RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 GP9P14770 177 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 HIST1H1DP16402 221 aaKnown RBP4.74□□□□□ -1.65
VPS25-204ENST00000589577 PTBP1P26599 531 aaKnown RBP eCLIP4.74□□□□□ -1.65
VPS25-204ENST00000589577 DUSP1P28562 367 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 PRSS3P35030 304 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 DLX6P56179 175 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 AP3S2P59780 193 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 ACTBP60709 375 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 UNC119Q13432 240 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 EDDM3AQ14507 147 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 ZNF273Q14593 569 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 HAGHQ16775 308 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 PNLIPRP3Q17RR3 467 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 C6orf183Q5T699 404 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 ASPHD1Q5U4P2 390 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 PYHIN1Q6K0P9 492 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 LCNL1Q6ZST4 164 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 C16orf82Q7Z2V1 217 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 NR2C2APQ86WQ0 139 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 OR8H2Q8N162 312 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 ZNF565Q8N9K5 539 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 TMEM104Q8NE00 496 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 OR11H6Q8NGC7 330 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 OR8U1Q8NH10 309 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 SDSLQ96GA7 329 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 CMSS1Q9BQ75 279 aaKnown RBP4.74□□□□□ -1.65
VPS25-204ENST00000589577 SLC25A33Q9BSK2 321 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 DPCDQ9BVM2 203 aaPredicted RBP4.74□□□□□ -1.65
VPS25-204ENST00000589577 WDR12Q9GZL7 423 aaKnown RBP4.74□□□□□ -1.65
VPS25-204ENST00000589577 SLIRPQ9GZT3 109 aaKnown RBP4.74□□□□□ -1.65
VPS25-204ENST00000589577 LPAR5Q9H1C0 372 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 IFT22Q9H7X7 185 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 C12orf4Q9NQ89 552 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 PLA2G2EQ9NZK7 142 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 OR6C3Q9NZP0 311 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 ZNF222Q9UK12 451 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 TRAPPC2LQ9UL33 140 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 HSF4Q9ULV5 492 aa4.74□□□□□ -1.65
VPS25-204ENST00000589577 MEIKINA0A087WXM9 373 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 UBE2QL1A1L167 161 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 K7N7A8 449 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 SULT1C2O00338 296 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 CTDSP2O14595 271 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 SPINT2O43291 252 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 OR2F2O95006 317 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 TK1P04183 234 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 RPLP1P05386 114 aaKnown RBP4.73□□□□□ -1.65
VPS25-204ENST00000589577 CSN2P05814 226 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 EIF4EP06730 217 aaKnown RBP4.73□□□□□ -1.65
VPS25-204ENST00000589577 GSTT2BP0CG30 244 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 IGHV1-8P0DP01 117 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 ELK1P19419 428 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 CDK2P24941 298 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 RCVRNP35243 200 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 FAUP35544 74 aaKnown RBP4.73□□□□□ -1.65
VPS25-204ENST00000589577 GLP1RP43220 463 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 INSL3P51460 131 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 TAS2R20P59543 309 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 RPL31P62899 125 aaKnown RBP4.73□□□□□ -1.65
VPS25-204ENST00000589577 ZNF45Q02386 682 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 KIR2DS1Q14954 304 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 ATXN7L3Q14CW9 347 aaPredicted RBP4.73□□□□□ -1.65
VPS25-204ENST00000589577 SRSF7Q16629 238 aaKnown RBP eCLIP4.73□□□□□ -1.65
VPS25-204ENST00000589577 CDNFQ49AH0 187 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 PYDC2Q56P42 97 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 KRBOX4Q5JUW0 171 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 TRIQKQ629K1 86 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 CNIH2Q6PI25 160 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 C6orf201Q7Z4U5 140 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 LYPD6Q86Y78 171 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 SNX29P2Q8IUI4 249 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 LAX1Q8IWV1 398 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 SUMF2Q8NBJ7 301 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 OR5H6Q8NGV6 325 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 SETD6Q8TBK2 473 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 FCAMRQ8WWV6 532 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 ARHGAP5-AS1Q96IT6 56 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 RBM14Q96PK6 669 aaKnown RBP4.73□□□□□ -1.65
VPS25-204ENST00000589577 TSC22D3Q99576 134 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 FAM110AQ9BQ89 295 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 NICN1Q9BSH3 213 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 CHST6Q9GZX3 395 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 GAL3ST2Q9H3Q3 398 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 KCNK15Q9H427 330 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 SCPEP1Q9HB40 452 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 ZNF286AQ9HBT8 521 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 ING3Q9NXR8 418 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 TAS2R8Q9NYW2 309 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 LINC00527Q9UJ94 153 aa4.73□□□□□ -1.65
VPS25-204ENST00000589577 TMEM235A6NFC5 223 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 C17orf98A8MV24 154 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 F8VVB4 439 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 F8VWA3 439 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 RAB27BO00194 218 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 SLC33A1O00400 549 aaPredicted RBP4.72□□□□□ -1.65
VPS25-204ENST00000589577 SOCS1O15524 211 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 HSPA12AO43301 675 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 RBBP9O75884 186 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 RGS11O94810 467 aa4.72□□□□□ -1.65
VPS25-204ENST00000589577 GNB3P16520 340 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms