RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 HEPN1Q6WQI6 88 aa16.41■□□□□ 0.22
ATG4D-208ENST00000588667 PIP4P2Q8N4L2 257 aa16.41■□□□□ 0.22
ATG4D-208ENST00000588667 OR13A1Q8NGR1 328 aa16.41■□□□□ 0.22
ATG4D-208ENST00000588667 SESN1Q9Y6P5 492 aa16.41■□□□□ 0.22
ATG4D-208ENST00000588667 NPFFO15130 113 aa16.41■□□□□ 0.22
ATG4D-208ENST00000588667 BET1O15155 118 aa16.41■□□□□ 0.22
ATG4D-208ENST00000588667 CREBL2O60519 120 aaPredicted RBP16.41■□□□□ 0.22
ATG4D-208ENST00000588667 VSIG10L2P0DP72 767 aa16.41■□□□□ 0.22
ATG4D-208ENST00000588667 TAS2R31P59538 309 aa16.41■□□□□ 0.22
ATG4D-208ENST00000588667 HMGN3Q15651 99 aa16.41■□□□□ 0.22
ATG4D-208ENST00000588667 C4orf46Q504U0 113 aa16.41■□□□□ 0.22
ATG4D-208ENST00000588667 RBMS3Q6XE24 437 aaKnown RBP16.41■□□□□ 0.22
ATG4D-208ENST00000588667 OR13D1Q8NGV5 346 aa16.41■□□□□ 0.22
ATG4D-208ENST00000588667 ZNF48Q96MX3 618 aaPredicted RBP16.41■□□□□ 0.22
ATG4D-208ENST00000588667 CABLES2Q9BTV7 478 aa16.41■□□□□ 0.22
ATG4D-208ENST00000588667 MED28Q9H204 178 aa16.41■□□□□ 0.22
ATG4D-208ENST00000588667 GPR132Q9UNW8 380 aa16.41■□□□□ 0.22
ATG4D-208ENST00000588667 SOX21Q9Y651 276 aaPredicted RBP16.41■□□□□ 0.22
ATG4D-208ENST00000588667 KBTBD11-OT1A0A1B0GTJ5 212 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 DIRAS3O95661 229 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 CGB3P0DN86 165 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 CGB7P0DN87 165 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 PGAM2P15259 253 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 COX7A1P24310 79 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 HILS1P60008 231 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 HERV-K104P61576 105 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 HERPUD1Q15011 391 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 C17orf58Q2M2W7 97 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 TRAT1Q6PIZ9 186 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 ZNF554Q86TJ5 538 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 SLC25A42Q86VD7 318 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 SIGLECL1Q8N7X8 197 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 MRGPRDQ8TDS7 321 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 JMJD8Q96S16 334 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 SEC22CQ9BRL7 303 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 TAF9BQ9HBM6 251 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 CALYQ9NYX4 217 aa16.4■□□□□ 0.22
ATG4D-208ENST00000588667 TRAV39A0A0B4J263 110 aa16.39■□□□□ 0.21
ATG4D-208ENST00000588667 SSNA1O43805 119 aa16.39■□□□□ 0.21
ATG4D-208ENST00000588667 OR4E1P0C645 316 aa16.39■□□□□ 0.21
ATG4D-208ENST00000588667 SAA4P35542 130 aa16.39■□□□□ 0.21
ATG4D-208ENST00000588667 DEFB112Q30KQ8 113 aa16.39■□□□□ 0.21
ATG4D-208ENST00000588667 KRTAP21-3Q3LHN1 58 aa16.39■□□□□ 0.21
ATG4D-208ENST00000588667 MIDNQ504T8 468 aa16.39■□□□□ 0.21
ATG4D-208ENST00000588667 PRAMEF5Q5TYX0 476 aa16.39■□□□□ 0.21
ATG4D-208ENST00000588667 ZNF626Q68DY1 528 aa16.39■□□□□ 0.21
ATG4D-208ENST00000588667 PNKDQ8N490 385 aa16.39■□□□□ 0.21
ATG4D-208ENST00000588667 OR10J5Q8NHC4 309 aa16.39■□□□□ 0.21
ATG4D-208ENST00000588667 ZFAND1Q8TCF1 268 aa16.39■□□□□ 0.21
ATG4D-208ENST00000588667 MOB3AQ96BX8 217 aa16.39■□□□□ 0.21
ATG4D-208ENST00000588667 KIRREL1Q96J84 757 aa16.39■□□□□ 0.21
ATG4D-208ENST00000588667 LINC00574Q9H8X3 128 aa16.39■□□□□ 0.21
ATG4D-208ENST00000588667 C14orf166Q9Y224 244 aaKnown RBP16.39■□□□□ 0.21
ATG4D-208ENST00000588667 TRBV6-7A0A0A0MS04 114 aa16.38■□□□□ 0.21
ATG4D-208ENST00000588667 IGKV1-6A0A0C4DH72 117 aa16.38■□□□□ 0.21
ATG4D-208ENST00000588667 A0A0U1RQK1 487 aa16.38■□□□□ 0.21
ATG4D-208ENST00000588667 A0A1W2PRD5 423 aa16.38■□□□□ 0.21
ATG4D-208ENST00000588667 A0A1W2PRF3 423 aa16.38■□□□□ 0.21
ATG4D-208ENST00000588667 A0A1W2PRM7 423 aa16.38■□□□□ 0.21
ATG4D-208ENST00000588667 NPIPB11E5RHQ5 1161 aa16.38■□□□□ 0.21
ATG4D-208ENST00000588667 MMP23AO75900 390 aa16.38■□□□□ 0.21
ATG4D-208ENST00000588667 NFYAP23511 347 aaPredicted RBP16.38■□□□□ 0.21
ATG4D-208ENST00000588667 UBE2MP61081 183 aaKnown RBP16.38■□□□□ 0.21
ATG4D-208ENST00000588667 IL1F10Q8WWZ1 152 aa16.38■□□□□ 0.21
ATG4D-208ENST00000588667 TMEM133Q9H2Q1 129 aa16.38■□□□□ 0.21
ATG4D-208ENST00000588667 PRDM13Q9H4Q3 707 aa16.38■□□□□ 0.21
ATG4D-208ENST00000588667 MDFIC2A0A1B0GVS7 189 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 FAM172BPA6NC97 362 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 CCNKO75909 580 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 PPYP01298 95 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 GZMHP20718 246 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 AADACP22760 399 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 OMGP23515 440 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 UCP3P55916 312 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 PRR18Q8N4B5 295 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 OR11H6Q8NGC7 330 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 CAPSLQ8WWF8 208 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 C5orf66Q9H5L9 145 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 IGHV2-26A0A0B4J1V2 119 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 CTSDP07339 412 aaPredicted RBP16.37■□□□□ 0.21
ATG4D-208ENST00000588667 SSTR5P35346 364 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 FXYD4P59646 89 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 BAMBIQ13145 260 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 TMEM128Q5BJH2 165 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 C5orf24Q7Z6I8 188 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 ZNF431Q8TF32 576 aaPredicted RBP16.37■□□□□ 0.21
ATG4D-208ENST00000588667 TOMM40LQ969M1 308 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 GALMQ96C23 342 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 ZNF221Q9UK13 617 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 FAM96BQ9Y3D0 163 aa16.37■□□□□ 0.21
ATG4D-208ENST00000588667 ODF3BA8MYP8 253 aa16.36■□□□□ 0.21
ATG4D-208ENST00000588667 C12orf77C9JDV5 145 aa16.36■□□□□ 0.21
ATG4D-208ENST00000588667 TUSC2O75896 110 aa16.36■□□□□ 0.21
ATG4D-208ENST00000588667 VENTXO95231 258 aa16.36■□□□□ 0.21
ATG4D-208ENST00000588667 FBP1P09467 338 aa16.36■□□□□ 0.21
ATG4D-208ENST00000588667 AKR1C4P17516 323 aa16.36■□□□□ 0.21
ATG4D-208ENST00000588667 LPCAT3Q6P1A2 487 aa16.36■□□□□ 0.21
ATG4D-208ENST00000588667 SLC38A6Q8IZM9 456 aa16.36■□□□□ 0.21
ATG4D-208ENST00000588667 ADAD2Q8NCV1 583 aaKnown RBP16.36■□□□□ 0.21
ATG4D-208ENST00000588667 OR10A7Q8NGE5 316 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms