RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 DYRK2Q92630 601 aa11.53□□□□□ -0.56
SMARCA4-216ENST00000591545 SMIM10Q96HG1 83 aa11.53□□□□□ -0.56
SMARCA4-216ENST00000591545 WIPI2Q9Y4P8 454 aa11.53□□□□□ -0.56
SMARCA4-216ENST00000591545 MFSD2BA6NFX1 497 aa11.53□□□□□ -0.56
SMARCA4-216ENST00000591545 MELTFP08582 738 aa11.53□□□□□ -0.56
SMARCA4-216ENST00000591545 RPS4XP62701 263 aaKnown RBP11.53□□□□□ -0.56
SMARCA4-216ENST00000591545 PGLYRP3Q96LB9 341 aa11.53□□□□□ -0.56
SMARCA4-216ENST00000591545 RALGAPA2Q2PPJ7 1873 aa11.53□□□□□ -0.56
SMARCA4-216ENST00000591545 SYNGR1O43759 233 aa11.53□□□□□ -0.56
SMARCA4-216ENST00000591545 ADAT3Q96EY9 351 aaPredicted RBP11.53□□□□□ -0.56
SMARCA4-216ENST00000591545 FAM90A10PA6NDY2 464 aa11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 FAM90A18PA6NE21 464 aa11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 FAM90A16PA6NEW6 464 aa11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 FAM90A20PA6NIJ5 464 aa11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 FAM90A8PA6NJQ4 464 aa11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 FAM90A7PA6NKC0 464 aa11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 FAM90A22PA8MWA6 464 aa11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 FAM90A12PA8MX19 464 aa11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 FAM90A5PA8MXJ8 464 aa11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 FAM90A23PA8MXZ1 464 aa11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 SNURFLB1AK76 121 aa11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 CYB5R3P00387 301 aaPredicted RBP11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 FAM90A15PP0C7V4 464 aa11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 FAM90A13PP0C7W8 464 aa11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 FAM90A14PP0C7W9 464 aa11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 FAM90A24PP0C7X0 464 aa11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 KIR3DL2P43630 455 aa11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 ZNF788Q6ZQV5 615 aa11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 ZNF552Q9H707 407 aaPredicted RBP11.52□□□□□ -0.56
SMARCA4-216ENST00000591545 HBZP02008 142 aa11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 AREGP15514 252 aa11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 TCL1AP56279 114 aa11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 PSG4Q00888 419 aa11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 KCNMB1Q16558 191 aa11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 FLYWCH2Q96CP2 140 aaKnown RBP11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 IGHV3OR15-7A0A075B7D8 119 aa11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 TRBV23-1A0A0A0MS06 115 aa11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 A1L4Q6 167 aa11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 EFNB2P52799 333 aa11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 IFITM3Q01628 133 aa11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 BPIFA4PQ86YQ2 179 aa11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 OR1K1Q8NGR3 316 aa11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 OR4X1Q8NH49 305 aa11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 GPA33Q99795 319 aa11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 IL19Q9UHD0 177 aa11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 SIP14410 1827 aa11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 CSRP3P50461 194 aa11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 LILRB1Q8NHL6 650 aaPredicted RBP11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 CCL19Q99731 98 aa11.52□□□□□ -0.57
SMARCA4-216ENST00000591545 HSPB1P04792 205 aaKnown RBP11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 FCGR3AP08637 254 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 NMBP08949 121 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 ASAH2BP0C7U1 165 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 LIMS1P48059 325 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 DGAT2L7PQ6IED9 249 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 SSMEM1Q8WWF3 244 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 UFC1Q9Y3C8 167 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 H0Y980 276 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 ACAA1P09110 424 aaPredicted RBP11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 PRDX2P32119 198 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 RIPPLY2Q5TAB7 128 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 CD200R1LQ6Q8B3 271 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 TUBD1Q9UJT1 453 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 CSN3P07498 182 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 VSIG10L2P0DP72 767 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 PIGYQ3MUY2 71 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 SCGB1D4Q6XE38 83 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 NAGKQ9UJ70 344 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 TDRD6O60522 2096 aaKnown RBP11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 CXCL2P19875 107 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 RPL24P83731 157 aaKnown RBP11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 ROM1Q03395 351 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 MRPL54Q6P161 138 aaKnown RBP11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 DYNLRB2Q8TF09 96 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 PRSS27Q9BQR3 290 aa11.51□□□□□ -0.57
SMARCA4-216ENST00000591545 HPRT1P00492 218 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 PSG2P11465 335 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 IER3P46695 156 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 PSMB2P49721 201 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 IGLV3-21P80748 117 aaPredicted RBP11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 HARBI1Q96MB7 349 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 GP6Q9HCN6 339 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 ANK1P16157 1881 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 CENPVL1A0A0U1RR11 272 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 C5orf52A6NGY3 159 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 CDK2AP1O14519 115 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 NANOS3P60323 173 aaKnown RBP11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 SLC35B1P78383 322 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 ZNF880Q6PDB4 577 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 ITLN1Q8WWA0 313 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 TIMP4Q99727 224 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 DSPPQ9NZW4 1301 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 MGST3O14880 152 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 GAMTQ14353 236 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 MMDQ15546 238 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 TUSC1Q2TAM9 212 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 G6PCP35575 357 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 C1orf100Q5SVJ3 147 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 C16orf82Q7Z2V1 217 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 CRIPAKQ8N1N5 446 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms