RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 DPPA3Q6W0C5 159 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 C16orf82Q7Z2V1 217 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 SGMS2Q8NHU3 365 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 PCGF1Q9BSM1 259 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 PAM16Q9Y3D7 125 aa10.36□□□□□ -0.75
ERBB2-206ENST00000578373 A0A1B0GU03 582 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 NDUFB4O95168 129 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 OR2H2O95918 312 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 HRASP01112 189 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 FAM157CP0CG43 387 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 CRISP2P16562 243 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 TNFAIP6P98066 277 aaPredicted RBP10.35□□□□□ -0.75
ERBB2-206ENST00000578373 VAMP3Q15836 100 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 TGIF2LXQ8IUE1 241 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 FGFRL1Q8N441 504 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 OR10S1Q8NGN2 331 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 OR10G8Q8NGN5 311 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 DLL3Q9NYJ7 618 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 TRAV38-1A0A0B4J264 116 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 RBP4P02753 201 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 IER3P46695 156 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 CSN1S1P47710 185 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 B2MP61769 119 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 PAX5Q02548 391 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 FNDC7Q5VTL7 733 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 DHRS7BQ6IAN0 325 aaPredicted RBP10.35□□□□□ -0.75
ERBB2-206ENST00000578373 OR4A4PQ8NGN8 299 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 SAP25Q8TEE9 199 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 RPRMQ9NS64 109 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 ZNF253O75346 499 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 COL4A6Q14031 1691 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 KHDC3LQ587J8 217 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 TRAT1Q6PIZ9 186 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 VKORC1L1Q8N0U8 176 aa10.35□□□□□ -0.75
ERBB2-206ENST00000578373 BARX1Q9HBU1 254 aaPredicted RBP10.35□□□□□ -0.75
ERBB2-206ENST00000578373 LOC102723971A0A1B0GUV8 181 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 IGSF23A1L1A6 192 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 IGHV3-48P01763 117 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 ZNF735P0CB33 412 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 FCER1GP30273 86 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 SUCLG1P53597 346 aaKnown RBP10.34□□□□□ -0.75
ERBB2-206ENST00000578373 KLF3P57682 345 aaPredicted RBP10.34□□□□□ -0.75
ERBB2-206ENST00000578373 RHOBP62745 196 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 PMS2CLQ68D20 193 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 GFRALQ6UXV0 394 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 TMEM230Q96A57 120 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 ATXN7O15265 892 aaPredicted RBP10.34□□□□□ -0.75
ERBB2-206ENST00000578373 PITX3O75364 302 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 IGFBP3P17936 291 aaPredicted RBP10.34□□□□□ -0.75
ERBB2-206ENST00000578373 BPIFB3P59826 476 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 CFHR1Q03591 330 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 SELENOHQ8IZQ5 122 aaKnown RBP10.34□□□□□ -0.75
ERBB2-206ENST00000578373 CHCHD2Q9Y6H1 151 aaPredicted RBP10.34□□□□□ -0.75
ERBB2-206ENST00000578373 EFNA2O43921 213 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 HBZP02008 142 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 HSPB1P04792 205 aaKnown RBP10.34□□□□□ -0.75
ERBB2-206ENST00000578373 SLC25A5P05141 298 aaKnown RBP10.34□□□□□ -0.75
ERBB2-206ENST00000578373 DANCRP0C864 163 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 COX6A1P12074 109 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 TNFRSF1AP19438 455 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 UBE2L3P68036 154 aaKnown RBP10.34□□□□□ -0.75
ERBB2-206ENST00000578373 CCL8P80075 99 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 ARL16Q0P5N6 197 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 CXXC4Q9H2H0 198 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 RHBDL1O75783 438 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 WISP1O95388 367 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 PLAUP00749 431 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 MELTFP08582 738 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 TRIP6Q15654 476 aaKnown RBP10.34□□□□□ -0.75
ERBB2-206ENST00000578373 TUBD1Q9UJT1 453 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 RFNGQ9Y644 331 aa10.34□□□□□ -0.75
ERBB2-206ENST00000578373 A0A0A6YYD4 124 aa10.33□□□□□ -0.76
ERBB2-206ENST00000578373 CLDN14O95500 239 aa10.33□□□□□ -0.76
ERBB2-206ENST00000578373 WNT5AP41221 380 aa10.33□□□□□ -0.76
ERBB2-206ENST00000578373 PLAURQ03405 335 aa10.33□□□□□ -0.76
ERBB2-206ENST00000578373 BIVMQ86UB2 503 aa10.33□□□□□ -0.76
ERBB2-206ENST00000578373 OR1L4Q8NGR5 311 aa10.33□□□□□ -0.76
ERBB2-206ENST00000578373 NOTCH2Q04721 2471 aa10.33□□□□□ -0.76
ERBB2-206ENST00000578373 OOEPA6NGQ2 149 aa10.33□□□□□ -0.76
ERBB2-206ENST00000578373 NDUFB3O43676 98 aa10.33□□□□□ -0.76
ERBB2-206ENST00000578373 NPIPB7O75200 414 aa10.33□□□□□ -0.76
ERBB2-206ENST00000578373 SP1P08047 785 aa10.33□□□□□ -0.76
ERBB2-206ENST00000578373 S100A7P31151 101 aa10.33□□□□□ -0.76
ERBB2-206ENST00000578373 CTXND1A0A1B0GTU2 59 aa10.33□□□□□ -0.76
ERBB2-206ENST00000578373 ZG16O60844 167 aa10.33□□□□□ -0.76
ERBB2-206ENST00000578373 ACAA1P09110 424 aaPredicted RBP10.33□□□□□ -0.76
ERBB2-206ENST00000578373 COL10A1Q03692 680 aa10.33□□□□□ -0.76
ERBB2-206ENST00000578373 WNT9BO14905 357 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 NKX2-8O15522 239 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 IFI6P09912 130 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 GNB2P62879 340 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 MEF2BQ02080 365 aaPredicted RBP10.32□□□□□ -0.76
ERBB2-206ENST00000578373 FAM216AQ8WUB2 273 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 RBKSQ9H477 322 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 CACNA1AO00555 2505 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 WDR90Q96KV7 1748 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 HNRNPA3P51991 378 aaKnown RBP10.32□□□□□ -0.76
ERBB2-206ENST00000578373 H1FOOQ8IZA3 346 aaPredicted RBP10.32□□□□□ -0.76
ERBB2-206ENST00000578373 C11orf42Q8N5U0 333 aa10.32□□□□□ -0.76
ERBB2-206ENST00000578373 VN1R17PQ8TDU5 208 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms