RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 ATRAIDQ6UW56 229 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 POC1AQ8NBT0 407 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 RSRP1Q9BUV0 290 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 IL36GQ9NZH8 169 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 SSUH2Q9Y2M2 353 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 CELSR3Q9NYQ7 3312 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 A0A1W2PPQ1 181 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 RPL31P62899 125 aaKnown RBP12.39□□□□□ -0.43
RETREG3-208ENST00000589797 USF2Q15853 346 aaPredicted RBP12.39□□□□□ -0.43
RETREG3-208ENST00000589797 PUSL1Q8N0Z8 303 aaKnown RBP12.39□□□□□ -0.43
RETREG3-208ENST00000589797 FAM89BQ8N5H3 189 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 DENND4AQ7Z401 1863 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 SUPT4H1P63272 117 aaKnown RBP12.39□□□□□ -0.43
RETREG3-208ENST00000589797 HFEQ30201 348 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 LRP11Q86VZ4 500 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 CLRN3Q8NCR9 226 aa12.39□□□□□ -0.43
RETREG3-208ENST00000589797 ACTR3CQ9C0K3 210 aaPredicted RBP12.39□□□□□ -0.43
RETREG3-208ENST00000589797 ZNF106Q9H2Y7 1883 aaKnown RBP12.38□□□□□ -0.43
RETREG3-208ENST00000589797 ZNF705GA8MUZ8 300 aaPredicted RBP12.38□□□□□ -0.43
RETREG3-208ENST00000589797 SPINK4O60575 86 aa12.38□□□□□ -0.43
RETREG3-208ENST00000589797 FBP1P09467 338 aa12.38□□□□□ -0.43
RETREG3-208ENST00000589797 KCNJ3P48549 501 aa12.38□□□□□ -0.43
RETREG3-208ENST00000589797 ACSF3Q4G176 576 aaPredicted RBP12.38□□□□□ -0.43
RETREG3-208ENST00000589797 NTNG2Q96CW9 530 aa12.38□□□□□ -0.43
RETREG3-208ENST00000589797 OR6C3Q9NZP0 311 aa12.38□□□□□ -0.43
RETREG3-208ENST00000589797 ONECUT1Q9UBC0 465 aa12.38□□□□□ -0.43
RETREG3-208ENST00000589797 CD8AP01732 235 aa12.38□□□□□ -0.43
RETREG3-208ENST00000589797 RPL19P84098 196 aaKnown RBP12.38□□□□□ -0.43
RETREG3-208ENST00000589797 SELENOHQ8IZQ5 122 aaKnown RBP12.38□□□□□ -0.43
RETREG3-208ENST00000589797 DRAM1Q8N682 238 aa12.38□□□□□ -0.43
RETREG3-208ENST00000589797 PLPPR1Q8TBJ4 325 aa12.38□□□□□ -0.43
RETREG3-208ENST00000589797 LPAR2Q9HBW0 351 aa12.38□□□□□ -0.43
RETREG3-208ENST00000589797 NPTNQ9Y639 398 aa12.38□□□□□ -0.43
RETREG3-208ENST00000589797 RFNGQ9Y644 331 aa12.38□□□□□ -0.43
RETREG3-208ENST00000589797 H7BYZ3 331 aa12.38□□□□□ -0.43
RETREG3-208ENST00000589797 QRFPP83859 136 aa12.38□□□□□ -0.43
RETREG3-208ENST00000589797 AWAT1Q58HT5 328 aa12.38□□□□□ -0.43
RETREG3-208ENST00000589797 C9orf152Q5JTZ5 239 aa12.38□□□□□ -0.43
RETREG3-208ENST00000589797 CIB3Q96Q77 187 aaPredicted RBP12.38□□□□□ -0.43
RETREG3-208ENST00000589797 SLC35B3Q9H1N7 401 aa12.38□□□□□ -0.43
RETREG3-208ENST00000589797 hCG_1809904A0A1W2PP81 198 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 A0A1W2PR64 198 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 A0A1W2PRV1 198 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 ZNF503-AS2A6NEH8 195 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 MDKP21741 143 aaPredicted RBP12.37□□□□□ -0.43
RETREG3-208ENST00000589797 RAB5CP51148 216 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 LINC00205P59089 165 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 NAAAQ02083 359 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 GABRA6Q16445 453 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 LINC01560Q8TB33 94 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 CABLES2Q9BTV7 478 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 SLC35D1Q9NTN3 355 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 KCNMB2Q9Y691 235 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 TLN2Q9Y4G6 2542 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 A0A1W2PPE2 198 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 C12orf77C9JDV5 145 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 OR4A8P0C604 315 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 SELLP14151 372 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 NQO2P16083 231 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 RBFOX3A6NFN3 312 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 COX5BP10606 129 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 NPBWR1P48145 328 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 HMGN3Q15651 99 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 OR10G4Q8NGN3 311 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 OR10G9Q8NGN4 311 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 OR10G7Q8NGN6 311 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 RHOVQ96L33 236 aa12.37□□□□□ -0.43
RETREG3-208ENST00000589797 hADV38S2A0JD32 116 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 PQLC2LA1A4F0 135 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 ODAMA1E959 279 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 RAB19A4D1S5 217 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 DVL1O14640 695 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 S1PR2O95136 353 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 HTD2P86397 168 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 RPRMLQ8N4K4 120 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 SAT2Q96F10 170 aaPredicted RBP12.36□□□□□ -0.43
RETREG3-208ENST00000589797 BSCL2Q96G97 398 aaPredicted RBP12.36□□□□□ -0.43
RETREG3-208ENST00000589797 RARRES2Q99969 163 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 LAMP3Q9UQV4 416 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 ZFYVE26Q68DK2 2539 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 TRAV24A0A0B4J272 114 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 MFSD2BA6NFX1 497 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 CRIM1Q9NZV1 1036 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 KIAA1549LQ6ZVL6 1849 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 A0A1W2PPH5 198 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 C7orf77A4D0Y5 90 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 MT-ND4LP03901 98 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 CD3EP07766 207 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 SONP18583 2426 aaKnown RBP12.36□□□□□ -0.43
RETREG3-208ENST00000589797 SETD2Q9BYW2 2564 aaPredicted RBP12.36□□□□□ -0.43
RETREG3-208ENST00000589797 ALPK3Q96L96 1907 aa12.36□□□□□ -0.43
RETREG3-208ENST00000589797 WIPF3A6NGB9 483 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 SULT1A1P50225 295 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 ERHP84090 104 aaKnown RBP12.35□□□□□ -0.43
RETREG3-208ENST00000589797 IL24Q13007 206 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 RPL39P5Q59GN2 51 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 ACSM6Q6P461 480 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 BTNL8Q6UX41 500 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 TIMD4Q96H15 378 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 PFDN5Q99471 154 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms