RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 GFI1BQ5VTD9 330 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 LYG1Q8N1E2 194 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 HIST3H2BBQ8N257 126 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 MYLKQ15746 1914 aa11.32□□□□□ -0.6
PCDHGB3-201ENST00000576222 TDRD6O60522 2096 aaKnown RBP11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 A0A0J9YW62 118 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 OR5AL1P0C617 328 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 CCL20P78556 96 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 TGIF2LYQ8IUE0 185 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 SLC22A18ASQ8N1D0 253 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 FGFRL1Q8N441 504 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 ADH4P08319 380 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 FGF5P12034 268 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 S100A7P31151 101 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 HYAL1Q12794 435 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 C1orf53Q5VUE5 145 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 OR8I2Q8N0Y5 310 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 CADM4Q8NFZ8 388 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 OR10X1Q8NGY0 326 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 RSPO3Q9BXY4 272 aaPredicted RBP11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 SIT1Q9Y3P8 196 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 TRGV10A0A0A0MS01 117 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 SRFP11831 508 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 LEMD1Q68G75 181 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 HIST1H2BLQ99880 126 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 OR1A1Q9P1Q5 309 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 FOXD3Q9UJU5 478 aaPredicted RBP11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 CSN3P07498 182 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 LIFP15018 202 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 RAB7AP51149 207 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 TMEM251Q8N6I4 163 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 PCED1AQ9H1Q7 454 aa11.31□□□□□ -0.6
PCDHGB3-201ENST00000576222 LRRC30A6NM36 301 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 DNPH1O43598 174 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 HPRT1P00492 218 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 IGHV4-34P06331 123 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 RTP5Q14D33 572 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 STPG1Q5TH74 334 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 FAM166AQ6J272 317 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 SLC23A3Q6PIS1 610 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 TEPPQ6URK8 271 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 OR4S2Q8NH73 311 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 ABHD3Q8WU67 409 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 IL19Q9UHD0 177 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 CNIH1O95406 144 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 HAND1O96004 215 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 CXCL1P09341 107 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 LCN2P80188 198 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 RNPS1Q15287 305 aaKnown RBP11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 WFDC1Q9HC57 220 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 C2CD4DB7Z1M9 353 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 FAM90A26D6RGX4 464 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 KIR2DS2P43631 304 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 MFAP2P55001 183 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 SUPT4H1P63272 117 aaKnown RBP11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 RPL24P83731 157 aaKnown RBP11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 PET117Q6UWS5 81 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 DMRTA2Q96SC8 542 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 PARD6GQ9BYG4 376 aaPredicted RBP11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 TRAV38-1A0A0B4J264 116 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 VENTXO95231 258 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 EGR1P18146 543 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 IL11RAQ14626 422 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 PMCHL1Q16048 86 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 CEACAM21Q3KPI0 293 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 PXMP4Q9Y6I8 212 aa11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 MTCL1Q9Y4B5 1905 aaKnown RBP11.3□□□□□ -0.6
PCDHGB3-201ENST00000576222 LDLRAD4O15165 306 aa11.29□□□□□ -0.6
PCDHGB3-201ENST00000576222 CHRNB4P30926 498 aa11.29□□□□□ -0.6
PCDHGB3-201ENST00000576222 OPRK1P41145 380 aa11.29□□□□□ -0.6
PCDHGB3-201ENST00000576222 C9orf50Q5SZB4 431 aa11.29□□□□□ -0.6
PCDHGB3-201ENST00000576222 BLNKQ8WV28 456 aa11.29□□□□□ -0.6
PCDHGB3-201ENST00000576222 BCL2L2Q92843 193 aaPredicted RBP11.29□□□□□ -0.6
PCDHGB3-201ENST00000576222 TMEM56Q96MV1 263 aa11.29□□□□□ -0.6
PCDHGB3-201ENST00000576222 FOXJ2Q9P0K8 574 aa11.29□□□□□ -0.6
PCDHGB3-201ENST00000576222 MPDU1O75352 247 aa11.29□□□□□ -0.6
PCDHGB3-201ENST00000576222 LSM10Q969L4 123 aaKnown RBP11.29□□□□□ -0.6
PCDHGB3-201ENST00000576222 QTRT1Q9BXR0 403 aaKnown RBP11.29□□□□□ -0.6
PCDHGB3-201ENST00000576222 MAP1LC3CQ9BXW4 147 aa11.29□□□□□ -0.6
PCDHGB3-201ENST00000576222 NPY1RP25929 384 aa11.29□□□□□ -0.6
PCDHGB3-201ENST00000576222 NPBWR2P48146 333 aa11.29□□□□□ -0.6
PCDHGB3-201ENST00000576222 OR2D3Q8NGH3 330 aa11.29□□□□□ -0.6
PCDHGB3-201ENST00000576222 BARX1Q9HBU1 254 aaPredicted RBP11.29□□□□□ -0.6
PCDHGB3-201ENST00000576222 UCP1P25874 307 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 GNB1P62873 340 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 TNFRSF9Q07011 255 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 SDK2Q58EX2 2172 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 FNDC7Q5VTL7 733 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 OR4A47Q6IF82 309 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 OR2V2Q96R30 315 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 TWSG1Q9GZX9 223 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 SHISA7A6NL88 538 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 WDR74Q6RFH5 385 aaPredicted RBP11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 TUSC5Q8IXB3 177 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 OR2Z1Q8NG97 314 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 NPVFQ9HCQ7 196 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 TIMM9Q9Y5J7 89 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 PMS2P1A4D2B8 440 aa11.28□□□□□ -0.6
PCDHGB3-201ENST00000576222 HLA-DQA1P01909 254 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms