RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 NPFFR1Q9GZQ6 430 aa12.54□□□□□ -0.4
NCLN-203ENST00000587740 ABCB10Q9NRK6 738 aa12.54□□□□□ -0.4
NCLN-203ENST00000587740 ZNF230Q9UIE0 474 aaPredicted RBP12.54□□□□□ -0.4
NCLN-203ENST00000587740 SMIM31A0A1B0GVY4 71 aa12.53□□□□□ -0.4
NCLN-203ENST00000587740 HSPA12AO43301 675 aa12.53□□□□□ -0.4
NCLN-203ENST00000587740 HPGDSO60760 199 aa12.53□□□□□ -0.4
NCLN-203ENST00000587740 EIF4EP06730 217 aaKnown RBP12.53□□□□□ -0.4
NCLN-203ENST00000587740 IL3RAP26951 378 aa12.53□□□□□ -0.4
NCLN-203ENST00000587740 MADCAM1Q13477 382 aa12.53□□□□□ -0.4
NCLN-203ENST00000587740 GNMTQ14749 295 aa12.53□□□□□ -0.4
NCLN-203ENST00000587740 SRSF7Q16629 238 aaKnown RBP eCLIP12.53□□□□□ -0.4
NCLN-203ENST00000587740 TPTE2P1Q5T6R2 138 aa12.53□□□□□ -0.4
NCLN-203ENST00000587740 DTX3Q8N9I9 347 aa12.53□□□□□ -0.4
NCLN-203ENST00000587740 OR4F17Q8NGA8 305 aa12.53□□□□□ -0.4
NCLN-203ENST00000587740 OR4A4PQ8NGN8 299 aa12.53□□□□□ -0.4
NCLN-203ENST00000587740 DYNC2LI1Q8TCX1 351 aa12.53□□□□□ -0.4
NCLN-203ENST00000587740 RPEQ96AT9 228 aa12.53□□□□□ -0.4
NCLN-203ENST00000587740 OR4F4Q96R69 305 aa12.53□□□□□ -0.4
NCLN-203ENST00000587740 AUNIPQ9H7T9 357 aa12.53□□□□□ -0.4
NCLN-203ENST00000587740 RAB18Q9NP72 206 aa12.53□□□□□ -0.4
NCLN-203ENST00000587740 CCDC59Q9P031 241 aaKnown RBP12.53□□□□□ -0.4
NCLN-203ENST00000587740 SLC23A1Q9UHI7 598 aa12.53□□□□□ -0.4
NCLN-203ENST00000587740 OOSP1A8MZH6 123 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 FAM25AB3EWG3 89 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 FAM25CB3EWG5 89 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 FAM25GB3EWG6 89 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 LY6LH3BQJ8 138 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 FABP7O15540 132 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 ELK1P19419 428 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 ZBTB25P24278 435 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 CT45A1Q5HYN5 189 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 LY6G6FQ5SQ64 297 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 CCDC144NLQ6NUI1 221 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 Q6ZS49 121 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 SLC25A48Q6ZT89 311 aaKnown RBP12.52□□□□□ -0.41
NCLN-203ENST00000587740 Q8N2B8 174 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 ZNF439Q8NDP4 499 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 CT45A3Q8NHU0 189 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 MAFIPQ8WZ33 124 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 TOMM40LQ969M1 308 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 ABHD14AQ9BUJ0 271 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 ST6GALNAC5Q9BVH7 336 aa12.52□□□□□ -0.41
NCLN-203ENST00000587740 RSL24D1Q9UHA3 163 aaKnown RBP12.52□□□□□ -0.41
NCLN-203ENST00000587740 WI2-2373I1.2A0A1W2PRP0 233 aa12.51□□□□□ -0.41
NCLN-203ENST00000587740 VGLL3A8MV65 326 aa12.51□□□□□ -0.41
NCLN-203ENST00000587740 SLC31A2O15432 143 aa12.51□□□□□ -0.41
NCLN-203ENST00000587740 GSTT2P0CG29 244 aa12.51□□□□□ -0.41
NCLN-203ENST00000587740 GSTT2BP0CG30 244 aa12.51□□□□□ -0.41
NCLN-203ENST00000587740 BRS3P32247 399 aa12.51□□□□□ -0.41
NCLN-203ENST00000587740 CEACAM6P40199 344 aa12.51□□□□□ -0.41
NCLN-203ENST00000587740 RAB7AP51149 207 aa12.51□□□□□ -0.41
NCLN-203ENST00000587740 ZNF134P52741 427 aa12.51□□□□□ -0.41
NCLN-203ENST00000587740 TAS2R20P59543 309 aa12.51□□□□□ -0.41
NCLN-203ENST00000587740 OR2AK2Q8NG84 335 aa12.51□□□□□ -0.41
NCLN-203ENST00000587740 WNT10AQ9GZT5 417 aa12.51□□□□□ -0.41
NCLN-203ENST00000587740 RBM38Q9H0Z9 239 aaKnown RBP12.51□□□□□ -0.41
NCLN-203ENST00000587740 ZNF701M0R085 212 aaPredicted RBP12.5□□□□□ -0.41
NCLN-203ENST00000587740 BET1O15155 118 aa12.5□□□□□ -0.41
NCLN-203ENST00000587740 RGS5O15539 181 aa12.5□□□□□ -0.41
NCLN-203ENST00000587740 SSX5O60225 188 aa12.5□□□□□ -0.41
NCLN-203ENST00000587740 LPLP06858 475 aa12.5□□□□□ -0.41
NCLN-203ENST00000587740 CBX5P45973 191 aa12.5□□□□□ -0.41
NCLN-203ENST00000587740 RAB13P51153 203 aa12.5□□□□□ -0.41
NCLN-203ENST00000587740 DYNLT3P51808 116 aa12.5□□□□□ -0.41
NCLN-203ENST00000587740 KRTAP10-11P60412 298 aa12.5□□□□□ -0.41
NCLN-203ENST00000587740 LIAT1Q6ZQX7 453 aa12.5□□□□□ -0.41
NCLN-203ENST00000587740 Q6ZS46 218 aa12.5□□□□□ -0.41
NCLN-203ENST00000587740 EDARADDQ8WWZ3 215 aa12.5□□□□□ -0.41
NCLN-203ENST00000587740 CABLES2Q9BTV7 478 aa12.5□□□□□ -0.41
NCLN-203ENST00000587740 OR1A1Q9P1Q5 309 aa12.5□□□□□ -0.41
NCLN-203ENST00000587740 ADAM30Q9UKF2 790 aa12.5□□□□□ -0.41
NCLN-203ENST00000587740 MRPS7Q9Y2R9 242 aaKnown RBP12.5□□□□□ -0.41
NCLN-203ENST00000587740 IGKV1-6A0A0C4DH72 117 aa12.49□□□□□ -0.41
NCLN-203ENST00000587740 HSD17B6O14756 317 aa12.49□□□□□ -0.41
NCLN-203ENST00000587740 DIRAS3O95661 229 aa12.49□□□□□ -0.41
NCLN-203ENST00000587740 GAPDHP04406 335 aaKnown RBP12.49□□□□□ -0.41
NCLN-203ENST00000587740 PTHLHP12272 177 aa12.49□□□□□ -0.41
NCLN-203ENST00000587740 CD33P20138 364 aa12.49□□□□□ -0.41
NCLN-203ENST00000587740 ZNF816Q0VGE8 651 aaPredicted RBP12.49□□□□□ -0.41
NCLN-203ENST00000587740 IGSF11Q5DX21 431 aa12.49□□□□□ -0.41
NCLN-203ENST00000587740 DEFB121Q5J5C9 76 aa12.49□□□□□ -0.41
NCLN-203ENST00000587740 OR8H3Q8N146 312 aa12.49□□□□□ -0.41
NCLN-203ENST00000587740 OR10J5Q8NHC4 309 aa12.49□□□□□ -0.41
NCLN-203ENST00000587740 WWC2-AS2Q96NR7 200 aa12.49□□□□□ -0.41
NCLN-203ENST00000587740 GINS4Q9BRT9 223 aa12.49□□□□□ -0.41
NCLN-203ENST00000587740 NDUFA13Q9P0J0 144 aa12.49□□□□□ -0.41
NCLN-203ENST00000587740 EXTL2Q9UBQ6 330 aa12.49□□□□□ -0.41
NCLN-203ENST00000587740 PITPNC1Q9UKF7 332 aa12.49□□□□□ -0.41
NCLN-203ENST00000587740 ITGB1BP1O14713 200 aa12.48□□□□□ -0.41
NCLN-203ENST00000587740 HLA-DQB1P01920 261 aa12.48□□□□□ -0.41
NCLN-203ENST00000587740 CTXN2P0C2S0 81 aa12.48□□□□□ -0.41
NCLN-203ENST00000587740 PRSS3P35030 304 aa12.48□□□□□ -0.41
NCLN-203ENST00000587740 ZNF137PP52743 207 aa12.48□□□□□ -0.41
NCLN-203ENST00000587740 DIAPH2-AS1Q14236 149 aa12.48□□□□□ -0.41
NCLN-203ENST00000587740 ST6GALNAC6Q969X2 333 aa12.48□□□□□ -0.41
NCLN-203ENST00000587740 C6orf62Q9GZU0 229 aaPredicted RBP12.48□□□□□ -0.41
NCLN-203ENST00000587740 IFT46Q9NQC8 304 aa12.48□□□□□ -0.41
NCLN-203ENST00000587740 RDH8Q9NYR8 311 aa12.48□□□□□ -0.41
NCLN-203ENST00000587740 TCF19Q9Y242 345 aa12.48□□□□□ -0.41
NCLN-203ENST00000587740 IGKV1D-8A0A087WSZ0 117 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms