RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 SELENOHQ8IZQ5 122 aaKnown RBP7.74□□□□□ -1.17
SS18-220ENST00000582092 KCNRGQ8N5I3 272 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 ZNF645Q8N7E2 425 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 SLC35G3Q8N808 338 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 ZNF680Q8NEM1 530 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 OR1S1Q8NH92 325 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 FAM216AQ8WUB2 273 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 H1FXQ92522 213 aaKnown RBP7.74□□□□□ -1.17
SS18-220ENST00000582092 NEUROG1Q92886 237 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 MSI2Q96DH6 328 aaKnown RBP7.74□□□□□ -1.17
SS18-220ENST00000582092 SDSLQ96GA7 329 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 TMEM56Q96MV1 263 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 TP53RKQ96S44 253 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 FOXC2Q99958 501 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 ZNF471Q9BX82 626 aaPredicted RBP7.74□□□□□ -1.17
SS18-220ENST00000582092 SHARPINQ9H0F6 387 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 OR2D2Q9H210 308 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 PLEKHA2Q9HB19 425 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 LPAR3Q9UBY5 353 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 TNFSF18Q9UNG2 199 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 PSG11Q9UQ72 335 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 TMEM56-RWDD3S4R434 201 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 ARID1AO14497 2285 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 PRR14LQ5THK1 2151 aa7.74□□□□□ -1.17
SS18-220ENST00000582092 IGHV3-43A0A0B4J1X8 118 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 ZNF729A6NN14 1252 aaPredicted RBP7.73□□□□□ -1.17
SS18-220ENST00000582092 DEFB108AA8MXU0 73 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 E5RGE8 158 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 G3V3Q6 166 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.73□□□□□ -1.17
SS18-220ENST00000582092 K7EPK0 472 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 SIGLEC5O15389 551 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 ST8SIA3O43173 380 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 ADAM20O43506 726 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 BCL2L11O43521 198 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 CDS2O95674 445 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 PLAUP00749 431 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 IGHV3-43DP0DP04 118 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 VDAC1P21796 283 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 S100A1P23297 94 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 UCP1P25874 307 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 SSTR5P35346 364 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 PPP1CCP36873 323 aaKnown RBP7.73□□□□□ -1.17
SS18-220ENST00000582092 NKX2-1P43699 371 aaPredicted RBP7.73□□□□□ -1.17
SS18-220ENST00000582092 MSMO1Q15800 293 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 TMEM30BQ3MIR4 351 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 LDLRAD3Q86YD5 345 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 ZCCHC24Q8N2G6 241 aaKnown RBP7.73□□□□□ -1.17
SS18-220ENST00000582092 FAM71E2Q8N5Q1 922 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 DRAM1Q8N682 238 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 TCTEX1D1Q8N7M0 179 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 TCTEX1D2Q8WW35 142 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 MBD6Q96DN6 1003 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 TIMD4Q96H15 378 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 GAFA1Q96PS6 74 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 GAL3ST2Q9H3Q3 398 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 BEX4Q9NWD9 120 aaPredicted RBP7.73□□□□□ -1.17
SS18-220ENST00000582092 CALYQ9NYX4 217 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 SLC25A10Q9UBX3 287 aaPredicted RBP7.73□□□□□ -1.17
SS18-220ENST00000582092 JPT1Q9UK76 154 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 NSG2Q9Y328 171 aa7.73□□□□□ -1.17
SS18-220ENST00000582092 POLQO75417 2590 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 KBTBD11-OT1A0A1B0GTJ5 212 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 A0A1W2PPH5 198 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 MPTX1A8MV57 137 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 TAAR5O14804 337 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 YPEL1O60688 119 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 SPDEFO95238 335 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 TPT1P13693 172 aaKnown RBP7.72□□□□□ -1.17
SS18-220ENST00000582092 EPHA1P21709 976 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 NFYBP25208 207 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 RPL12P30050 165 aaKnown RBP7.72□□□□□ -1.17
SS18-220ENST00000582092 LPAR6P43657 344 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 HOXA4Q00056 320 aaPredicted RBP7.72□□□□□ -1.17
SS18-220ENST00000582092 MEF2CQ06413 473 aaPredicted RBP7.72□□□□□ -1.17
SS18-220ENST00000582092 EXOSC2Q13868 293 aaKnown RBP7.72□□□□□ -1.17
SS18-220ENST00000582092 EIF5AL1Q6IS14 154 aaKnown RBP7.72□□□□□ -1.17
SS18-220ENST00000582092 ZNF66Q6ZN08 573 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 ZNF788Q6ZQV5 615 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 SLC7A5P1Q8MH63 180 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 CD300LFQ8TDQ1 290 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 NRGNQ92686 78 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 YPEL2Q96QA6 119 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 HSD17B10Q99714 261 aaKnown RBP7.72□□□□□ -1.17
SS18-220ENST00000582092 DCTN5Q9BTE1 182 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 SLC25A31Q9H0C2 315 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 CBLN4Q9NTU7 201 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 IDI2-AS1Q9NZ38 188 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 CLN8Q9UBY8 286 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 LAMP3Q9UQV4 416 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 PRELID3BQ9Y3B1 194 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 DCHS2Q6V1P9 2916 aa7.72□□□□□ -1.17
SS18-220ENST00000582092 CHD3Q12873 2000 aaKnown RBP7.72□□□□□ -1.17
SS18-220ENST00000582092 PRRC2AP48634 2157 aaKnown RBP7.71□□□□□ -1.17
SS18-220ENST00000582092 DYSFO75923 2080 aa7.71□□□□□ -1.17
SS18-220ENST00000582092 ROS1P08922 2347 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 BORCS7-ASMTA0A0B4J1R7 106 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 A0A1B0GU03 582 aa7.71□□□□□ -1.18
SS18-220ENST00000582092 MEX3AA1L020 520 aaKnown RBP7.71□□□□□ -1.18
SS18-220ENST00000582092 RBMXL2O75526 392 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms