RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 SAA2-SAA4A0A096LPE2 208 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 VGLL3A8MV65 326 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 H3BUX3 64 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 CLDN34H7C241 214 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 TXNL1O43396 289 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 VENTXO95231 258 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 IGHV4-59P01825 116 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 PMP2P02689 132 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 OR8U9P0C7N5 309 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 SAA2P0DJI9 122 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-217ENST00000575711 OR5H8P0DN80 308 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 PTBP1P26599 531 aaKnown RBP eCLIP11.28□□□□□ -0.6
RPAIN-217ENST00000575711 BRS3P32247 399 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 REG1BP48304 166 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 RIPPLY3P57055 190 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 SSBP1Q04837 148 aaKnown RBP11.28□□□□□ -0.6
RPAIN-217ENST00000575711 ZNF816Q0VGE8 651 aaPredicted RBP11.28□□□□□ -0.6
RPAIN-217ENST00000575711 DIAPH2-AS1Q14236 149 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 SLC9A3R2Q15599 337 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 ACTBL2Q562R1 376 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 TGIF2LXQ8IUE1 241 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 LYSMD2Q8IV50 215 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 ODF3L1Q8IXM7 274 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 ZDHHC22Q8N966 263 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 OR8U1Q8NH10 309 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 ST6GALNAC6Q969X2 333 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 ABHD14BQ96IU4 210 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 DUX5Q96PT3 197 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 S1PR3Q99500 378 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 AGMATQ9BSE5 352 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 ESM1Q9NQ30 184 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 TNFRSF19Q9NS68 423 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 EHFQ9NZC4 300 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 PTTG2Q9NZH5 202 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 ZNF221Q9UK13 617 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 V9GYH0 126 aa11.28□□□□□ -0.6
RPAIN-217ENST00000575711 A0A1W2PPI3 338 aa11.27□□□□□ -0.61
RPAIN-217ENST00000575711 ZNF736B4DX44 427 aaPredicted RBP11.27□□□□□ -0.61
RPAIN-217ENST00000575711 GSTZ1O43708 216 aaPredicted RBP11.27□□□□□ -0.61
RPAIN-217ENST00000575711 LANCL1O43813 399 aa11.27□□□□□ -0.61
RPAIN-217ENST00000575711 FCGR2CP31995 323 aa11.27□□□□□ -0.61
RPAIN-217ENST00000575711 HRH1P35367 487 aa11.27□□□□□ -0.61
RPAIN-217ENST00000575711 ETV6P41212 452 aa11.27□□□□□ -0.61
RPAIN-217ENST00000575711 GPR12P47775 334 aa11.27□□□□□ -0.61
RPAIN-217ENST00000575711 DYNLT3P51808 116 aa11.27□□□□□ -0.61
RPAIN-217ENST00000575711 PYDC2Q56P42 97 aa11.27□□□□□ -0.61
RPAIN-217ENST00000575711 FAM71F2Q6NXP2 309 aa11.27□□□□□ -0.61
RPAIN-217ENST00000575711 ZNF833PQ6ZTB9 187 aa11.27□□□□□ -0.61
RPAIN-217ENST00000575711 OVCH2Q7RTZ1 564 aa11.27□□□□□ -0.61
RPAIN-217ENST00000575711 PRIMA1Q86XR5 153 aa11.27□□□□□ -0.61
RPAIN-217ENST00000575711 RTN4IP1Q8WWV3 396 aaPredicted RBP11.27□□□□□ -0.61
RPAIN-217ENST00000575711 OR2D2Q9H210 308 aa11.27□□□□□ -0.61
RPAIN-217ENST00000575711 RNF150Q9ULK6 438 aa11.27□□□□□ -0.61
RPAIN-217ENST00000575711 OR2W1Q9Y3N9 320 aa11.27□□□□□ -0.61
RPAIN-217ENST00000575711 IGHV1-3A0A0C4DH29 117 aa11.26□□□□□ -0.61
RPAIN-217ENST00000575711 TRIM77I1YAP6 450 aa11.26□□□□□ -0.61
RPAIN-217ENST00000575711 TIMM23O14925 209 aa11.26□□□□□ -0.61
RPAIN-217ENST00000575711 TBPP20226 339 aa11.26□□□□□ -0.61
RPAIN-217ENST00000575711 RFX2P48378 723 aa11.26□□□□□ -0.61
RPAIN-217ENST00000575711 RAB13P51153 203 aa11.26□□□□□ -0.61
RPAIN-217ENST00000575711 LUMP51884 338 aaPredicted RBP11.26□□□□□ -0.61
RPAIN-217ENST00000575711 TAS2R19P59542 299 aa11.26□□□□□ -0.61
RPAIN-217ENST00000575711 UBA52P62987 128 aaKnown RBP11.26□□□□□ -0.61
RPAIN-217ENST00000575711 DYRK1AQ13627 763 aa11.26□□□□□ -0.61
RPAIN-217ENST00000575711 ZNF79Q15937 498 aa11.26□□□□□ -0.61
RPAIN-217ENST00000575711 MOB3BQ86TA1 216 aa11.26□□□□□ -0.61
RPAIN-217ENST00000575711 DRAM1Q8N682 238 aa11.26□□□□□ -0.61
RPAIN-217ENST00000575711 TMEM229BQ8NBD8 167 aa11.26□□□□□ -0.61
RPAIN-217ENST00000575711 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.26□□□□□ -0.61
RPAIN-217ENST00000575711 OR56B4Q8NH76 319 aa11.26□□□□□ -0.61
RPAIN-217ENST00000575711 GIMAP1Q8WWP7 306 aa11.26□□□□□ -0.61
RPAIN-217ENST00000575711 TAS2R8Q9NYW2 309 aa11.26□□□□□ -0.61
RPAIN-217ENST00000575711 ZNF107Q9UII5 783 aaPredicted RBP11.26□□□□□ -0.61
RPAIN-217ENST00000575711 VPREB3Q9UKI3 123 aa11.26□□□□□ -0.61
RPAIN-217ENST00000575711 RBMX2Q9Y388 322 aaKnown RBP11.26□□□□□ -0.61
RPAIN-217ENST00000575711 CUBNO60494 3623 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 J3QRK9 145 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 TUSC2O75896 110 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 PPYP01298 95 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 RNASE1P07998 156 aaKnown RBP11.25□□□□□ -0.61
RPAIN-217ENST00000575711 CSF1P09603 554 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 AADACP22760 399 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 HERV-K104P61576 105 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 TSPAN5P62079 268 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 LY6EQ16553 131 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 RPL39P5Q59GN2 51 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 RNASE10Q5GAN6 216 aaKnown RBP11.25□□□□□ -0.61
RPAIN-217ENST00000575711 VAX1Q5SQQ9 334 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 LINC00299Q6ZSB3 139 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 Q8N402 240 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 OR6F1Q8NGZ6 308 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 PIFOQ8TCI5 191 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 CAPSLQ8WWF8 208 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 ZNF2Q9BSG1 426 aaPredicted RBP11.25□□□□□ -0.61
RPAIN-217ENST00000575711 MRPL20Q9BYC9 149 aaKnown RBP11.25□□□□□ -0.61
RPAIN-217ENST00000575711 CHIAQ9BZP6 476 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 PITPNC1Q9UKF7 332 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 GAB2Q9UQC2 676 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 TCF19Q9Y242 345 aa11.25□□□□□ -0.61
RPAIN-217ENST00000575711 MXRA5Q9NR99 2828 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms