RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 HBG2P69892 147 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 MRPS21P82921 87 aaKnown RBP12.36□□□□□ -0.43
SCARF1-209ENST00000576012 ZNF816Q0VGE8 651 aaPredicted RBP12.36□□□□□ -0.43
SCARF1-209ENST00000576012 RAB35Q15286 201 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 ZNF114Q8NC26 417 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 SGMS2Q8NHU3 365 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 SPACA9Q96E40 222 aaPredicted RBP12.36□□□□□ -0.43
SCARF1-209ENST00000576012 FRMD6-AS1P0C7T7 363 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 OTX1P32242 354 aaPredicted RBP12.36□□□□□ -0.43
SCARF1-209ENST00000576012 ATP5G3P48201 142 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 LINC00205P59089 165 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 KRTDAPP60985 99 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 SLC35B1P78383 322 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 ERASQ7Z444 233 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 ZIC4Q8N9L1 334 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 OR5L2Q8NGL0 311 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 DNASE2BQ8WZ79 361 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 PLPPR2Q96GM1 343 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 WDR61Q9GZS3 305 aaKnown RBP12.36□□□□□ -0.43
SCARF1-209ENST00000576012 ZNF576Q9H609 170 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 ZDHHC11Q9H8X9 412 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 TRAV38-1A0A0B4J264 116 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 ETV2O00321 342 aaPredicted RBP12.36□□□□□ -0.43
SCARF1-209ENST00000576012 SIAH2O43255 324 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 SYNGR3O43761 229 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 SCRG1O75711 98 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 ACTL10Q5JWF8 245 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 C1orf194Q5T5A4 169 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 TSTD1Q8NFU3 115 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 SAMD10Q9BYL1 202 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 TCFL5Q9UL49 500 aa12.36□□□□□ -0.43
SCARF1-209ENST00000576012 C11orf94C9JXX5 98 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 RAB4AP20338 218 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 S100GP29377 79 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 HOXA4Q00056 320 aaPredicted RBP12.35□□□□□ -0.43
SCARF1-209ENST00000576012 LRRC75BQ2VPJ9 315 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 DNLZQ5SXM8 178 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 ZNF709Q8N972 641 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 ACY3Q96HD9 319 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 RAB40CQ96S21 281 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 PTRH2Q9Y3E5 179 aaKnown RBP12.35□□□□□ -0.43
SCARF1-209ENST00000576012 TRAV1-1A0A0B4J248 108 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 AQP7O14520 342 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 IGKV1-5P01602 117 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 NPPCP23582 126 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 ADMP35318 185 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 TIPARPQ7Z3E1 657 aaKnown RBP12.35□□□□□ -0.43
SCARF1-209ENST00000576012 CMTM2Q8TAZ6 248 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 MBD3L1Q8WWY6 194 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 PSMF1Q92530 271 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 MTCH1Q9NZJ7 389 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 CXCL13O43927 109 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 SERPINA7P05543 415 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 CRYGSP22914 178 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 OR10J1P30954 320 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 CEACAM6P40199 344 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 SRYQ05066 204 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 PRR31Q5SQ13 230 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 FAM27BQ5VT28 67 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 ETFRF1Q6IPR1 90 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 AAED1Q7RTV5 226 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 ATOH7Q8N100 152 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 C11orf42Q8N5U0 333 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 ZDHHC16Q969W1 377 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 CLDN23Q96B33 292 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 LPAR2Q9HBW0 351 aa12.35□□□□□ -0.43
SCARF1-209ENST00000576012 TNRC18O15417 2968 aaPredicted RBP12.34□□□□□ -0.43
SCARF1-209ENST00000576012 SLC17A3O00476 420 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 MSX1P28360 303 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 LTBRP36941 435 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 EDDM3BP56851 147 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 MMDQ15546 238 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 ACOT6Q3I5F7 207 aaPredicted RBP12.34□□□□□ -0.43
SCARF1-209ENST00000576012 KIAA1644Q3SXP7 199 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 KCNIP4Q6PIL6 250 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 BAGE3Q86Y29 109 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 BAGE2Q86Y30 109 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 OR5D13Q8NGL4 314 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 PARD6GQ9BYG4 376 aaPredicted RBP12.34□□□□□ -0.43
SCARF1-209ENST00000576012 H0Y980 276 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 TRAPPC2LH3BP13 241 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 CIDEAO60543 219 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 G6PCP35575 357 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 PPP1CBP62140 327 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 PRDX4Q13162 271 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 IFI44Q8TCB0 444 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 BTF3L4Q96K17 158 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 P2RX4Q99571 388 aa12.34□□□□□ -0.43
SCARF1-209ENST00000576012 RYDENQ9NUL5 291 aaKnown RBP12.34□□□□□ -0.43
SCARF1-209ENST00000576012 C5orf49A4QMS7 147 aa12.33□□□□□ -0.44
SCARF1-209ENST00000576012 CCKARP32238 428 aa12.33□□□□□ -0.44
SCARF1-209ENST00000576012 SPATA46Q5T0L3 261 aa12.33□□□□□ -0.44
SCARF1-209ENST00000576012 Q6ZWC4 215 aa12.33□□□□□ -0.44
SCARF1-209ENST00000576012 RABEPKQ7Z6M1 372 aa12.33□□□□□ -0.44
SCARF1-209ENST00000576012 FOXJ2Q9P0K8 574 aa12.33□□□□□ -0.44
SCARF1-209ENST00000576012 ATP23Q9Y6H3 246 aa12.33□□□□□ -0.44
SCARF1-209ENST00000576012 hCG_38984A0A1B0GV85 526 aa12.33□□□□□ -0.44
SCARF1-209ENST00000576012 LMO7DNF2Z398 122 aa12.33□□□□□ -0.44
SCARF1-209ENST00000576012 ASPHD1Q5U4P2 390 aa12.33□□□□□ -0.44
SCARF1-209ENST00000576012 GTF3C1Q12789 2109 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms