RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 SLC6A7Q99884 636 aa13.81□□□□□ -0.2
SCAMP4-211ENST00000588907 AGMATQ9BSE5 352 aa13.81□□□□□ -0.2
SCAMP4-211ENST00000588907 IFI27L2Q9H2X8 130 aa13.81□□□□□ -0.2
SCAMP4-211ENST00000588907 NUP50Q9UKX7 468 aa13.81□□□□□ -0.2
SCAMP4-211ENST00000588907 GAB2Q9UQC2 676 aa13.81□□□□□ -0.2
SCAMP4-211ENST00000588907 BUB1B-PAK6H3BSN5 160 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 LYRM1O43325 122 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 AVPP01185 164 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 EPHA1P21709 976 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 S100GP29377 79 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 GPR12P47775 334 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 DCTN2Q13561 401 aaKnown RBP13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 SCGB2B2Q4G0G5 96 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 CCDC144NLQ6NUI1 221 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 IDO2Q6ZQW0 420 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 C1orf229Q6ZS94 237 aaPredicted RBP13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 C9orf139Q6ZV77 190 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 LHFPL1Q86WI0 220 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 SLC38A6Q8IZM9 456 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 LYG1Q8N1E2 194 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 ZNF645Q8N7E2 425 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 ZBTB34Q8NCN2 500 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 OR51S1Q8NGJ8 323 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 OR56B4Q8NH76 319 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 SLC25A21Q9BQT8 299 aaPredicted RBP13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 DPM3Q9P2X0 92 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 CDC42EP3Q9UKI2 254 aa13.8□□□□□ -0.2
SCAMP4-211ENST00000588907 ST8SIA5O15466 376 aa13.79□□□□□ -0.2
SCAMP4-211ENST00000588907 OR8U9P0C7N5 309 aa13.79□□□□□ -0.2
SCAMP4-211ENST00000588907 ZNF735P0CB33 412 aa13.79□□□□□ -0.2
SCAMP4-211ENST00000588907 ZNF134P52741 427 aa13.79□□□□□ -0.2
SCAMP4-211ENST00000588907 CMTM1Q8IZ96 169 aa13.79□□□□□ -0.2
SCAMP4-211ENST00000588907 OR8U1Q8NH10 309 aa13.79□□□□□ -0.2
SCAMP4-211ENST00000588907 RPEQ96AT9 228 aa13.79□□□□□ -0.2
SCAMP4-211ENST00000588907 MALSU1Q96EH3 234 aa13.79□□□□□ -0.2
SCAMP4-211ENST00000588907 ZNF486Q96H40 463 aaPredicted RBP13.79□□□□□ -0.2
SCAMP4-211ENST00000588907 AKR1E2Q96JD6 320 aa13.79□□□□□ -0.2
SCAMP4-211ENST00000588907 OR2D2Q9H210 308 aa13.79□□□□□ -0.2
SCAMP4-211ENST00000588907 COPZ2Q9P299 210 aa13.79□□□□□ -0.2
SCAMP4-211ENST00000588907 TLN2Q9Y4G6 2542 aa13.78□□□□□ -0.2
SCAMP4-211ENST00000588907 SLC31A2O15432 143 aa13.78□□□□□ -0.2
SCAMP4-211ENST00000588907 IGHV3-7P01780 117 aa13.78□□□□□ -0.2
SCAMP4-211ENST00000588907 IGHV4-38-2P0DP08 117 aa13.78□□□□□ -0.2
SCAMP4-211ENST00000588907 SAA4P35542 130 aa13.78□□□□□ -0.2
SCAMP4-211ENST00000588907 SRP14P37108 136 aaKnown RBP13.78□□□□□ -0.2
SCAMP4-211ENST00000588907 DLX1P56177 255 aa13.78□□□□□ -0.2
SCAMP4-211ENST00000588907 FXYD4P59646 89 aa13.78□□□□□ -0.2
SCAMP4-211ENST00000588907 RBMS2Q15434 407 aaKnown RBP13.78□□□□□ -0.2
SCAMP4-211ENST00000588907 KLF17Q5JT82 389 aaPredicted RBP13.78□□□□□ -0.2
SCAMP4-211ENST00000588907 AADACL3Q5VUY0 350 aa13.78□□□□□ -0.2
SCAMP4-211ENST00000588907 FAAP20Q6NZ36 180 aa13.78□□□□□ -0.2
SCAMP4-211ENST00000588907 ZFAND1Q8TCF1 268 aa13.78□□□□□ -0.2
SCAMP4-211ENST00000588907 SECTM1Q8WVN6 248 aa13.78□□□□□ -0.2
SCAMP4-211ENST00000588907 SLC5A7Q9GZV3 580 aa13.78□□□□□ -0.2
SCAMP4-211ENST00000588907 MS4A7Q9GZW8 240 aaPredicted RBP13.78□□□□□ -0.2
SCAMP4-211ENST00000588907 SAA2-SAA4A0A096LPE2 208 aa13.77□□□□□ -0.21
SCAMP4-211ENST00000588907 LINC00854A0A1B0GVQ3 168 aa13.77□□□□□ -0.21
SCAMP4-211ENST00000588907 A0A1W2PPE3 182 aa13.77□□□□□ -0.21
SCAMP4-211ENST00000588907 PLA2G10O15496 165 aa13.77□□□□□ -0.21
SCAMP4-211ENST00000588907 GAPDHP04406 335 aaKnown RBP13.77□□□□□ -0.21
SCAMP4-211ENST00000588907 SAA2P0DJI9 122 aaPredicted RBP13.77□□□□□ -0.21
SCAMP4-211ENST00000588907 HIVEP1P15822 2718 aa13.77□□□□□ -0.21
SCAMP4-211ENST00000588907 HIVEP2P31629 2446 aa13.77□□□□□ -0.21
SCAMP4-211ENST00000588907 ZNF816Q0VGE8 651 aaPredicted RBP13.77□□□□□ -0.21
SCAMP4-211ENST00000588907 TPTE2P1Q5T6R2 138 aa13.77□□□□□ -0.21
SCAMP4-211ENST00000588907 ZNF833PQ6ZTB9 187 aa13.77□□□□□ -0.21
SCAMP4-211ENST00000588907 PDZD9Q8IXQ8 264 aa13.77□□□□□ -0.21
SCAMP4-211ENST00000588907 OR8H3Q8N146 312 aa13.77□□□□□ -0.21
SCAMP4-211ENST00000588907 TOMM40LQ969M1 308 aa13.77□□□□□ -0.21
SCAMP4-211ENST00000588907 ADTRPQ96IZ2 230 aa13.77□□□□□ -0.21
SCAMP4-211ENST00000588907 PARP12Q9H0J9 701 aaKnown RBP13.77□□□□□ -0.21
SCAMP4-211ENST00000588907 FXYD6Q9H0Q3 95 aa13.77□□□□□ -0.21
SCAMP4-211ENST00000588907 FAM96BQ9Y3D0 163 aa13.77□□□□□ -0.21
SCAMP4-211ENST00000588907 SVEP1Q4LDE5 3571 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 IGKV1D-13A0A0B4J2D9 117 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 OR5H14A6NHG9 310 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 LY6LH3BQJ8 138 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 HSD17B6O14756 317 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 FBP1P09467 338 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 IGKV1-13P0DP09 117 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 PGAM2P15259 253 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 TAGLNQ01995 201 aaKnown RBP13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 PRB3Q04118 309 aaPredicted RBP13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 UTF1Q5T230 341 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 FAM53AQ6NSI3 398 aaPredicted RBP13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 TGIF2LXQ8IUE1 241 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 ODF3L1Q8IXM7 274 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 PIP4P2Q8N4L2 257 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 ZDHHC22Q8N966 263 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 BVESQ8NE79 360 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 ST6GALNAC6Q969X2 333 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 SMR3AQ99954 134 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 BEX2Q9BXY8 128 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 DPAGT1Q9H3H5 408 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 TBC1D24Q9ULP9 559 aa13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 C14orf166Q9Y224 244 aaKnown RBP13.76□□□□□ -0.21
SCAMP4-211ENST00000588907 MAST4O15021 2626 aa13.75□□□□□ -0.21
SCAMP4-211ENST00000588907 FAM240BA0A1B0GVZ2 78 aa13.75□□□□□ -0.21
SCAMP4-211ENST00000588907 RNF212BA8MTL3 300 aa13.75□□□□□ -0.21
SCAMP4-211ENST00000588907 GPR31O00270 319 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms