RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 PCGF1Q9BSM1 259 aa7.56□□□□□ -1.2
CASC3-209ENST00000583902 C5orf66Q9H5L9 145 aa7.56□□□□□ -1.2
CASC3-209ENST00000583902 SLC2A9Q9NRM0 540 aa7.56□□□□□ -1.2
CASC3-209ENST00000583902 CACFD1Q9UGQ2 172 aa7.56□□□□□ -1.2
CASC3-209ENST00000583902 INSIG2Q9Y5U4 225 aa7.56□□□□□ -1.2
CASC3-209ENST00000583902 MED13LQ71F56 2210 aa7.56□□□□□ -1.2
CASC3-209ENST00000583902 A0A096LNT2 108 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 DUXBA0A1W2PPF3 345 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 J3QR06 171 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 MPPED1O15442 326 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 PHF1O43189 567 aaPredicted RBP7.55□□□□□ -1.2
CASC3-209ENST00000583902 RBFOX2O43251 390 aaKnown RBP eCLIP7.55□□□□□ -1.2
CASC3-209ENST00000583902 DUS4LO95620 317 aaKnown RBP7.55□□□□□ -1.2
CASC3-209ENST00000583902 OR4E1P0C645 316 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 RRASP10301 218 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 EPHA1P21709 976 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 PPP1CCP36873 323 aaKnown RBP7.55□□□□□ -1.2
CASC3-209ENST00000583902 GPR12P47775 334 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 ARHGDIBP52566 201 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 DVL1P1P54792 670 aaPredicted RBP7.55□□□□□ -1.2
CASC3-209ENST00000583902 PIGPP57054 158 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 FXYD4P59646 89 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 TATDN3Q17R31 274 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 C4orf46Q504U0 113 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 MINOS1Q5TGZ0 78 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 DHRS7BQ6IAN0 325 aaPredicted RBP7.55□□□□□ -1.2
CASC3-209ENST00000583902 GLCCI1Q86VQ1 547 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 CADM3Q8N126 398 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 ABHD12Q8N2K0 398 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 ZNF439Q8NDP4 499 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 OR52L2PQ8NGH6 319 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 COQ8AQ8NI60 647 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 SECTM1Q8WVN6 248 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 IL22RA2Q969J5 263 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 TOMM40LQ969M1 308 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 PHB2Q99623 299 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 RTBDNQ9BSG5 229 aaPredicted RBP7.55□□□□□ -1.2
CASC3-209ENST00000583902 FXYD6Q9H0Q3 95 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 MMP28Q9H239 520 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 NARFLQ9H6Q4 476 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 LIN7CQ9NUP9 197 aaKnown RBP7.55□□□□□ -1.2
CASC3-209ENST00000583902 OR1A1Q9P1Q5 309 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 ONECUT1Q9UBC0 465 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 VSIG4Q9Y279 399 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 TBL2Q9Y4P3 447 aaKnown RBP7.55□□□□□ -1.2
CASC3-209ENST00000583902 MINOS1-NBL1R4GNA1 71 aa7.55□□□□□ -1.2
CASC3-209ENST00000583902 TRAV6A0A075B6T7 132 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 IGHV2-26A0A0B4J1V2 119 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 TRAV39A0A0B4J263 110 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 TEX13DA0A0J9YY54 714 aaPredicted RBP7.54□□□□□ -1.2
CASC3-209ENST00000583902 CRYM-AS1A6NIL9 109 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 LEUTXA8MZ59 168 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 SFT2D2O95562 160 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 OR8U9P0C7N5 309 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 CCL3L1P16619 93 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 NFYBP25208 207 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 ZFP36P26651 326 aaKnown RBP7.54□□□□□ -1.2
CASC3-209ENST00000583902 MC5RP33032 325 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 RBMXP38159 391 aaKnown RBP7.54□□□□□ -1.2
CASC3-209ENST00000583902 UBE2E1P51965 193 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 CBX3Q13185 183 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 DHRS2Q13268 280 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 MIDNQ504T8 468 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 PRAMEF5Q5TYX0 476 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 DCAF12L2Q5VW00 463 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 ZNF626Q68DY1 528 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 CYB5R2Q6BCY4 276 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 CCDC144NLQ6NUI1 221 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 ZNF818PQ6ZRF7 136 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 TMED4Q7Z7H5 227 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 LYG2Q86SG7 212 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 LRTM2Q8N967 370 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 OR10X1Q8NGY0 326 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 OR8U1Q8NH10 309 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 ZNF431Q8TF32 576 aaPredicted RBP7.54□□□□□ -1.2
CASC3-209ENST00000583902 CHAC2Q8WUX2 184 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 MITD1Q8WV92 249 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 MRGPRFQ96AM1 343 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 SIRPDQ9H106 197 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 IFI27L2Q9H2X8 130 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 NAA60Q9H7X0 242 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 PSG11Q9UQ72 335 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 PRELID3BQ9Y3B1 194 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 POLQO75417 2590 aa7.54□□□□□ -1.2
CASC3-209ENST00000583902 APCP25054 2843 aa7.53□□□□□ -1.2
CASC3-209ENST00000583902 CCDC168Q8NDH2 2452 aa7.53□□□□□ -1.2
CASC3-209ENST00000583902 IGKV1D-13A0A0B4J2D9 117 aa7.53□□□□□ -1.2
CASC3-209ENST00000583902 C3orf85A0A1B0GTC6 90 aa7.53□□□□□ -1.2
CASC3-209ENST00000583902 FAM157AC9JC47 383 aa7.53□□□□□ -1.2
CASC3-209ENST00000583902 H0Y980 276 aa7.53□□□□□ -1.2
CASC3-209ENST00000583902 PGLYRP1O75594 196 aaPredicted RBP7.53□□□□□ -1.2
CASC3-209ENST00000583902 SNAPC5O75971 98 aa7.53□□□□□ -1.2
CASC3-209ENST00000583902 TOX4O94842 621 aa7.53□□□□□ -1.2
CASC3-209ENST00000583902 IFNA2P01563 188 aa7.53□□□□□ -1.2
CASC3-209ENST00000583902 IGLV1-47P01700 117 aa7.53□□□□□ -1.2
CASC3-209ENST00000583902 HLA-AP01891 365 aaKnown RBP7.53□□□□□ -1.2
CASC3-209ENST00000583902 IGKV1-13P0DP09 117 aa7.53□□□□□ -1.2
CASC3-209ENST00000583902 AKR1C4P17516 323 aa7.53□□□□□ -1.2
CASC3-209ENST00000583902 HLA-GP17693 338 aa7.53□□□□□ -1.2
CASC3-209ENST00000583902 OMGP23515 440 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms