RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 LY6EQ16553 131 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 WHAMMP3Q1A5X7 153 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 SPRNQ5BIV9 151 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 MINOS1Q5TGZ0 78 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 CGB2Q6NT52 195 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 C1orf94Q6P1W5 598 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 RNASEKQ6P5S7 137 aaKnown RBP3.97□□□□□ -1.77
PTPRM-208ENST00000578600 OR13F1Q8NGS4 319 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 OR10Z1Q8NGY1 313 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 AGR3Q8TD06 166 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 LZICQ8WZA0 190 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 H1FXQ92522 213 aaKnown RBP3.97□□□□□ -1.77
PTPRM-208ENST00000578600 UFD1Q92890 307 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 TNFRSF14Q92956 283 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 SLC25A38Q96DW6 304 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 TEX37Q96LM6 180 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 ADAT1Q9BUB4 502 aaKnown RBP3.97□□□□□ -1.77
PTPRM-208ENST00000578600 ZNF426Q9BUY5 554 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 ZNF702PQ9H963 129 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 USE1Q9NZ43 259 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 PTTG3PQ9NZH4 202 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 PEX16Q9Y5Y5 336 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 MINOS1-NBL1R4GNA1 71 aa3.97□□□□□ -1.77
PTPRM-208ENST00000578600 RBMY1BA6NDE4 496 aaKnown RBP3.96□□□□□ -1.78
PTPRM-208ENST00000578600 RBMY1EA6NEQ0 496 aaKnown RBP3.96□□□□□ -1.78
PTPRM-208ENST00000578600 TMEM210A6NLX4 147 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 CD300LBA8K4G0 201 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 OR7A10O76100 309 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 OR5F1O95221 314 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 RBMY1DP0C7P1 496 aaKnown RBP3.96□□□□□ -1.78
PTPRM-208ENST00000578600 RBMY1CP0DJD4 496 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 PGA5P0DJD9 388 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 ZP3P21754 424 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 PMELP40967 661 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 OR3A4PP47883 348 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 TAS2R41P59536 307 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 PRR4Q16378 134 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 CCDC121Q6ZUS5 278 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 LYG1Q8N1E2 194 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 OSR2Q8N2R0 312 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 OR1L6Q8NGR2 347 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 OR8U1Q8NH10 309 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 TYMSOSQ8TAI1 123 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 TMEM239Q8WW34 195 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 STMN2Q93045 179 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 MYDGFQ969H8 173 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 DUS3LQ96G46 650 aaKnown RBP3.96□□□□□ -1.78
PTPRM-208ENST00000578600 PGLYRP4Q96LB8 373 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 MICU1Q9BPX6 476 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 PAXXQ9BUH6 204 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 Q9H3A6 140 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 ANKRD19PQ9H560 264 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 AIG1Q9NVV5 245 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 RASL12Q9NYN1 266 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 ZNF256Q9Y2P7 627 aaPredicted RBP3.96□□□□□ -1.78
PTPRM-208ENST00000578600 N6AMT1Q9Y5N5 214 aa3.96□□□□□ -1.78
PTPRM-208ENST00000578600 A0A075B6Q4 140 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 IGHV7-81A0A0B4J1V7 117 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 PRSS37A4D1T9 235 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 A6NDX4 124 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 HDAC3O15379 428 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 XRCC2O43543 280 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 CHST1O43916 411 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 HLA-DPB1P04440 258 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 BPGMP07738 259 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 TSPAN19P0C672 248 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 GPX2P18283 190 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 CEACAM3P40198 252 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 AQP2P41181 271 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 POLR2JP52435 117 aaKnown RBP3.95□□□□□ -1.78
PTPRM-208ENST00000578600 PRRX1P54821 245 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 ENDOGQ14249 297 aaKnown RBP3.95□□□□□ -1.78
PTPRM-208ENST00000578600 GK3PQ14409 553 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 MPPED2Q15777 294 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 TMEM255AQ5JRV8 349 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 FAM201AQ5SY85 155 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 DRAM2Q6UX65 266 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 OAFQ86UD1 273 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 ZNF429Q86V71 674 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 VSIG2Q96IQ7 327 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 CNN2Q99439 309 aaKnown RBP3.95□□□□□ -1.78
PTPRM-208ENST00000578600 CCL13Q99616 98 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 PITX2Q99697 317 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 SH3GL1Q99961 368 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 ZNF649Q9BS31 505 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 RNF126Q9BV68 326 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 RGCCQ9H4X1 137 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 NMNAT1Q9HAN9 279 aaPredicted RBP3.95□□□□□ -1.78
PTPRM-208ENST00000578600 VNN3Q9NY84 501 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 ZNF391Q9UJN7 358 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 KCNIP3Q9Y2W7 256 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 MPC1Q9Y5U8 109 aa3.95□□□□□ -1.78
PTPRM-208ENST00000578600 COL7A1Q02388 2944 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 TENM2Q9NT68 2774 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 IGHV1OR15-1A0A075B7D0 117 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 IGLV1-36A0A0B4J1U3 117 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 A0A1W2PRD5 423 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 A0A1W2PRF3 423 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 A0A1W2PRM7 423 aa3.94□□□□□ -1.78
PTPRM-208ENST00000578600 PSMB11A5LHX3 300 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms