RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 PRRX1P54821 245 aa13.32□□□□□ -0.28
CDK5RAP3-228ENST00000583363 FXYD4P59646 89 aa13.32□□□□□ -0.28
CDK5RAP3-228ENST00000583363 KRTAP1-1Q07627 177 aa13.32□□□□□ -0.28
CDK5RAP3-228ENST00000583363 NCR3LG1Q68D85 454 aa13.32□□□□□ -0.28
CDK5RAP3-228ENST00000583363 SLC25A48Q6ZT89 311 aaKnown RBP13.32□□□□□ -0.28
CDK5RAP3-228ENST00000583363 NRARPQ7Z6K4 114 aa13.32□□□□□ -0.28
CDK5RAP3-228ENST00000583363 PNKDQ8N490 385 aa13.32□□□□□ -0.28
CDK5RAP3-228ENST00000583363 OR11H6Q8NGC7 330 aa13.32□□□□□ -0.28
CDK5RAP3-228ENST00000583363 OR8U1Q8NH10 309 aa13.32□□□□□ -0.28
CDK5RAP3-228ENST00000583363 SLC25A21Q9BQT8 299 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP3-228ENST00000583363 CLEC7AQ9BXN2 247 aa13.32□□□□□ -0.28
CDK5RAP3-228ENST00000583363 FXYD6Q9H0Q3 95 aa13.32□□□□□ -0.28
CDK5RAP3-228ENST00000583363 OCEL1Q9H607 264 aa13.32□□□□□ -0.28
CDK5RAP3-228ENST00000583363 RNF150Q9ULK6 438 aa13.32□□□□□ -0.28
CDK5RAP3-228ENST00000583363 GPR132Q9UNW8 380 aa13.32□□□□□ -0.28
CDK5RAP3-228ENST00000583363 GAB2Q9UQC2 676 aa13.32□□□□□ -0.28
CDK5RAP3-228ENST00000583363 RNASEK-C17orf49H0YIS7 233 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 TOR1AO14656 332 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 ST8SIA5O15466 376 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 CRLF1O75462 422 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 NDUFB6O95139 128 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 AVPP01185 164 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 IGLV1-47P01700 117 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 TCRBP04435 133 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 COX7A1P24310 79 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 ECI1P42126 302 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 GNG10P50151 68 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 RAB7AP51149 207 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 RGS21Q2M5E4 152 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 LPCAT3Q6P1A2 487 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 BEND2Q8NDZ0 799 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 MARCH1Q8TCQ1 289 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 UPRTQ96BW1 309 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 SCGB3A2Q96PL1 93 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 ABHD14AQ9BUJ0 271 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 SLC5A7Q9GZV3 580 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 RBM7Q9Y580 266 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 MXRA5Q9NR99 2828 aa13.31□□□□□ -0.28
CDK5RAP3-228ENST00000583363 PTTG1O95997 202 aa13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 IGLV2-14P01704 120 aa13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 ZNF16P17020 682 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 GNRHRP30968 328 aa13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 UBE2E1P51965 193 aa13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 KLRD1Q13241 179 aa13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 RBMS2Q15434 407 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 SURF2Q15527 256 aaPredicted RBP13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 ZDHHC22Q8N966 263 aa13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 ENKURQ8TC29 256 aa13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 SECTM1Q8WVN6 248 aa13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 LHX4Q969G2 390 aa13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 TOMM40LQ969M1 308 aa13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 ABHD14BQ96IU4 210 aa13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 RSRP1Q9BUV0 290 aa13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 IFI27L2Q9H2X8 130 aa13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 GHITMQ9H3K2 345 aa13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 CCL28Q9NRJ3 127 aa13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 ZNRD1Q9P1U0 126 aa13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 COPZ2Q9P299 210 aa13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 VSIG4Q9Y279 399 aa13.3□□□□□ -0.28
CDK5RAP3-228ENST00000583363 CENPVL3A0A0U1RRI6 287 aa13.29□□□□□ -0.28
CDK5RAP3-228ENST00000583363 ODF3BA8MYP8 253 aa13.29□□□□□ -0.28
CDK5RAP3-228ENST00000583363 CD5LO43866 347 aa13.29□□□□□ -0.28
CDK5RAP3-228ENST00000583363 SLC22A5O76082 557 aa13.29□□□□□ -0.28
CDK5RAP3-228ENST00000583363 PGAM2P15259 253 aa13.29□□□□□ -0.28
CDK5RAP3-228ENST00000583363 SPNP16150 400 aa13.29□□□□□ -0.28
CDK5RAP3-228ENST00000583363 ZNF626Q68DY1 528 aa13.29□□□□□ -0.28
CDK5RAP3-228ENST00000583363 C1orf229Q6ZS94 237 aaPredicted RBP13.29□□□□□ -0.28
CDK5RAP3-228ENST00000583363 ODF3L1Q8IXM7 274 aa13.29□□□□□ -0.28
CDK5RAP3-228ENST00000583363 SLC38A6Q8IZM9 456 aa13.29□□□□□ -0.28
CDK5RAP3-228ENST00000583363 ZFAND1Q8TCF1 268 aa13.29□□□□□ -0.28
CDK5RAP3-228ENST00000583363 RTBDNQ9BSG5 229 aaPredicted RBP13.29□□□□□ -0.28
CDK5RAP3-228ENST00000583363 MMP28Q9H239 520 aa13.29□□□□□ -0.28
CDK5RAP3-228ENST00000583363 NUBP2Q9Y5Y2 271 aa13.29□□□□□ -0.28
CDK5RAP3-228ENST00000583363 CUBNO60494 3623 aa13.29□□□□□ -0.28
CDK5RAP3-228ENST00000583363 HSD17B6O14756 317 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 RAB29O14966 203 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 PROP1O75360 226 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 ARG1P05089 322 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 CTSDP07339 412 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 GPR12P47775 334 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 BAMBIQ13145 260 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 OXA1LQ15070 435 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 MSMO1Q15800 293 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 HLA-DRB5Q30154 266 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 PDZD9Q8IXQ8 264 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 LYG1Q8N1E2 194 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 ZNF645Q8N7E2 425 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 ZBTB34Q8NCN2 500 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 OR4P4Q8NGL7 312 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 OR10X1Q8NGY0 326 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 AKR1E2Q96JD6 320 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 OR2D2Q9H210 308 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 C5orf66Q9H5L9 145 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 SDHAF2Q9NX18 166 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 PIPOXQ9P0Z9 390 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 ZNF221Q9UK13 617 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 FLVCR2Q9UPI3 526 aa13.28□□□□□ -0.28
CDK5RAP3-228ENST00000583363 LY6LH3BQJ8 138 aa13.27□□□□□ -0.29
CDK5RAP3-228ENST00000583363 BUB1B-PAK6H3BSN5 160 aa13.27□□□□□ -0.29
CDK5RAP3-228ENST00000583363 GPR31O00270 319 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms