RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SLC22A6Q4U2R8 563 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 ZFP1Q6P2D0 407 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 RPL22L1Q6P5R6 122 aaKnown RBP4.87□□□□□ -1.63
NUP88-212ENST00000576708 ZNF695Q8IW36 515 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 STPG2Q8N412 459 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 Q8N6K4 173 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 Q8N9W7 124 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 OR10V1Q8NGI7 309 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 OR4K15Q8NH41 348 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 OR1L1Q8NH94 360 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 HAVCR2Q8TDQ0 301 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 GPR148Q8TDV2 347 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 ST6GALNAC6Q969X2 333 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 TMEM106AQ96A25 262 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 Q96MT0 163 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 PRR25Q96S07 402 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 P2RX4Q99571 388 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 HSPB9Q9BQS6 159 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 C9orf16Q9BUW7 83 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 METTL9Q9H1A3 318 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 KLK15Q9H2R5 256 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 S100A14Q9HCY8 104 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 FGF20Q9NP95 211 aaPredicted RBP4.87□□□□□ -1.63
NUP88-212ENST00000576708 PCDHB16Q9NRJ7 776 aa4.87□□□□□ -1.63
NUP88-212ENST00000576708 RPL36Q9Y3U8 105 aaKnown RBP4.87□□□□□ -1.63
NUP88-212ENST00000576708 COL7A1Q02388 2944 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 PNMA8CA0A1B0GUJ8 204 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 A4D1N5 150 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 C12orf77C9JDV5 145 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 AIPO00170 330 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 CCL24O00175 119 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 OGG1O15527 345 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 MPZL2O60487 215 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 DUS4LO95620 317 aaKnown RBP4.86□□□□□ -1.63
NUP88-212ENST00000576708 SCGB1D1O95968 90 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 NUDT3O95989 172 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 IGFBP3P17936 291 aaPredicted RBP4.86□□□□□ -1.63
NUP88-212ENST00000576708 GZMHP20718 246 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 GALP22466 123 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 KCNJ3P48549 501 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 F2RL1P55085 397 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 RPS11P62280 158 aaKnown RBP eCLIP4.86□□□□□ -1.63
NUP88-212ENST00000576708 PPP3R1P63098 170 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 SLC35B1P78383 322 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 ADARB1P78563 741 aaKnown RBP4.86□□□□□ -1.63
NUP88-212ENST00000576708 PAX5Q02548 391 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 GNMTQ14749 295 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 KLHL22Q53GT1 634 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 CT45A1Q5HYN5 189 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 ZNF497Q6ZNH5 498 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 SLC16A12Q6ZSM3 486 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 Q6ZWC4 215 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 FOXRED2Q8IWF2 684 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 ZNF439Q8NDP4 499 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 TMEM104Q8NE00 496 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 OR10A7Q8NGE5 316 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 OR51D1Q8NGF3 324 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 OR2T10Q8NGZ9 312 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 CT45A3Q8NHU0 189 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 NEK7Q8TDX7 302 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 RTN4IP1Q8WWV3 396 aaPredicted RBP4.86□□□□□ -1.63
NUP88-212ENST00000576708 DPF1Q92782 380 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 GHSRQ92847 366 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 MUL1Q969V5 352 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 RITA1Q96K30 269 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 S1PR3Q99500 378 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 ZNF184Q99676 751 aaPredicted RBP4.86□□□□□ -1.63
NUP88-212ENST00000576708 ASCL2Q99929 193 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 B9D2Q9BPU9 175 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 ABCG5Q9H222 651 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 SLC25A32Q9H2D1 315 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 BANF2Q9H503 90 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 DCLRE1BQ9H816 532 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 TMEM138Q9NPI0 162 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 PLSCR3Q9NRY6 295 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 ZFP57Q9NU63 452 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 BABAM2Q9NXR7 383 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 IL36GQ9NZH8 169 aa4.86□□□□□ -1.63
NUP88-212ENST00000576708 TRBV5-5A0A0J9YX44 114 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 ORC5O43913 435 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 MOSP00540 346 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 HBZP02008 142 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 CD2P06729 351 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 GTF2F2P13984 249 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 RCC1P18754 421 aaPredicted RBP4.85□□□□□ -1.63
NUP88-212ENST00000576708 CNTFRP26992 372 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 TIRAPP58753 221 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 GPR50Q13585 617 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 PNLIPRP3Q17RR3 467 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 LRRC36Q1X8D7 754 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 MPV17LQ2QL34 196 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 Q3ZCU0 254 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 CCDC58Q4VC31 144 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 NHLRC3Q5JS37 347 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 SYT6Q5T7P8 510 aaPredicted RBP4.85□□□□□ -1.63
NUP88-212ENST00000576708 DMKNQ6E0U4 476 aaPredicted RBP4.85□□□□□ -1.63
NUP88-212ENST00000576708 TEX38Q6PEX7 206 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 TRAT1Q6PIZ9 186 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 GLIPR1L1Q6UWM5 242 aa4.85□□□□□ -1.63
NUP88-212ENST00000576708 TMPRSS11AQ6ZMR5 421 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms