RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 HSPB9Q9BQS6 159 aa11.68□□□□□ -0.54
TRAPPC8-207ENST00000580104 CACNA1GO43497 2377 aa11.68□□□□□ -0.54
TRAPPC8-207ENST00000580104 MNX1P50219 401 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC8-207ENST00000580104 PAX5Q02548 391 aa11.68□□□□□ -0.54
TRAPPC8-207ENST00000580104 HES1Q14469 280 aa11.68□□□□□ -0.54
TRAPPC8-207ENST00000580104 RCC1LQ96I51 464 aaKnown RBP11.68□□□□□ -0.54
TRAPPC8-207ENST00000580104 TM2D1Q9BX74 207 aa11.68□□□□□ -0.54
TRAPPC8-207ENST00000580104 PARLQ9H300 379 aa11.68□□□□□ -0.54
TRAPPC8-207ENST00000580104 OOEPA6NGQ2 149 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 SCGB2A1O75556 95 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 HOXA5P20719 270 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 OPRK1P41145 380 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 DHRS13Q6UX07 377 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 SPNS3Q6ZMD2 512 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 STARD4Q96DR4 205 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 MARS2Q96GW9 593 aaKnown RBP11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 DLL3Q9NYJ7 618 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 GRIFINA4D1Z8 144 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 PDE6DO43924 150 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 BPIFB3P59826 476 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 ZNF826PQ6ZT77 177 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 VOPP1Q96AW1 172 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 MRPL13Q9BYD1 178 aaKnown RBP11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 HIF1ANQ9NWT6 349 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 IL36RNQ9UBH0 155 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 POLEQ07864 2286 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 LOC102723971A0A1B0GUV8 181 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 DBX1A6NMT0 343 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 LDLRAD4O15165 306 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 GDF9O60383 454 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 CA11O75493 328 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 CD1BP29016 333 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 CD81P60033 236 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 KIAA2026Q5HYC2 2103 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 ZNF506Q5JVG8 444 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 TRAT1Q6PIZ9 186 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 SARAFQ96BY9 339 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 SRSF10O75494 262 aaKnown RBP11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 OR2H2O95918 312 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 CD5P06127 495 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 ZNF766Q5HY98 468 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 LYZL4Q96KX0 146 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 DDA1Q9BW61 102 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 CISD1Q9NZ45 108 aaKnown RBP11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 HS3ST3B1Q9Y662 390 aa11.67□□□□□ -0.54
TRAPPC8-207ENST00000580104 CYC1P08574 325 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 TRA2AQ13595 282 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 TCTEX1D1Q8N7M0 179 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 OR1L1Q8NH94 360 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 FANCMQ8IYD8 2048 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 A0A1W2PQM1 296 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 ZG16O60844 167 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 UBE2L3P68036 154 aaKnown RBP11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 ZNF600Q6ZNG1 722 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 TGIF2LXQ8IUE1 241 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 ATG101Q9BSB4 218 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 COA4Q9NYJ1 87 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 C5orf63A6NC05 138 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 C5orf52A6NGY3 159 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 PROB1E7EW31 1015 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 ZIC3O60481 467 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 UCP3P55916 312 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 HES4Q9HCC6 221 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 ZNF355PQ9NSJ1 428 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 NAGKQ9UJ70 344 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 IGHV1-45A0A0A0MS14 117 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 ZNF729A6NN14 1252 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 SLC31A2O15432 143 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 DNPH1O43598 174 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 RPLP1P05386 114 aaKnown RBP11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 GFI1BQ5VTD9 330 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 ETFRF1Q6IPR1 90 aa11.66□□□□□ -0.54
TRAPPC8-207ENST00000580104 PMS2P1A4D2B8 440 aa11.65□□□□□ -0.54
TRAPPC8-207ENST00000580104 UBE2CO00762 179 aa11.65□□□□□ -0.54
TRAPPC8-207ENST00000580104 SLC25A5P05141 298 aaKnown RBP11.65□□□□□ -0.54
TRAPPC8-207ENST00000580104 ZNF596Q8TC21 504 aa11.65□□□□□ -0.54
TRAPPC8-207ENST00000580104 DIDO1Q9BTC0 2240 aaKnown RBP11.65□□□□□ -0.54
TRAPPC8-207ENST00000580104 A0A1W2PR77 199 aa11.65□□□□□ -0.54
TRAPPC8-207ENST00000580104 HELTA6NFD8 242 aa11.65□□□□□ -0.54
TRAPPC8-207ENST00000580104 ZNF891A8MT65 544 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC8-207ENST00000580104 WFDC8Q8IUA0 241 aa11.65□□□□□ -0.54
TRAPPC8-207ENST00000580104 WDR61Q9GZS3 305 aaKnown RBP11.65□□□□□ -0.54
TRAPPC8-207ENST00000580104 ZNF552Q9H707 407 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC8-207ENST00000580104 WDR54Q9H977 334 aa11.65□□□□□ -0.54
TRAPPC8-207ENST00000580104 CSN3P07498 182 aa11.65□□□□□ -0.54
TRAPPC8-207ENST00000580104 USF1P22415 310 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC8-207ENST00000580104 C10orf128Q5T292 105 aa11.65□□□□□ -0.54
TRAPPC8-207ENST00000580104 REC114Q7Z4M0 266 aa11.65□□□□□ -0.54
TRAPPC8-207ENST00000580104 HBZP02008 142 aa11.65□□□□□ -0.55
TRAPPC8-207ENST00000580104 CT45A10P0DMU9 189 aa11.65□□□□□ -0.55
TRAPPC8-207ENST00000580104 ORM2P19652 201 aa11.65□□□□□ -0.55
TRAPPC8-207ENST00000580104 AKAP6Q13023 2319 aa11.65□□□□□ -0.55
TRAPPC8-207ENST00000580104 CPEB3Q8NE35 698 aaKnown RBP11.65□□□□□ -0.55
TRAPPC8-207ENST00000580104 OR2M7Q8NG81 312 aa11.65□□□□□ -0.55
TRAPPC8-207ENST00000580104 K7EQM0 130 aa11.64□□□□□ -0.55
TRAPPC8-207ENST00000580104 DOCK7Q96N67 2140 aa11.64□□□□□ -0.55
TRAPPC8-207ENST00000580104 IGHV3OR15-7A0A075B7D8 119 aa11.64□□□□□ -0.55
TRAPPC8-207ENST00000580104 M0R2Z0 102 aa11.64□□□□□ -0.55
TRAPPC8-207ENST00000580104 AGAP20933 346 aa11.64□□□□□ -0.55
TRAPPC8-207ENST00000580104 MRPS11P82912 194 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms