RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 ANKRD20A5PA0PJZ0 165 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 HSD17B6O14756 317 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 RAB29O14966 203 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 TXNL1O43396 289 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 SSX2Q16385 188 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 FAM71F2Q6NXP2 309 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 STEAP1BQ6NZ63 245 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 LDLRAD3Q86YD5 345 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 ARRDC1Q8N5I2 433 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 C17orf50Q8WW18 174 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 GIMAP1Q8WWP7 306 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 DEDD2Q8WXF8 326 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 ST6GALNAC6Q969X2 333 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 MEGF9Q9H1U4 602 aa13.83□□□□□ -0.2
NUP88-210ENST00000574867 RBM7Q9Y580 266 aaKnown RBP13.83□□□□□ -0.2
NUP88-210ENST00000574867 LANCL1O43813 399 aa13.82□□□□□ -0.2
NUP88-210ENST00000574867 OR8U9P0C7N5 309 aa13.82□□□□□ -0.2
NUP88-210ENST00000574867 AKAIN1P0CW23 69 aa13.82□□□□□ -0.2
NUP88-210ENST00000574867 LUMP51884 338 aaPredicted RBP13.82□□□□□ -0.2
NUP88-210ENST00000574867 ZNF816Q0VGE8 651 aaPredicted RBP13.82□□□□□ -0.2
NUP88-210ENST00000574867 MEF2DQ14814 521 aa13.82□□□□□ -0.2
NUP88-210ENST00000574867 TRIQKQ629K1 86 aa13.82□□□□□ -0.2
NUP88-210ENST00000574867 RBMS3Q6XE24 437 aaKnown RBP13.82□□□□□ -0.2
NUP88-210ENST00000574867 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.82□□□□□ -0.2
NUP88-210ENST00000574867 OR8U1Q8NH10 309 aa13.82□□□□□ -0.2
NUP88-210ENST00000574867 ZNF221Q9UK13 617 aa13.82□□□□□ -0.2
NUP88-210ENST00000574867 SOX21Q9Y651 276 aaPredicted RBP13.82□□□□□ -0.2
NUP88-210ENST00000574867 SAA2-SAA4A0A096LPE2 208 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 RAB3DO95716 219 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 PPYP01298 95 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 IFNA6P05013 189 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 SAA2P0DJI9 122 aaPredicted RBP13.81□□□□□ -0.2
NUP88-210ENST00000574867 TSPAN5P62079 268 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 AANATQ16613 207 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 DHRS11Q6UWP2 260 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 TMEM17Q86X19 198 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 ODF3L1Q8IXM7 274 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 OR6F1Q8NGZ6 308 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 ZNF418Q8TF45 676 aaPredicted RBP13.81□□□□□ -0.2
NUP88-210ENST00000574867 ZDHHC16Q969W1 377 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 ZNF48Q96MX3 618 aaPredicted RBP13.81□□□□□ -0.2
NUP88-210ENST00000574867 OR2D2Q9H210 308 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 HILPDAQ9Y5L2 63 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 MDFIC2A0A1B0GVS7 189 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 M0QYG6 137 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 SLC22A5O76082 557 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 GAPDHP04406 335 aaKnown RBP13.81□□□□□ -0.2
NUP88-210ENST00000574867 AADACP22760 399 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 CD40LGP29965 261 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 GPR12P47775 334 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 HERV-K104P61576 105 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 ZNF846Q147U1 533 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 ZNF660Q6AZW8 331 aaPredicted RBP13.81□□□□□ -0.2
NUP88-210ENST00000574867 ZNF833PQ6ZTB9 187 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 OR8H3Q8N146 312 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 DYNAPQ8N1N2 210 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 TOMM5Q8N4H5 51 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 SIGLECL1Q8N7X8 197 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 S1PR3Q99500 378 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 SDHCQ99643 169 aaPredicted RBP13.81□□□□□ -0.2
NUP88-210ENST00000574867 CCDC32Q9BV29 185 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 TINAGL1Q9GZM7 467 aaPredicted RBP13.81□□□□□ -0.2
NUP88-210ENST00000574867 OCEL1Q9H607 264 aa13.81□□□□□ -0.2
NUP88-210ENST00000574867 MXRA5Q9NR99 2828 aa13.8□□□□□ -0.2
NUP88-210ENST00000574867 FAUP35544 74 aaKnown RBP13.8□□□□□ -0.2
NUP88-210ENST00000574867 TGIF2LXQ8IUE1 241 aa13.8□□□□□ -0.2
NUP88-210ENST00000574867 RTN4IP1Q8WWV3 396 aaPredicted RBP13.8□□□□□ -0.2
NUP88-210ENST00000574867 ABHD14BQ96IU4 210 aa13.8□□□□□ -0.2
NUP88-210ENST00000574867 ZNF2Q9BSG1 426 aaPredicted RBP13.8□□□□□ -0.2
NUP88-210ENST00000574867 GAB2Q9UQC2 676 aa13.8□□□□□ -0.2
NUP88-210ENST00000574867 INPP1P49441 399 aa13.79□□□□□ -0.2
NUP88-210ENST00000574867 DYNLT3P51808 116 aa13.79□□□□□ -0.2
NUP88-210ENST00000574867 PPP5CP53041 499 aa13.79□□□□□ -0.2
NUP88-210ENST00000574867 KLF9Q13886 244 aaPredicted RBP13.79□□□□□ -0.2
NUP88-210ENST00000574867 LRRC75BQ2VPJ9 315 aa13.79□□□□□ -0.2
NUP88-210ENST00000574867 Q6YL49 198 aa13.79□□□□□ -0.2
NUP88-210ENST00000574867 ZNF645Q8N7E2 425 aa13.79□□□□□ -0.2
NUP88-210ENST00000574867 MOB3AQ96BX8 217 aa13.79□□□□□ -0.2
NUP88-210ENST00000574867 RNF150Q9ULK6 438 aa13.79□□□□□ -0.2
NUP88-210ENST00000574867 BAK1Q16611 211 aa13.79□□□□□ -0.2
NUP88-210ENST00000574867 LURAP1LQ8IV03 231 aa13.79□□□□□ -0.2
NUP88-210ENST00000574867 OR4D10Q8NGI6 311 aa13.79□□□□□ -0.2
NUP88-210ENST00000574867 OR4C16Q8NGL9 310 aa13.79□□□□□ -0.2
NUP88-210ENST00000574867 SSMEM1Q8WWF3 244 aa13.79□□□□□ -0.2
NUP88-210ENST00000574867 IGKV1D-13A0A0B4J2D9 117 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 A0A1W2PPI3 338 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 DISC1C4P0D8 188 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 AMY2AP04746 511 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 IGKV1-13P0DP09 117 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 IL7P13232 177 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 BRS3P32247 399 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 DIAPH2-AS1Q14236 149 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 MSMO1Q15800 293 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 BORCS5Q969J3 196 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 JMJD8Q96S16 334 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 ZNF251Q9BRH9 671 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 DPAGT1Q9H3H5 408 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 ABCB10Q9NRK6 738 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 A0A0A6YYJ9 748 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 IGHV1-3A0A0C4DH29 117 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms