RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 TMEM68Q96MH6 324 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 MBNL3Q9NUK0 354 aaKnown RBP6.85□□□□□ -1.31
SMG6-218ENST00000575454 PEMTQ9UBM1 199 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 CKLFQ9UBR5 152 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 STEAP1Q9UHE8 339 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 PEX16Q9Y5Y5 336 aa6.85□□□□□ -1.31
SMG6-218ENST00000575454 SAA2-SAA4A0A096LPE2 208 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 H7C2Y5 167 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 FCN1O00602 326 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 GPX5O75715 221 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 SPDEFO95238 335 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 BRI3O95415 125 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 MAS1P04201 325 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 SAA2P0DJI9 122 aaPredicted RBP6.84□□□□□ -1.31
SMG6-218ENST00000575454 FUT3P21217 361 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 OR3A3P47888 321 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 CD81P60033 236 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 ADARB1P78563 741 aaKnown RBP6.84□□□□□ -1.31
SMG6-218ENST00000575454 RIPK1Q13546 671 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 CCDC58Q4VC31 144 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 C6orf141Q5SZD1 244 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 FAM131AQ6UXB0 335 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 GHSRQ92847 366 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 USMG5Q96IX5 58 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 Q96MT0 163 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 TSNAXQ99598 290 aaKnown RBP6.84□□□□□ -1.31
SMG6-218ENST00000575454 FAM110AQ9BQ89 295 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 NEURL2Q9BR09 285 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 FAM103A1Q9BTL3 118 aaKnown RBP6.84□□□□□ -1.31
SMG6-218ENST00000575454 ST6GALNAC5Q9BVH7 336 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 ISG20L2Q9H9L3 353 aaKnown RBP6.84□□□□□ -1.31
SMG6-218ENST00000575454 RETNQ9HD89 108 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 ABRACLQ9P1F3 81 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 METTL1Q9UBP6 276 aaKnown RBP6.84□□□□□ -1.31
SMG6-218ENST00000575454 PEF1Q9UBV8 284 aaKnown RBP6.84□□□□□ -1.31
SMG6-218ENST00000575454 WASHC3Q9Y3C0 194 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 AP4S1Q9Y587 144 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 ORC6Q9Y5N6 252 aa6.84□□□□□ -1.31
SMG6-218ENST00000575454 ANKRD34BA5PLL1 514 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 NUPR2A6NF83 97 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 E9PI62 339 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 CSN3P07498 182 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 CT45A6P0DMU7 189 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 CT45A5P0DMU8 189 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 CT45A7P0DMV0 189 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 CAPGP40121 348 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 GNMTQ14749 295 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 FXYD3Q14802 87 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 PSG5Q15238 335 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 RPEL1Q2QD12 228 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 RPL22L1Q6P5R6 122 aaKnown RBP6.83□□□□□ -1.32
SMG6-218ENST00000575454 OR5AN1Q8NGI8 311 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 SNAPC3Q92966 411 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 CENPNQ96H22 339 aaPredicted RBP6.83□□□□□ -1.32
SMG6-218ENST00000575454 CLCC1Q96S66 551 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 ZNF184Q99676 751 aaPredicted RBP6.83□□□□□ -1.32
SMG6-218ENST00000575454 PLEKHA3Q9HB20 300 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 ERVK13-1Q9NX77 482 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 SLC23A1Q9UHI7 598 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 DNAH10Q8IVF4 4471 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 DSCAML1Q8TD84 2053 aa6.83□□□□□ -1.32
SMG6-218ENST00000575454 A0A0B4J203 849 aa6.82□□□□□ -1.32
SMG6-218ENST00000575454 A0A1W2PP11 408 aa6.82□□□□□ -1.32
SMG6-218ENST00000575454 CXorf65A6NEN9 183 aa6.82□□□□□ -1.32
SMG6-218ENST00000575454 H0YJW9 148 aa6.82□□□□□ -1.32
SMG6-218ENST00000575454 CA2P00918 260 aa6.82□□□□□ -1.32
SMG6-218ENST00000575454 CPEP16870 476 aa6.82□□□□□ -1.32
SMG6-218ENST00000575454 LGALS7P47929 136 aa6.82□□□□□ -1.32
SMG6-218ENST00000575454 MECP2P51608 486 aaKnown RBP6.82□□□□□ -1.32
SMG6-218ENST00000575454 DMKNQ6E0U4 476 aaPredicted RBP6.82□□□□□ -1.32
SMG6-218ENST00000575454 ZNF343Q6P1L6 599 aa6.82□□□□□ -1.32
SMG6-218ENST00000575454 GLIPR1L1Q6UWM5 242 aa6.82□□□□□ -1.32
SMG6-218ENST00000575454 AMIGO2Q86SJ2 522 aa6.82□□□□□ -1.32
SMG6-218ENST00000575454 CDH26Q8IXH8 852 aa6.82□□□□□ -1.32
SMG6-218ENST00000575454 GRPEL2Q8TAA5 225 aa6.82□□□□□ -1.32
SMG6-218ENST00000575454 KCTD12Q96CX2 325 aaKnown RBP6.82□□□□□ -1.32
SMG6-218ENST00000575454 SELENOIQ9C0D9 397 aa6.82□□□□□ -1.32
SMG6-218ENST00000575454 IFI27L2Q9H2X8 130 aa6.82□□□□□ -1.32
SMG6-218ENST00000575454 FAM53CQ9NYF3 392 aa6.82□□□□□ -1.32
SMG6-218ENST00000575454 OAZ3Q9UMX2 235 aa6.82□□□□□ -1.32
SMG6-218ENST00000575454 GAB2Q9UQC2 676 aa6.82□□□□□ -1.32
SMG6-218ENST00000575454 KLK5Q9Y337 293 aaPredicted RBP6.82□□□□□ -1.32
SMG6-218ENST00000575454 UBE2QL1A1L167 161 aa6.81□□□□□ -1.32
SMG6-218ENST00000575454 OR11H12B2RN74 326 aa6.81□□□□□ -1.32
SMG6-218ENST00000575454 ITGB1BP1O14713 200 aa6.81□□□□□ -1.32
SMG6-218ENST00000575454 PDCD6O75340 191 aa6.81□□□□□ -1.32
SMG6-218ENST00000575454 CRTAPO75718 401 aaPredicted RBP6.81□□□□□ -1.32
SMG6-218ENST00000575454 NDUFB8O95169 186 aa6.81□□□□□ -1.32
SMG6-218ENST00000575454 KIAA2026Q5HYC2 2103 aa6.81□□□□□ -1.32
SMG6-218ENST00000575454 FAM209BQ5JX69 171 aa6.81□□□□□ -1.32
SMG6-218ENST00000575454 TMPRSS11AQ6ZMR5 421 aa6.81□□□□□ -1.32
SMG6-218ENST00000575454 SLC16A13Q7RTY0 426 aa6.81□□□□□ -1.32
SMG6-218ENST00000575454 JAGN1Q8N5M9 183 aa6.81□□□□□ -1.32
SMG6-218ENST00000575454 DEFB125Q8N687 156 aa6.81□□□□□ -1.32
SMG6-218ENST00000575454 OR5T1Q8NG75 326 aa6.81□□□□□ -1.32
SMG6-218ENST00000575454 MRPL30Q8TCC3 161 aaKnown RBP6.81□□□□□ -1.32
SMG6-218ENST00000575454 IL1F10Q8WWZ1 152 aa6.81□□□□□ -1.32
SMG6-218ENST00000575454 SULT4A1Q9BR01 284 aa6.81□□□□□ -1.32
SMG6-218ENST00000575454 TINAGL1Q9GZM7 467 aaPredicted RBP6.81□□□□□ -1.32
SMG6-218ENST00000575454 SRD5A3Q9H8P0 318 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms