RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 CCSO14618 274 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 DVL1O14640 695 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 FSTL3O95633 263 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 C1QBP02746 253 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 GIPP09681 153 aaPredicted RBP10.37□□□□□ -0.75
SRSF1-204ENST00000581979 OR8U9P0C7N5 309 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 IGHV4-31P0DP07 118 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 PPP1CCP36873 323 aaKnown RBP10.37□□□□□ -0.75
SRSF1-204ENST00000581979 NKX2-5P52952 324 aaPredicted RBP10.37□□□□□ -0.75
SRSF1-204ENST00000581979 RND3P61587 244 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 CYB5R2Q6BCY4 276 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 TBC1D26Q86UD7 250 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 NOXA1Q86UR1 476 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 LDLRAD3Q86YD5 345 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 OR5M8Q8NGP6 311 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 OR8U1Q8NH10 309 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 RAB1CQ92928 201 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 PIMREGQ9BSJ6 248 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 TOLLIPQ9H0E2 274 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 PARP12Q9H0J9 701 aaKnown RBP10.37□□□□□ -0.75
SRSF1-204ENST00000581979 GNG12Q9UBI6 72 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 JPT1Q9UK76 154 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 DSCAML1Q8TD84 2053 aa10.37□□□□□ -0.75
SRSF1-204ENST00000581979 ZNF729A6NN14 1252 aaPredicted RBP10.36□□□□□ -0.75
SRSF1-204ENST00000581979 FAM25EA8MYX2 175 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 MPPED1O15442 326 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 PHF1O43189 567 aaPredicted RBP10.36□□□□□ -0.75
SRSF1-204ENST00000581979 PPIHO43447 177 aaKnown RBP10.36□□□□□ -0.75
SRSF1-204ENST00000581979 OR5AC1P0C628 307 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 H2BFSP57053 126 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 MEF2CQ06413 473 aaPredicted RBP10.36□□□□□ -0.75
SRSF1-204ENST00000581979 C17orf58Q2M2W7 97 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 DCAF12L2Q5VW00 463 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 FAM53AQ6NSI3 398 aaPredicted RBP10.36□□□□□ -0.75
SRSF1-204ENST00000581979 CORO2AQ92828 525 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 GALNT14Q96FL9 552 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 AKR1E2Q96JD6 320 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 PDCD10Q9BUL8 212 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 SUCNR1Q9BXA5 334 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 CHODLQ9H9P2 273 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 C19orf12Q9NSK7 152 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 CDC42EP3Q9UKI2 254 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 UBE2J1Q9Y385 318 aaPredicted RBP10.36□□□□□ -0.75
SRSF1-204ENST00000581979 C3orf85A0A1B0GTC6 90 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 KBTBD11-OT1A0A1B0GTJ5 212 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 DBX1A6NMT0 343 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 F2RL2O00254 374 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 TNFSF12O43508 249 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 CGB3P0DN86 165 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 CGB7P0DN87 165 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 OMGP23515 440 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 GZMKP49863 264 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 RAP2BP61225 183 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 RPL31P62899 125 aaKnown RBP10.36□□□□□ -0.75
SRSF1-204ENST00000581979 SP6Q3SY56 376 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 TCF23Q7RTU1 214 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 BVESQ8NE79 360 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 OR2T35Q8NGX2 323 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 RANBP3Q9H6Z4 567 aaPredicted RBP10.36□□□□□ -0.75
SRSF1-204ENST00000581979 METTL8Q9H825 291 aaKnown RBP10.36□□□□□ -0.75
SRSF1-204ENST00000581979 PIPOXQ9P0Z9 390 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 LPAR3Q9UBY5 353 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 CLN8Q9UBY8 286 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 LINC00312Q9Y6C7 94 aa10.36□□□□□ -0.75
SRSF1-204ENST00000581979 MXRA5Q9NR99 2828 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 MALRD1Q5VYJ5 2156 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 C13orf42A0A1B0GVH6 325 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 C5orf51A6NDU8 294 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 PGLYRP1O75594 196 aaPredicted RBP10.35□□□□□ -0.75
SRSF1-204ENST00000581979 FCN3O75636 299 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 RGS11O94810 467 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 OR2A4O95047 310 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 HLA-GP17693 338 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 TMEM187Q14656 261 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 LY6G6FQ5SQ64 297 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 GSG1LQ6UXU4 331 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 EDARADDQ8WWZ3 215 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 ASB13Q8WXK3 278 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 OR2A7Q96R45 310 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 OR2D2Q9H210 308 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 GAL3ST2Q9H3Q3 398 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 RAB18Q9NP72 206 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 TAS2R3Q9NYW6 316 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 IDI2-AS1Q9NZ38 188 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 RNF150Q9ULK6 438 aa10.35□□□□□ -0.75
SRSF1-204ENST00000581979 IGHV4-61A0A0C4DH41 118 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 YPEL1O60688 119 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 ADAP1O75689 374 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 HOXB5P09067 269 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 FAM157CP0CG43 387 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 ZNF273Q14593 569 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 TMEM155Q4W5P6 130 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 MORN2Q502X0 79 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 LIAT1Q6ZQX7 453 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 LGI3Q8N145 548 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 ZNF645Q8N7E2 425 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 OR8B3Q8NGG8 313 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 SPATA3Q8NHX4 192 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 WDR89Q96FK6 387 aaPredicted RBP10.34□□□□□ -0.75
SRSF1-204ENST00000581979 YPEL2Q96QA6 119 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms