MKRN2OSH3BPM6 223 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 FCN1O00602 326 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 LINC01565O15544 149 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 TIMM8AO60220 97 aaPredicted RBP3.04□□□□□ -1.92
VMP1-216ENST00000592790 LINC00271P0C7V0 271 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 PSG2P11465 335 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 EPHA8P29322 1005 aaPredicted RBP3.04□□□□□ -1.92
VMP1-216ENST00000592790 RPL29P47914 159 aaKnown RBP3.04□□□□□ -1.92
VMP1-216ENST00000592790 FHITP49789 147 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 FGF8P55075 233 aaPredicted RBP3.04□□□□□ -1.92
VMP1-216ENST00000592790 MLF1P58340 268 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 PSG4Q00888 419 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 RUNX1Q01196 453 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 PMP22Q01453 160 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 TMEM30BQ3MIR4 351 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 STPG1Q5TH74 334 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 SMIM15Q7Z3B0 74 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 C17orf82Q86X59 251 aaPredicted RBP3.04□□□□□ -1.92
VMP1-216ENST00000592790 ZNF645Q8N7E2 425 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 OR2D3Q8NGH3 330 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 OR10S1Q8NGN2 331 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 TMEM190Q8WZ59 177 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 MRGPRFQ96AM1 343 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 ZNF775Q96BV0 537 aaPredicted RBP3.04□□□□□ -1.92
VMP1-216ENST00000592790 RCC1LQ96I51 464 aaKnown RBP3.04□□□□□ -1.92
VMP1-216ENST00000592790 ZNF665Q9H7R5 613 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 SEMA5BQ9P283 1151 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 RNF24Q9Y225 148 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 GOLT1BQ9Y3E0 138 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 TRBV6-6A0A0A6YYG2 114 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 IGKV1D-43A0A0B4J1Z2 117 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 A0A1W2PR77 199 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 K7EQM0 130 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 CLDN14O95500 239 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 APOA2P02652 100 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 FGF5P12034 268 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 APOBEC3AP31941 199 aaPredicted RBP3.04□□□□□ -1.92
VMP1-216ENST00000592790 OTX1P32242 354 aaPredicted RBP3.04□□□□□ -1.92
VMP1-216ENST00000592790 NPBWR2P48146 333 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 TNFRSF9Q07011 255 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 HLA-DRB5Q30154 266 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 ZNF818PQ6ZRF7 136 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 ZNF808Q8N4W9 903 aaPredicted RBP3.04□□□□□ -1.92
VMP1-216ENST00000592790 OR4S2Q8NH73 311 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 RNF166Q96A37 237 aaPredicted RBP3.04□□□□□ -1.92
VMP1-216ENST00000592790 POM121L2Q96KW2 1035 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 WFIKKN1Q96NZ8 548 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 ZNF385AQ96PM9 386 aaKnown RBP3.04□□□□□ -1.92
VMP1-216ENST00000592790 TRIB1Q96RU8 372 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 DMRTA2Q96SC8 542 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 HINT2Q9BX68 163 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 C1QTNF5Q9BXJ0 243 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 RPRMQ9NS64 109 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 TECRQ9NZ01 308 aaKnown RBP3.04□□□□□ -1.92
VMP1-216ENST00000592790 NAT8BQ9UHF3 227 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 PKD1L2Q7Z442 2459 aa3.04□□□□□ -1.92
VMP1-216ENST00000592790 FAM90A9PA6NNJ1 464 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 PAGE4O60829 102 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 HSBP1O75506 76 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 ACTL6BO94805 426 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 HLA-DQA1P01909 254 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 CT45A6P0DMU7 189 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 CT45A5P0DMU8 189 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 CT45A7P0DMV0 189 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 ZNF25P17030 456 aaPredicted RBP3.03□□□□□ -1.92
VMP1-216ENST00000592790 GZMHP20718 246 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 IL3RAP26951 378 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 CHRNA7P36544 502 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 UBE2G1P62253 170 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 CCL7P80098 99 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 ERHP84090 104 aaKnown RBP3.03□□□□□ -1.92
VMP1-216ENST00000592790 ZNF718Q3SXZ3 478 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 CT45A1Q5HYN5 189 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 ZNF880Q6PDB4 577 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 C1QL2Q7Z5L3 287 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 OR1L4Q8NGR5 311 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 CT45A3Q8NHU0 189 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 RHOVQ96L33 236 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 CXXC4Q9H2H0 198 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 PARLQ9H300 379 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 WFDC1Q9HC57 220 aa3.03□□□□□ -1.92
VMP1-216ENST00000592790 OR6C3Q9NZP0 311 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms