RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 MSMO1Q15800 293 aa12.63□□□□□ -0.39
SS18-216ENST00000580751 IGSF11Q5DX21 431 aa12.63□□□□□ -0.39
SS18-216ENST00000580751 ZNF626Q68DY1 528 aa12.63□□□□□ -0.39
SS18-216ENST00000580751 FAAP20Q6NZ36 180 aa12.63□□□□□ -0.39
SS18-216ENST00000580751 Q6ZNX1 250 aa12.63□□□□□ -0.39
SS18-216ENST00000580751 H1FOOQ8IZA3 346 aaPredicted RBP12.63□□□□□ -0.39
SS18-216ENST00000580751 ABHD12Q8N2K0 398 aa12.63□□□□□ -0.39
SS18-216ENST00000580751 PRR18Q8N4B5 295 aa12.63□□□□□ -0.39
SS18-216ENST00000580751 PIP4P2Q8N4L2 257 aa12.63□□□□□ -0.39
SS18-216ENST00000580751 C22orf15Q8WYQ4 148 aa12.63□□□□□ -0.39
SS18-216ENST00000580751 MOB3AQ96BX8 217 aa12.63□□□□□ -0.39
SS18-216ENST00000580751 ALX4Q9H161 411 aaPredicted RBP12.63□□□□□ -0.39
SS18-216ENST00000580751 A0A1W2PRD5 423 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 A0A1W2PRF3 423 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 A0A1W2PRM7 423 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 ODF3BA8MYP8 253 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 SDCBPO00560 298 aaPredicted RBP12.62□□□□□ -0.39
SS18-216ENST00000580751 HSPA12AO43301 675 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 PRAF2O60831 178 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 ARG1P05089 322 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 FCGR2CP31995 323 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 SAA4P35542 130 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 CCR6P51684 374 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 LGALS4P56470 323 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 UBE2MP61081 183 aaKnown RBP12.62□□□□□ -0.39
SS18-216ENST00000580751 LTC4SQ16873 150 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 SCGB2B2Q4G0G5 96 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 RBMS3Q6XE24 437 aaKnown RBP12.62□□□□□ -0.39
SS18-216ENST00000580751 OR13C8Q8NGS7 320 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 ZNF596Q8TC21 504 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 ZFAND1Q8TCF1 268 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 ZNF418Q8TF45 676 aaPredicted RBP12.62□□□□□ -0.39
SS18-216ENST00000580751 ZNF486Q96H40 463 aaPredicted RBP12.62□□□□□ -0.39
SS18-216ENST00000580751 ZNF2Q9BSG1 426 aaPredicted RBP12.62□□□□□ -0.39
SS18-216ENST00000580751 GHITMQ9H3K2 345 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 FAM96BQ9Y3D0 163 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 OR2W1Q9Y3N9 320 aa12.62□□□□□ -0.39
SS18-216ENST00000580751 TBL2Q9Y4P3 447 aaKnown RBP12.62□□□□□ -0.39
SS18-216ENST00000580751 INMT-MINDY4F8WBC2 141 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 TOR1AO14656 332 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 BET1O15155 118 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 YPEL1O60688 119 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 PEX14O75381 377 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 SLC22A5O76082 557 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 DHFRP00374 187 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 PPYP01298 95 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 H2AFB2P0C5Z0 115 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 PRRX1P54821 245 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 HERV-K104P61576 105 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 AADACL3Q5VUY0 350 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 SLC38A6Q8IZM9 456 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 BCL6BQ8N143 479 aaPredicted RBP12.61□□□□□ -0.39
SS18-216ENST00000580751 BEND2Q8NDZ0 799 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 OR9G1Q8NH87 305 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 OR1L1Q8NH94 360 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 UBALD1Q8TB05 177 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 IL1F10Q8WWZ1 152 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 EDARADDQ8WWZ3 215 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 YPEL2Q96QA6 119 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 C20orf85Q9H1P6 137 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 NUDT15Q9NV35 164 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 GFOD1Q9NXC2 390 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 GNG12Q9UBI6 72 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 ATRQ13535 2644 aa12.61□□□□□ -0.39
SS18-216ENST00000580751 A0A0U1RQK1 487 aa12.6□□□□□ -0.39
SS18-216ENST00000580751 FAM172BPA6NC97 362 aa12.6□□□□□ -0.39
SS18-216ENST00000580751 FBP1P09467 338 aa12.6□□□□□ -0.39
SS18-216ENST00000580751 LOXL3P58215 753 aa12.6□□□□□ -0.39
SS18-216ENST00000580751 TAS2R31P59538 309 aa12.6□□□□□ -0.39
SS18-216ENST00000580751 TUSC1Q2TAM9 212 aa12.6□□□□□ -0.39
SS18-216ENST00000580751 MINOS1Q5TGZ0 78 aa12.6□□□□□ -0.39
SS18-216ENST00000580751 C11orf88Q6PI97 169 aa12.6□□□□□ -0.39
SS18-216ENST00000580751 C8orf31Q8N9H6 132 aa12.6□□□□□ -0.39
SS18-216ENST00000580751 OR2S2Q9NQN1 319 aa12.6□□□□□ -0.39
SS18-216ENST00000580751 GPR132Q9UNW8 380 aa12.6□□□□□ -0.39
SS18-216ENST00000580751 MINOS1-NBL1R4GNA1 71 aa12.6□□□□□ -0.39
SS18-216ENST00000580751 A0A0A6YYJ9 748 aa12.59□□□□□ -0.39
SS18-216ENST00000580751 IGLV1-47P01700 117 aa12.59□□□□□ -0.39
SS18-216ENST00000580751 IL5P05113 134 aa12.59□□□□□ -0.39
SS18-216ENST00000580751 CTSDP07339 412 aaPredicted RBP12.59□□□□□ -0.39
SS18-216ENST00000580751 HTR1DP28221 377 aa12.59□□□□□ -0.39
SS18-216ENST00000580751 CEACAM6P40199 344 aa12.59□□□□□ -0.39
SS18-216ENST00000580751 DEFB112Q30KQ8 113 aa12.59□□□□□ -0.39
SS18-216ENST00000580751 ZBTB34Q8NCN2 500 aa12.59□□□□□ -0.39
SS18-216ENST00000580751 OR4P4Q8NGL7 312 aa12.59□□□□□ -0.39
SS18-216ENST00000580751 ZDHHC16Q969W1 377 aa12.59□□□□□ -0.39
SS18-216ENST00000580751 MRGPRFQ96AM1 343 aa12.59□□□□□ -0.39
SS18-216ENST00000580751 AKR1E2Q96JD6 320 aa12.59□□□□□ -0.39
SS18-216ENST00000580751 JMJD8Q96S16 334 aa12.59□□□□□ -0.39
SS18-216ENST00000580751 MMP28Q9H239 520 aa12.59□□□□□ -0.39
SS18-216ENST00000580751 PRDM13Q9H4Q3 707 aa12.59□□□□□ -0.39
SS18-216ENST00000580751 RDH8Q9NYR8 311 aa12.59□□□□□ -0.39
SS18-216ENST00000580751 PSG11Q9UQ72 335 aa12.59□□□□□ -0.39
SS18-216ENST00000580751 AMMECR1Q9Y4X0 333 aaPredicted RBP12.59□□□□□ -0.39
SS18-216ENST00000580751 IGHV3-43A0A0B4J1X8 118 aa12.58□□□□□ -0.4
SS18-216ENST00000580751 OR5H14A6NHG9 310 aa12.58□□□□□ -0.4
SS18-216ENST00000580751 J3QR06 171 aa12.58□□□□□ -0.4
SS18-216ENST00000580751 TCF21O43680 179 aa12.58□□□□□ -0.4
SS18-216ENST00000580751 IGHV3-43DP0DP04 118 aa12.58□□□□□ -0.4
SS18-216ENST00000580751 SPNP16150 400 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms