RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 TRAPPC1Q9Y5R8 145 aa13.94□□□□□ -0.18
RANBP3-209ENST00000587411 SPAG17Q6Q759 2223 aa13.93□□□□□ -0.18
RANBP3-209ENST00000587411 ZNF16P17020 682 aaPredicted RBP13.93□□□□□ -0.18
RANBP3-209ENST00000587411 FFAR4Q5NUL3 377 aa13.93□□□□□ -0.18
RANBP3-209ENST00000587411 BTNL3Q6UXE8 466 aa13.93□□□□□ -0.18
RANBP3-209ENST00000587411 TMEM144Q7Z5S9 345 aa13.93□□□□□ -0.18
RANBP3-209ENST00000587411 OR10D3Q8NH80 312 aa13.93□□□□□ -0.18
RANBP3-209ENST00000587411 WDYHV1Q96HA8 205 aa13.93□□□□□ -0.18
RANBP3-209ENST00000587411 HSPB7Q9UBY9 170 aa13.93□□□□□ -0.18
RANBP3-209ENST00000587411 KCNS2Q9ULS6 477 aa13.93□□□□□ -0.18
RANBP3-209ENST00000587411 A0A1W2PQM1 296 aa13.93□□□□□ -0.18
RANBP3-209ENST00000587411 PAGE4O60829 102 aa13.93□□□□□ -0.18
RANBP3-209ENST00000587411 RELQ04864 619 aaPredicted RBP13.93□□□□□ -0.18
RANBP3-209ENST00000587411 FAM78BQ5VT40 261 aa13.93□□□□□ -0.18
RANBP3-209ENST00000587411 ZNF573Q86YE8 665 aa13.93□□□□□ -0.18
RANBP3-209ENST00000587411 FAM58AQ8N1B3 248 aa13.93□□□□□ -0.18
RANBP3-209ENST00000587411 GATAD1Q8WUU5 269 aa13.93□□□□□ -0.18
RANBP3-209ENST00000587411 TMEM45BQ96B21 275 aa13.93□□□□□ -0.18
RANBP3-209ENST00000587411 MS4A10Q96PG2 267 aa13.93□□□□□ -0.18
RANBP3-209ENST00000587411 SPOCK3Q9BQ16 436 aa13.93□□□□□ -0.18
RANBP3-209ENST00000587411 UBE2ZQ9H832 354 aaPredicted RBP13.93□□□□□ -0.18
RANBP3-209ENST00000587411 PXMP4Q9Y6I8 212 aa13.93□□□□□ -0.18
RANBP3-209ENST00000587411 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 TMPRSS2O15393 492 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 PDE6DO43924 150 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 MLF1P58340 268 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 CCL7P80098 99 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 MSMO1Q15800 293 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 GUSBP11Q6P575 273 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 FGFRL1Q8N441 504 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 SGCZQ96LD1 299 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 CEP290O15078 2479 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 C11orf94C9JXX5 98 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 SERPINA7P05543 415 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 CCNOP22674 350 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 CHRNA7P36544 502 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 TLE1Q04724 770 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 FOXL1Q12952 345 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 LINC01551Q86U37 167 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 ZNF709Q8N972 641 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 EML6Q6ZMW3 1958 aa13.92□□□□□ -0.18
RANBP3-209ENST00000587411 MYO9BQ13459 2157 aa13.91□□□□□ -0.18
RANBP3-209ENST00000587411 A0A0U1RQK1 487 aa13.91□□□□□ -0.18
RANBP3-209ENST00000587411 ZNF320A2RRD8 509 aa13.91□□□□□ -0.18
RANBP3-209ENST00000587411 OR5B21A6NL26 309 aa13.91□□□□□ -0.18
RANBP3-209ENST00000587411 SYNGR4O95473 234 aa13.91□□□□□ -0.18
RANBP3-209ENST00000587411 CRYABP02511 175 aaKnown RBP13.91□□□□□ -0.18
RANBP3-209ENST00000587411 UMODP07911 640 aa13.91□□□□□ -0.18
RANBP3-209ENST00000587411 ZNF25P17030 456 aaPredicted RBP13.91□□□□□ -0.18
RANBP3-209ENST00000587411 UBE2NP61088 152 aaKnown RBP13.91□□□□□ -0.18
RANBP3-209ENST00000587411 PRSS8Q16651 343 aa13.91□□□□□ -0.18
RANBP3-209ENST00000587411 OR5P3Q8WZ94 311 aa13.91□□□□□ -0.18
RANBP3-209ENST00000587411 C5orf49A4QMS7 147 aa13.91□□□□□ -0.18
RANBP3-209ENST00000587411 SS18L1O75177 396 aaPredicted RBP13.91□□□□□ -0.18
RANBP3-209ENST00000587411 OR10P1Q8NGE3 313 aa13.91□□□□□ -0.18
RANBP3-209ENST00000587411 ZCCHC14Q8WYQ9 949 aaKnown RBP13.91□□□□□ -0.18
RANBP3-209ENST00000587411 ZNF552Q9H707 407 aaPredicted RBP13.91□□□□□ -0.18
RANBP3-209ENST00000587411 TNRC6BQ9UPQ9 1833 aaKnown RBP13.91□□□□□ -0.18
RANBP3-209ENST00000587411 WDR1O75083 606 aa13.9□□□□□ -0.18
RANBP3-209ENST00000587411 P04436 131 aa13.9□□□□□ -0.18
RANBP3-209ENST00000587411 RPLP1P05386 114 aaKnown RBP13.9□□□□□ -0.18
RANBP3-209ENST00000587411 ZNF488Q96MN9 340 aa13.9□□□□□ -0.18
RANBP3-209ENST00000587411 C17orf112F2Z3M2 114 aa13.9□□□□□ -0.18
RANBP3-209ENST00000587411 LILRA1O75019 489 aa13.9□□□□□ -0.18
RANBP3-209ENST00000587411 SRFP11831 508 aa13.9□□□□□ -0.18
RANBP3-209ENST00000587411 GNG3P63215 75 aa13.9□□□□□ -0.18
RANBP3-209ENST00000587411 ARF1P84077 181 aaKnown RBP13.9□□□□□ -0.18
RANBP3-209ENST00000587411 GAGE1Q13065 139 aa13.9□□□□□ -0.18
RANBP3-209ENST00000587411 DRAM1Q8N682 238 aa13.9□□□□□ -0.18
RANBP3-209ENST00000587411 NPCDR1Q9BY65 106 aa13.9□□□□□ -0.18
RANBP3-209ENST00000587411 LINC00470Q9BZP3 86 aa13.9□□□□□ -0.18
RANBP3-209ENST00000587411 PKIBQ9C010 78 aa13.9□□□□□ -0.18
RANBP3-209ENST00000587411 RYDENQ9NUL5 291 aaKnown RBP13.9□□□□□ -0.18
RANBP3-209ENST00000587411 MPC1Q9Y5U8 109 aa13.9□□□□□ -0.18
RANBP3-209ENST00000587411 SZT2Q5T011 3432 aa13.9□□□□□ -0.18
RANBP3-209ENST00000587411 ABCA7Q8IZY2 2146 aa13.9□□□□□ -0.18
RANBP3-209ENST00000587411 SFTPCP11686 197 aa13.89□□□□□ -0.19
RANBP3-209ENST00000587411 NPPCP23582 126 aa13.89□□□□□ -0.19
RANBP3-209ENST00000587411 VWC2Q2TAL6 325 aa13.89□□□□□ -0.19
RANBP3-209ENST00000587411 TMEM249Q2WGJ8 235 aa13.89□□□□□ -0.19
RANBP3-209ENST00000587411 DUSP23Q9BVJ7 150 aa13.89□□□□□ -0.19
RANBP3-209ENST00000587411 CHD3Q12873 2000 aaKnown RBP13.89□□□□□ -0.19
RANBP3-209ENST00000587411 MARCH11A6NNE9 402 aa13.89□□□□□ -0.19
RANBP3-209ENST00000587411 ANKRD30BLA7E2S9 258 aa13.89□□□□□ -0.19
RANBP3-209ENST00000587411 ZNF705FA8MVS1 300 aaPredicted RBP13.89□□□□□ -0.19
RANBP3-209ENST00000587411 C1QTNF9BB2RNN3 333 aa13.89□□□□□ -0.19
RANBP3-209ENST00000587411 ZNF705DP0CH99 300 aaPredicted RBP13.89□□□□□ -0.19
RANBP3-209ENST00000587411 ZNF705BP0CI00 300 aaPredicted RBP13.89□□□□□ -0.19
RANBP3-209ENST00000587411 SOX8P57073 446 aa13.89□□□□□ -0.19
RANBP3-209ENST00000587411 NUFIP2Q7Z417 695 aaKnown RBP13.89□□□□□ -0.19
RANBP3-209ENST00000587411 TMEM256Q8N2U0 113 aa13.89□□□□□ -0.19
RANBP3-209ENST00000587411 AGBL5Q8NDL9 886 aa13.89□□□□□ -0.19
RANBP3-209ENST00000587411 OR5T1Q8NG75 326 aa13.89□□□□□ -0.19
RANBP3-209ENST00000587411 ABHD3Q8WU67 409 aa13.89□□□□□ -0.19
RANBP3-209ENST00000587411 TBX15Q96SF7 602 aa13.89□□□□□ -0.19
RANBP3-209ENST00000587411 C20orf144Q9BQM9 153 aa13.89□□□□□ -0.19
RANBP3-209ENST00000587411 CHODLQ9H9P2 273 aa13.89□□□□□ -0.19
RANBP3-209ENST00000587411 PRDM6Q9NQX0 595 aa13.89□□□□□ -0.19
RANBP3-209ENST00000587411 PMS2P5A8MQ11 134 aa13.88□□□□□ -0.19
RANBP3-209ENST00000587411 F6UZH7 168 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms