RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 TTC32Q5I0X7 151 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 OR10J3Q5JRS4 329 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 SPIN3Q5JUX0 258 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 AVPI1Q5T686 147 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 FAM45BPQ6NSW5 357 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 ZFP1Q6P2D0 407 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 CEMP1Q6PRD7 247 aaPredicted RBP2.02□□□□□ -2.09
VPS4B-203ENST00000588323 FAM131AQ6UXB0 335 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 Q6ZS52 159 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 LGI3Q8N145 548 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 TMEM251Q8N6I4 163 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 OR5AK3PQ8NH89 298 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 OR1S1Q8NH92 325 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 PIGXQ8TBF5 258 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 ACTL9Q8TC94 416 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 RXFP4Q8TDU9 374 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 PPWD1Q96BP3 646 aaKnown RBP2.02□□□□□ -2.09
VPS4B-203ENST00000588323 C12orf43Q96C57 262 aaKnown RBP2.02□□□□□ -2.09
VPS4B-203ENST00000588323 TM4SF18Q96CE8 201 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 FLYWCH2Q96CP2 140 aaKnown RBP2.02□□□□□ -2.09
VPS4B-203ENST00000588323 PPP1R2P1Q96PQ5 205 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 STACQ99469 402 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 C12orf57Q99622 126 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 HSD17B10Q99714 261 aaKnown RBP2.02□□□□□ -2.09
VPS4B-203ENST00000588323 NIPSNAP1Q9BPW8 284 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 ZNF426Q9BUY5 554 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 EMC6Q9BV81 110 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 NUDT9Q9BW91 350 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 PLA2G2FQ9BZM2 168 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 DHX35Q9H5Z1 703 aaKnown RBP2.02□□□□□ -2.09
VPS4B-203ENST00000588323 RHOFQ9HBH0 211 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 HRASLSQ9HDD0 168 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 INIPQ9NRY2 104 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 DDX19AQ9NUU7 478 aaKnown RBP2.02□□□□□ -2.09
VPS4B-203ENST00000588323 PLEKHJ1Q9NW61 149 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 RBFOX1Q9NWB1 397 aaKnown RBP2.02□□□□□ -2.09
VPS4B-203ENST00000588323 BABAM2Q9NXR7 383 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 ANXA10Q9UJ72 324 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 GUCA1BQ9UMX6 200 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 C14orf166Q9Y224 244 aaKnown RBP2.02□□□□□ -2.09
VPS4B-203ENST00000588323 SIGLEC7Q9Y286 467 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 ARL5AQ9Y689 179 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 NAV1Q8NEY1 1877 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 F8P00451 2351 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 ATMQ13315 3056 aa2.02□□□□□ -2.09
VPS4B-203ENST00000588323 TLN1Q9Y490 2541 aaKnown RBP2.01□□□□□ -2.09
VPS4B-203ENST00000588323 KIAA1671Q9BY89 1806 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 SPAG17Q6Q759 2223 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 TRAV19A0A0A6YYK7 116 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 TRAV8-6A0A0B4J262 113 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 IGHV3-66A0A0C4DH42 116 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 PVALEFA0A1B0GWK0 134 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 A6NDX4 124 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 EFCAB9A8MZ26 197 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 DISC1C4P0D8 188 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 INS-IGF2F8WCM5 200 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 MANBAO00462 879 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 BHLHE40O14503 412 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 PFDN6O15212 129 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 ACOX3O15254 700 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 SSNA1O43805 119 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 CA11O75493 328 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 SLC25A14O95258 325 aaPredicted RBP2.01□□□□□ -2.09
VPS4B-203ENST00000588323 CTDNEP1O95476 244 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 IGKV1D-16P01601 117 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 IGLV1-47P01700 117 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 TRBV12-3P01733 135 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 RBP1P09455 135 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 LINC00614P0C842 121 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 HLA-EP13747 358 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 GTF2F2P13984 249 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 CBR1P16152 277 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 PVALBP20472 110 aaPredicted RBP2.01□□□□□ -2.09
VPS4B-203ENST00000588323 MDKP21741 143 aaPredicted RBP2.01□□□□□ -2.09
VPS4B-203ENST00000588323 APLNRP35414 380 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 POLR2IP36954 125 aaKnown RBP2.01□□□□□ -2.09
VPS4B-203ENST00000588323 ACOT2P49753 483 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 AP2S1P53680 142 aaPredicted RBP2.01□□□□□ -2.09
VPS4B-203ENST00000588323 AP1S1P61966 158 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 PSPHP78330 225 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 BTN3A2P78410 334 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 CCL7P80098 99 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 FAM3AP98173 230 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 IFITM3Q01628 133 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 CD164Q04900 197 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 TNFRSF9Q07011 255 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 GTF3C1Q12789 2109 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 SRSF6Q13247 344 aaKnown RBP2.01□□□□□ -2.09
VPS4B-203ENST00000588323 KRR1Q13601 381 aaKnown RBP2.01□□□□□ -2.09
VPS4B-203ENST00000588323 MAPK14Q16539 360 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 ARHGAP11BQ3KRB8 267 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 SLC36A2Q495M3 483 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 CDNFQ49AH0 187 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 TMEM236Q5W0B7 351 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 KDM4DQ6B0I6 523 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 CYB5R2Q6BCY4 276 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 CYHR1Q6ZMK1 362 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 GAPTQ8N292 157 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 SPICQ8N5J4 248 aa2.01□□□□□ -2.09
VPS4B-203ENST00000588323 Q8N9W7 124 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms