RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 CT45A5P0DMU8 189 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 CT45A7P0DMV0 189 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 EGR2P11161 476 aaPredicted RBP6.91□□□□□ -1.3
GGA3-207ENST00000578896 SPNP16150 400 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 WNT4P56705 351 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 TAS2R43P59537 309 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 RPS27AP62979 156 aaKnown RBP6.91□□□□□ -1.3
GGA3-207ENST00000578896 CX3CL1P78423 397 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 HTD2P86397 168 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 GABPB1Q06547 395 aaPredicted RBP6.91□□□□□ -1.3
GGA3-207ENST00000578896 UNC119Q13432 240 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 P2RY14Q15391 338 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 TMEM30BQ3MIR4 351 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 RBM48Q5RL73 367 aaKnown RBP6.91□□□□□ -1.3
GGA3-207ENST00000578896 CDH26Q8IXH8 852 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 NANOGP1Q8N7R0 232 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 DRAXINQ8NBI3 349 aaPredicted RBP6.91□□□□□ -1.3
GGA3-207ENST00000578896 MINDY2Q8NBR6 621 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 NPBQ8NG41 125 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 OR2AK2Q8NG84 335 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 ARPC1AQ92747 370 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 GALMQ96C23 342 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 UQCC2Q9BRT2 126 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 OR1A1Q9P1Q5 309 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 KIAA1456Q9P272 454 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 EPPK1P58107 5090 aaKnown RBP6.91□□□□□ -1.3
GGA3-207ENST00000578896 PLECQ15149 4684 aaKnown RBP6.91□□□□□ -1.3
GGA3-207ENST00000578896 DNAH1Q9P2D7 4330 aa6.91□□□□□ -1.3
GGA3-207ENST00000578896 TRIM64CA6NLI5 447 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 PTGES3LE9PB15 166 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 H7C2Y5 167 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 EBAG9O00559 213 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 RRHO14718 337 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 SOCS1O15524 211 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 RGS11O94810 467 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 NDUFA3O95167 84 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 GSTP1P09211 210 aaKnown RBP6.9□□□□□ -1.3
GGA3-207ENST00000578896 RUNX1Q01196 453 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 PLGLAQ15195 96 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 RCN1Q15293 331 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 C19orf54Q5BKX5 351 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 CEACAM19Q7Z692 300 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 C8orf59Q8N0T1 100 aaPredicted RBP6.9□□□□□ -1.3
GGA3-207ENST00000578896 SVOPQ8N4V2 548 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 NKAIN3Q8N8D7 197 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 TMEM203Q969S6 136 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 TMEM59Q9BXS4 323 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 TOLLIPQ9H0E2 274 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 CST11Q9H112 138 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 TPSG1Q9NRR2 321 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 CNOT2Q9NZN8 540 aaKnown RBP6.9□□□□□ -1.3
GGA3-207ENST00000578896 SLC23A1Q9UHI7 598 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 ZNF580Q9UK33 172 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 SMAD5-AS1Q9Y6J3 95 aa6.9□□□□□ -1.3
GGA3-207ENST00000578896 CSMD3Q7Z407 3707 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 LINC01619G3V211 115 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 H0YJW9 148 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 PROP1O75360 226 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 NAPSAO96009 420 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 CD1AP06126 327 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 SCTP09683 121 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 CEACAM6P40199 344 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 QRFPP83859 136 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 DEFA5Q01523 94 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 SRSF7Q16629 238 aaKnown RBP eCLIP6.89□□□□□ -1.31
GGA3-207ENST00000578896 C1orf100Q5SVJ3 147 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 GLT8D1Q68CQ7 371 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 ZNF660Q6AZW8 331 aaPredicted RBP6.89□□□□□ -1.31
GGA3-207ENST00000578896 ZNF880Q6PDB4 577 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 UNQ5815/PRO19632Q6UWF5 114 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 PPP1R27Q86WC6 154 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 PACRGLQ8N7B6 248 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 LFNGQ8NES3 379 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 FBLIM1Q8WUP2 373 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 RCHY1Q96PM5 261 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 GFI1Q99684 422 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 CHCHD6Q9BRQ6 235 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 C11orf54Q9H0W9 315 aaPredicted RBP6.89□□□□□ -1.31
GGA3-207ENST00000578896 PLCXD1Q9NUJ7 323 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 PLEKHJ1Q9NW61 149 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 FKBP14Q9NWM8 211 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 ABRACLQ9P1F3 81 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 METTL1Q9UBP6 276 aaKnown RBP6.89□□□□□ -1.31
GGA3-207ENST00000578896 GHRLQ9UBU3 117 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 STEAP1Q9UHE8 339 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 AK3Q9UIJ7 227 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 FOXA2Q9Y261 457 aaPredicted RBP6.89□□□□□ -1.31
GGA3-207ENST00000578896 ERGIC3Q9Y282 383 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 NUBP2Q9Y5Y2 271 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 HYDINQ4G0P3 5121 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 LYSTQ99698 3801 aa6.89□□□□□ -1.31
GGA3-207ENST00000578896 TMEM14DPA8MWL7 114 aa6.88□□□□□ -1.31
GGA3-207ENST00000578896 ANKRD65E5RJM6 399 aa6.88□□□□□ -1.31
GGA3-207ENST00000578896 RAB29O14966 203 aa6.88□□□□□ -1.31
GGA3-207ENST00000578896 CA2P00918 260 aa6.88□□□□□ -1.31
GGA3-207ENST00000578896 CDK1P06493 297 aa6.88□□□□□ -1.31
GGA3-207ENST00000578896 LGALS1P09382 135 aaKnown RBP6.88□□□□□ -1.31
GGA3-207ENST00000578896 CD3GP09693 182 aa6.88□□□□□ -1.31
GGA3-207ENST00000578896 FRMD6-AS1P0C7T7 363 aa6.88□□□□□ -1.31
GGA3-207ENST00000578896 UBBP0CG47 229 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms