RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 A0A0A6YYH2 397 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 A6NJ64 397 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 TRPC5OSA6NMA1 111 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 FTCDNL1E5RQL4 147 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 F5H5K5 113 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 GPR171O14626 319 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 TOX3O15405 576 aaPredicted RBP0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 DENRO43583 198 aaKnown RBP0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 CALUO43852 315 aaPredicted RBP0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 STX10O60499 249 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 TNFAIP8O95379 198 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 ASS1P00966 412 aaKnown RBP0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 APOEP02649 317 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 TPM3P06753 285 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 FBP1P09467 338 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 LIMS3P0CW19 117 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 LIMS4P0CW20 117 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 PET100P0DJ07 73 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 HIST1H1CP16403 213 aaKnown RBP0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 CD36P16671 472 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 CFL1P23528 166 aaKnown RBP0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 F8A1P23610 371 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 RCVRNP35243 200 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 PPP1CCP36873 323 aaKnown RBP0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 ACTR1BP42025 376 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 STC1P52823 247 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 AKR1C2P52895 323 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 RAB8AP61006 207 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 TPM4P67936 248 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 FAM3AP98173 230 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 GTF2BQ00403 316 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 PRB3Q04118 309 aaPredicted RBP0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 RAB31Q13636 194 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 ZBTB6Q15916 424 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 SDHAF4Q5VUM1 108 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 TTC33Q6PID6 262 aaPredicted RBP0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 MTERF4Q7Z6M4 381 aaKnown RBP0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 NATD1Q8N6N6 113 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 TMEM75Q8N9X5 138 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 OR51H1Q8NH63 302 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 OR5K1Q8NHB7 308 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 DYNC2LI1Q8TCX1 351 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 TMBIM1Q969X1 311 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 MRAP2Q96G30 205 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 FAM210AQ96ND0 272 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 NAA38Q9BRA0 125 aaKnown RBP0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 DCUN1D5Q9BTE7 237 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 SPZ1Q9BXG8 430 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 C1QTNF6Q9BXI9 259 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 WDR54Q9H977 334 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 NOSIPQ9Y314 301 aaKnown RBP0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 PTPRBP23467 1997 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 MYH11P35749 1972 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 UBR2Q8IWV8 1755 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 RIMS2Q9UQ26 1411 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 HEATR5AQ86XA9 2040 aa0.62□□□□□ -2.31
SMCHD1-206ENST00000581631 DOCK5Q9H7D0 1870 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 DSCAMO60469 2012 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 GOLGA6L10A6NI86 522 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 SMIM23A6NLE4 172 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 EFCAB9A8MZ26 197 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 B4DEV8 164 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 H3BSA7 217 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 GOLGA8RI6L899 631 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 CCRL2O00421 344 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 COPEO14579 308 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 ITGB1BP1O14713 200 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 ZW10O43264 779 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 ADAP1O75689 374 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 LY6HO94772 140 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 AHSA1O95433 338 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 ORM1P02763 201 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 KRT7P08729 469 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 OR4A8P0C604 315 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 OCM2P0CE71 109 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 CTSEP14091 401 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 ORM2P19652 201 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 ALOX5APP20292 161 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 PVALBP20472 110 aaPredicted RBP0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 SYT1P21579 422 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 GADD45AP24522 165 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 PSMA1P25786 263 aaKnown RBP0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 ATP6V0CP27449 155 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 PEBP1P30086 187 aaKnown RBP0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 CD79BP40259 229 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 DLX6P56179 175 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 LINC00313P59037 77 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 GABARAPL2P60520 117 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 ACTBP60709 375 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 ACTG1P63261 375 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 MGAT3Q09327 533 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 PMS2P3Q13401 168 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 COTL1Q14019 142 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 EBPQ15125 230 aaKnown RBP0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 SLC36A2Q495M3 483 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 MRPL51Q4U2R6 128 aaKnown RBP0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 CENPWQ5EE01 88 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 OGFRL1Q5TC84 451 aaPredicted RBP0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 SCGB1D4Q6XE38 83 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 CCDC121Q6ZUS5 278 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms