RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	OR13G1	Q8NGZ3	307 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	MARCH1	Q8TCQ1	289 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	HIST1H2BH	Q93079	126 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	HIST1H2BN	Q99877	126 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	HIST1H2BM	Q99879	126 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	C20orf24	Q9BUV8	137 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	PLK3	Q9H4B4	646 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	POLDIP2	Q9Y2S7	368 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	FAM221A	A4D161	298 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	IL13RA2	Q14627	380 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	USF2	Q15853	346 aa	Predicted RBP	12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	AKR1C8P	Q5T2L2	129 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	TMEM108	Q6UXF1	575 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	LINC00596	Q86U02	117 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	WFDC8	Q8IUA0	241 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	R3HDM4	Q96D70	268 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	GINS3	Q9BRX5	216 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	FBXL17	Q9UF56	701 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	DUSP13	Q9UII6	198 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318		B4DEV8	164 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	FCGR2C	P31995	323 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	ASCL1	P50553	236 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	TAS2R46	P59540	309 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	ADORA2A-AS1	P86434	159 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	JOSD1	Q15040	202 aa	Predicted RBP	12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	CDPF1	Q6NVV7	123 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	VHLL	Q6RSH7	139 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	NUP37	Q8NFH4	326 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	OR5H2	Q8NGV7	314 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	WFIKKN1	Q96NZ8	548 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	ACTR3C	Q9C0K3	210 aa	Predicted RBP	12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	ZNF442	Q9H7R0	627 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	HES4	Q9HCC6	221 aa		12.98	□□□□□ -0.33
DDX39A-209	ENST00000589318	ECI1	P42126	302 aa		12.97	□□□□□ -0.33
DDX39A-209	ENST00000589318	KLF3	P57682	345 aa	Predicted RBP	12.97	□□□□□ -0.33
DDX39A-209	ENST00000589318	ELOB	Q15370	118 aa		12.97	□□□□□ -0.33
DDX39A-209	ENST00000589318	FBXL19-AS1	Q494R0	122 aa		12.97	□□□□□ -0.33
DDX39A-209	ENST00000589318	PRAMEF6	Q5VXH4	476 aa		12.97	□□□□□ -0.33
DDX39A-209	ENST00000589318		Q6P435	159 aa		12.97	□□□□□ -0.33
DDX39A-209	ENST00000589318	ZNF826P	Q6ZT77	177 aa		12.97	□□□□□ -0.33
DDX39A-209	ENST00000589318	SSX8	Q7RTT4	187 aa		12.97	□□□□□ -0.33
DDX39A-209	ENST00000589318	MRPL52	Q86TS9	123 aa	Known RBP	12.97	□□□□□ -0.33
DDX39A-209	ENST00000589318	LHFPL1	Q86WI0	220 aa		12.97	□□□□□ -0.33
DDX39A-209	ENST00000589318		Q8IYB0	196 aa		12.97	□□□□□ -0.33
DDX39A-209	ENST00000589318	HSD17B11	Q8NBQ5	300 aa		12.97	□□□□□ -0.33
DDX39A-209	ENST00000589318	SYT3	Q9BQG1	590 aa		12.97	□□□□□ -0.33
DDX39A-209	ENST00000589318	C5orf66	Q9H5L9	145 aa		12.97	□□□□□ -0.33
DDX39A-209	ENST00000589318	PLA2G2E	Q9NZK7	142 aa		12.97	□□□□□ -0.33
DDX39A-209	ENST00000589318	ICE1	Q9Y2F5	2266 aa		12.97	□□□□□ -0.33
DDX39A-209	ENST00000589318	SMG1	Q96Q15	3661 aa	Known RBP	12.96	□□□□□ -0.33
DDX39A-209	ENST00000589318	ACACB	O00763	2458 aa		12.96	□□□□□ -0.33
DDX39A-209	ENST00000589318	TRAV24	A0A0B4J272	114 aa		12.96	□□□□□ -0.33
DDX39A-209	ENST00000589318	SDCBP	O00560	298 aa	Predicted RBP	12.96	□□□□□ -0.33
DDX39A-209	ENST00000589318	CHRNB4	P30926	498 aa		12.96	□□□□□ -0.33
DDX39A-209	ENST00000589318	S100A10	P60903	97 aa		12.96	□□□□□ -0.33
DDX39A-209	ENST00000589318	BSPH1	Q075Z2	132 aa		12.96	□□□□□ -0.33
DDX39A-209	ENST00000589318	ZNF616	Q08AN1	781 aa		12.96	□□□□□ -0.33
DDX39A-209	ENST00000589318	CDSN	Q15517	529 aa		12.96	□□□□□ -0.33
DDX39A-209	ENST00000589318	WDR82	Q6UXN9	313 aa		12.96	□□□□□ -0.33
DDX39A-209	ENST00000589318	TMEM230	Q96A57	120 aa		12.96	□□□□□ -0.33
DDX39A-209	ENST00000589318	RCC1L	Q96I51	464 aa	Known RBP	12.96	□□□□□ -0.33
DDX39A-209	ENST00000589318	PACRG	Q96M98	296 aa	Predicted RBP	12.96	□□□□□ -0.33
DDX39A-209	ENST00000589318	GPR61	Q9BZJ8	451 aa		12.96	□□□□□ -0.33
DDX39A-209	ENST00000589318	C1orf123	Q9NWV4	160 aa		12.96	□□□□□ -0.33
DDX39A-209	ENST00000589318	ANXA10	Q9UJ72	324 aa		12.96	□□□□□ -0.33
DDX39A-209	ENST00000589318	PITPNC1	Q9UKF7	332 aa		12.96	□□□□□ -0.33
DDX39A-209	ENST00000589318	DEDD	O75618	318 aa		12.96	□□□□□ -0.34
DDX39A-209	ENST00000589318	NAPSA	O96009	420 aa		12.96	□□□□□ -0.34
DDX39A-209	ENST00000589318	SOD3	P08294	240 aa		12.96	□□□□□ -0.34
DDX39A-209	ENST00000589318	CD200	P41217	278 aa		12.96	□□□□□ -0.34
DDX39A-209	ENST00000589318	P2RY1	P47900	373 aa		12.96	□□□□□ -0.34
DDX39A-209	ENST00000589318	TMEM33	P57088	247 aa		12.96	□□□□□ -0.34
DDX39A-209	ENST00000589318	HOXA4	Q00056	320 aa	Predicted RBP	12.96	□□□□□ -0.34
DDX39A-209	ENST00000589318	ZNF146	Q15072	292 aa		12.96	□□□□□ -0.34
DDX39A-209	ENST00000589318	GPR157	Q5UAW9	335 aa		12.96	□□□□□ -0.34
DDX39A-209	ENST00000589318	AADACL3	Q5VUY0	350 aa		12.96	□□□□□ -0.34
DDX39A-209	ENST00000589318	OR2Z1	Q8NG97	314 aa		12.96	□□□□□ -0.34
DDX39A-209	ENST00000589318	OR10C1	Q96KK4	312 aa		12.96	□□□□□ -0.34
DDX39A-209	ENST00000589318	EHF	Q9NZC4	300 aa		12.96	□□□□□ -0.34
DDX39A-209	ENST00000589318	IL2RG	P31785	369 aa		12.95	□□□□□ -0.34
DDX39A-209	ENST00000589318	TNFRSF9	Q07011	255 aa		12.95	□□□□□ -0.34
DDX39A-209	ENST00000589318	CHRFAM7A	Q494W8	412 aa		12.95	□□□□□ -0.34
DDX39A-209	ENST00000589318	SPNS3	Q6ZMD2	512 aa		12.95	□□□□□ -0.34
DDX39A-209	ENST00000589318	DIDO1	Q9BTC0	2240 aa	Known RBP	12.95	□□□□□ -0.34
DDX39A-209	ENST00000589318		E5RGE8	158 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	HSPB6	O14558	160 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	NXPH2	O95156	264 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	GCG	P01275	180 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	MB	P02144	154 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	TAGLN2	P37802	199 aa	Known RBP	12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	RBMX	P38159	391 aa	Known RBP	12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	GAGE1	Q13065	139 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	SLC9A3R2	Q15599	337 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	SPRN	Q5BIV9	151 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	GGNBP1	Q5YKI7	109 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	MRPL24	Q96A35	216 aa	Known RBP	12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	PRO1933	Q9H354	126 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	LIME1	Q9H400	295 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	TMEM242	Q9NWH2	141 aa		12.94	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms