RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 SAP30LQ9HAJ7 183 aa7.3□□□□□ -1.24
SMAD4-206ENST00000588860 KCNJ16Q9NPI9 418 aa7.3□□□□□ -1.24
SMAD4-206ENST00000588860 ZC4H2Q9NQZ6 224 aa7.3□□□□□ -1.24
SMAD4-206ENST00000588860 DCAF16Q9NXF7 216 aa7.3□□□□□ -1.24
SMAD4-206ENST00000588860 RNF150Q9ULK6 438 aa7.3□□□□□ -1.24
SMAD4-206ENST00000588860 LRBAP50851 2863 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 A0A1B0GW55 424 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 MSGN1A6NI15 193 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 RNF212BA8MTL3 300 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 F5H0A9 414 aaPredicted RBP7.29□□□□□ -1.24
SMAD4-206ENST00000588860 C15orf65H3BRN8 121 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 K7EPK0 472 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 LGALS8O00214 317 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 ADAM20O43506 726 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 DEDDO75618 318 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 CDS2O95674 445 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 PLAUP00749 431 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 IGLV2-14P01704 120 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 MBPP02686 304 aaPredicted RBP7.29□□□□□ -1.24
SMAD4-206ENST00000588860 SERPINE2P07093 398 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 DUX4L2P0CJ85 424 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 DUX4L3P0CJ86 424 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 DUX4L4P0CJ87 422 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 DUX4L5P0CJ88 424 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 DUX4L6P0CJ89 424 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 DUX4L7P0CJ90 424 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 MUC1P15941 1255 aaPredicted RBP7.29□□□□□ -1.24
SMAD4-206ENST00000588860 S100A1P23297 94 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 APOBEC3AP31941 199 aaPredicted RBP7.29□□□□□ -1.24
SMAD4-206ENST00000588860 EFNB3Q15768 340 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 ESCO2Q56NI9 601 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 FAM209AQ5JX71 171 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 TEX36Q5VZQ5 186 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 THOC7Q6I9Y2 204 aaKnown RBP7.29□□□□□ -1.24
SMAD4-206ENST00000588860 DUX4L9Q6RFH8 374 aaPredicted RBP7.29□□□□□ -1.24
SMAD4-206ENST00000588860 ALKAL2Q6UX46 152 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 FAM71E2Q8N5Q1 922 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 DRAM1Q8N682 238 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 ZNF645Q8N7E2 425 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 FAM216BQ8N7L0 139 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 OR52M1Q8NGK5 317 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 OR4D5Q8NGN0 318 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 RNASE11Q8TAA1 199 aaKnown RBP7.29□□□□□ -1.24
SMAD4-206ENST00000588860 SCARB1Q8WTV0 552 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 RBPMSQ93062 196 aaKnown RBP7.29□□□□□ -1.24
SMAD4-206ENST00000588860 IL22RA2Q969J5 263 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 SDSLQ96GA7 329 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 CCL13Q99616 98 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 OR2D2Q9H210 308 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 ZNF665Q9H7R5 613 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 OR2S2Q9NQN1 319 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 ZFP57Q9NU63 452 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 LIN7CQ9NUP9 197 aaKnown RBP7.29□□□□□ -1.24
SMAD4-206ENST00000588860 DUX4Q9UBX2 424 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 RCL1Q9Y2P8 373 aaKnown RBP7.29□□□□□ -1.24
SMAD4-206ENST00000588860 HIVEP3Q5T1R4 2406 aa7.29□□□□□ -1.24
SMAD4-206ENST00000588860 PIGBOS1A0A0B4J2F0 54 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 RPS10-NUDT3A0A1W2PQS6 291 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 TUBAL3A6NHL2 446 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 DEFB108AA8MXU0 73 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 B9A039 149 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 E5RGE8 158 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 WNT2P09544 360 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 HKR1P10072 659 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 GZMHP20718 246 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 EPHA1P21709 976 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 HTD2P86397 168 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 CLLU1Q5K131 121 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 ZNF788Q6ZQV5 615 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 C1orf87Q8N0U7 546 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 ZBTB34Q8NCN2 500 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 FAM210AQ96ND0 272 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 AQP10Q96PS8 301 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 TOLLIPQ9H0E2 274 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 FAM234AQ9H0X4 552 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 NCOR1P1Q9H4R4 102 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 PLEKHF2Q9H8W4 249 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 CALYQ9NYX4 217 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 CISD1Q9NZ45 108 aaKnown RBP7.28□□□□□ -1.24
SMAD4-206ENST00000588860 OR6C3Q9NZP0 311 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 GNG12Q9UBI6 72 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 PSG11Q9UQ72 335 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 NSG2Q9Y328 171 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 POMT1Q9Y6A1 747 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 NBASA2RRP1 2371 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 FBN3Q75N90 2809 aa7.28□□□□□ -1.24
SMAD4-206ENST00000588860 TRGV10A0A0A0MS01 117 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 TRAV38-1A0A0B4J264 116 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 LINC00862A6NCI5 91 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 TMEM178BH3BS89 294 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 SIGLEC5O15389 551 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 ST8SIA3O43173 380 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 VDAC1P21796 283 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 RPL12P30050 165 aaKnown RBP7.27□□□□□ -1.25
SMAD4-206ENST00000588860 GPR12P47775 334 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 CATR1Q13166 79 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 MSMO1Q15800 293 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 MST1LQ2TV78 715 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 CR1LQ2VPA4 569 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 Q3ZCU0 254 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms