RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 GNG10P50151 68 aa9.49□□□□□ -0.89
CDRT1-207ENST00000583965 MECP2P51608 486 aaKnown RBP9.49□□□□□ -0.89
CDRT1-207ENST00000583965 LGALS4P56470 323 aa9.49□□□□□ -0.89
CDRT1-207ENST00000583965 HLA-DRB5Q30154 266 aa9.49□□□□□ -0.89
CDRT1-207ENST00000583965 CT45A1Q5HYN5 189 aa9.49□□□□□ -0.89
CDRT1-207ENST00000583965 KLF17Q5JT82 389 aaPredicted RBP9.49□□□□□ -0.89
CDRT1-207ENST00000583965 FAM120AOSQ5T036 256 aa9.49□□□□□ -0.89
CDRT1-207ENST00000583965 MINOS1Q5TGZ0 78 aa9.49□□□□□ -0.89
CDRT1-207ENST00000583965 ZNF660Q6AZW8 331 aaPredicted RBP9.49□□□□□ -0.89
CDRT1-207ENST00000583965 CADM3Q8N126 398 aa9.49□□□□□ -0.89
CDRT1-207ENST00000583965 OR10X1Q8NGY0 326 aa9.49□□□□□ -0.89
CDRT1-207ENST00000583965 OR6F1Q8NGZ6 308 aa9.49□□□□□ -0.89
CDRT1-207ENST00000583965 OR56B4Q8NH76 319 aa9.49□□□□□ -0.89
CDRT1-207ENST00000583965 CT45A3Q8NHU0 189 aa9.49□□□□□ -0.89
CDRT1-207ENST00000583965 LEAP2Q969E1 77 aa9.49□□□□□ -0.89
CDRT1-207ENST00000583965 PPP1R14BQ96C90 147 aa9.49□□□□□ -0.89
CDRT1-207ENST00000583965 TINAGL1Q9GZM7 467 aaPredicted RBP9.49□□□□□ -0.89
CDRT1-207ENST00000583965 NUP50Q9UKX7 468 aa9.49□□□□□ -0.89
CDRT1-207ENST00000583965 TBL2Q9Y4P3 447 aaKnown RBP9.49□□□□□ -0.89
CDRT1-207ENST00000583965 MINOS1-NBL1R4GNA1 71 aa9.49□□□□□ -0.89
CDRT1-207ENST00000583965 MTORP42345 2549 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 INMT-MINDY4F8WBC2 141 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 NPFFO15130 113 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 SLC22A5O76082 557 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 PPYP01298 95 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 IGHV3-7P01780 117 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 AMY2AP04746 511 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 TRAPPC2P0DI81 140 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 TRAPPC2BP0DI82 140 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 IGHV4-38-2P0DP08 117 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 IL3RAP26951 378 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 HTR1DP28221 377 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 CEACAM3P40198 252 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 CCR6P51684 374 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 LUMP51884 338 aaPredicted RBP9.48□□□□□ -0.89
CDRT1-207ENST00000583965 ZNF134P52741 427 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 ZNF137PP52743 207 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 HERV-K104P61576 105 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 RBMS2Q15434 407 aaKnown RBP9.48□□□□□ -0.89
CDRT1-207ENST00000583965 UTF1Q5T230 341 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 FAM53AQ6NSI3 398 aaPredicted RBP9.48□□□□□ -0.89
CDRT1-207ENST00000583965 OR4D10Q8NGI6 311 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 OR4P4Q8NGL7 312 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 SLC6A7Q99884 636 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 PRRT1Q99946 306 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 SLC25A21Q9BQT8 299 aaPredicted RBP9.48□□□□□ -0.89
CDRT1-207ENST00000583965 ZNF2Q9BSG1 426 aaPredicted RBP9.48□□□□□ -0.89
CDRT1-207ENST00000583965 PIPOXQ9P0Z9 390 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 SCP2D1Q9UJQ7 156 aa9.48□□□□□ -0.89
CDRT1-207ENST00000583965 RBM7Q9Y580 266 aaKnown RBP9.48□□□□□ -0.89
CDRT1-207ENST00000583965 A0A0B4J293 547 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 C7orf66A4D0T2 115 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 BUB1B-PAK6H3BSN5 160 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 RAB29O14966 203 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 SLC31A2O15432 143 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 DHFRP00374 187 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 H2AFB2P0C5Z0 115 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 AADACP22760 399 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 ECI1P42126 302 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 PRB3Q04118 309 aaPredicted RBP9.47□□□□□ -0.89
CDRT1-207ENST00000583965 SCGB2A2Q13296 93 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 MSMO1Q15800 293 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 FAM71F2Q6NXP2 309 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 LPCAT3Q6P1A2 487 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 C9orf139Q6ZV77 190 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 LHFPL1Q86WI0 220 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 PDZD9Q8IXQ8 264 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.47□□□□□ -0.89
CDRT1-207ENST00000583965 TERB2Q8NHR7 220 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 MOB3AQ96BX8 217 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 AGMATQ9BSE5 352 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 PARP12Q9H0J9 701 aaKnown RBP9.47□□□□□ -0.89
CDRT1-207ENST00000583965 C20orf85Q9H1P6 137 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 IFI27L2Q9H2X8 130 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 NUDT15Q9NV35 164 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 MCUBQ9NWR8 336 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 DPM3Q9P2X0 92 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 ZNF221Q9UK13 617 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 CDC42EP3Q9UKI2 254 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 GAB2Q9UQC2 676 aa9.47□□□□□ -0.89
CDRT1-207ENST00000583965 A0A1W2PPE3 182 aa9.46□□□□□ -0.9
CDRT1-207ENST00000583965 LEUTXA8MZ59 168 aa9.46□□□□□ -0.9
CDRT1-207ENST00000583965 OOSP1A8MZH6 123 aa9.46□□□□□ -0.9
CDRT1-207ENST00000583965 ST8SIA5O15466 376 aa9.46□□□□□ -0.9
CDRT1-207ENST00000583965 TXNL1O43396 289 aa9.46□□□□□ -0.9
CDRT1-207ENST00000583965 PRAF2O60831 178 aa9.46□□□□□ -0.9
CDRT1-207ENST00000583965 PEX14O75381 377 aa9.46□□□□□ -0.9
CDRT1-207ENST00000583965 OR8U9P0C7N5 309 aa9.46□□□□□ -0.9
CDRT1-207ENST00000583965 EPHA1P21709 976 aa9.46□□□□□ -0.9
CDRT1-207ENST00000583965 SAA4P35542 130 aa9.46□□□□□ -0.9
CDRT1-207ENST00000583965 SRP14P37108 136 aaKnown RBP9.46□□□□□ -0.9
CDRT1-207ENST00000583965 UCP3P55916 312 aa9.46□□□□□ -0.9
CDRT1-207ENST00000583965 TATDN3Q17R31 274 aa9.46□□□□□ -0.9
CDRT1-207ENST00000583965 FAAP20Q6NZ36 180 aa9.46□□□□□ -0.9
CDRT1-207ENST00000583965 LYG1Q8N1E2 194 aa9.46□□□□□ -0.9
CDRT1-207ENST00000583965 ZNF645Q8N7E2 425 aa9.46□□□□□ -0.9
CDRT1-207ENST00000583965 OR51S1Q8NGJ8 323 aa9.46□□□□□ -0.9
CDRT1-207ENST00000583965 OR8U1Q8NH10 309 aa9.46□□□□□ -0.9
CDRT1-207ENST00000583965 MALSU1Q96EH3 234 aa9.46□□□□□ -0.9
CDRT1-207ENST00000583965 S1PR3Q99500 378 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms