RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 HTD2P86397 168 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 CT45A1Q5HYN5 189 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 TCTEX1D4Q5JR98 221 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 C6orf201Q7Z4U5 140 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 C5orf24Q7Z6I8 188 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 ZNF554Q86TJ5 538 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 C5orf56Q8N8D9 126 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 ZNF439Q8NDP4 499 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 OR4X2Q8NGF9 303 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 OR52L2PQ8NGH6 319 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 OR10V1Q8NGI7 309 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 OR6M1Q8NGM8 313 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 OR2T10Q8NGZ9 312 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 CT45A3Q8NHU0 189 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 MRPL30Q8TCC3 161 aaKnown RBP5.89□□□□□ -1.47
NUP88-205ENST00000572809 RTN4IP1Q8WWV3 396 aaPredicted RBP5.89□□□□□ -1.47
NUP88-205ENST00000572809 GALMQ96C23 342 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 CYYR1Q96J86 154 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 SULT4A1Q9BR01 284 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 URM1Q9BTM9 101 aaKnown RBP5.89□□□□□ -1.47
NUP88-205ENST00000572809 TM2D1Q9BX74 207 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 TMEM59Q9BXS4 323 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 PLGRKTQ9HBL7 147 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 ACOT13Q9NPJ3 140 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 PLEKHJ1Q9NW61 149 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 RAB26Q9ULW5 256 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 TSSC4Q9Y5U2 329 aaPredicted RBP5.89□□□□□ -1.47
NUP88-205ENST00000572809 VWFP04275 2813 aa5.89□□□□□ -1.47
NUP88-205ENST00000572809 A0A1W2PRX2 142 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 PSMB11A5LHX3 300 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 SERPINE3A8MV23 424 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 TMEM14DPA8MWL7 114 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 ZNF736B4DX44 427 aaPredicted RBP5.88□□□□□ -1.47
NUP88-205ENST00000572809 G3V4G9 280 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 SLC17A2O00624 439 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 TXNL1O43396 289 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 YPEL1O60688 119 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 RGS11O94810 467 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 MOSP00540 346 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 IGHG2P01859 326 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 RANBP1P43487 201 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 PSMD7P51665 324 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 ZNF137PP52743 207 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 QRFPP83859 136 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 FABP5Q01469 135 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 UNC119Q13432 240 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 C2orf76Q3KRA6 126 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 C10orf99Q6UWK7 81 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 OR2W3Q7Z3T1 314 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 TGIF2LXQ8IUE1 241 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 FAM89BQ8N5H3 189 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 OR51D1Q8NGF3 324 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 CHPT1Q8WUD6 406 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 YPEL2Q96QA6 119 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 GFI1Q99684 422 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 NICN1Q9BSH3 213 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 C11orf54Q9H0W9 315 aaPredicted RBP5.88□□□□□ -1.47
NUP88-205ENST00000572809 LPAR5Q9H1C0 372 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 KCNK15Q9H427 330 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 ABRACLQ9P1F3 81 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 JPT1Q9UK76 154 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 BLOC1S6Q9UL45 172 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 V9GY05 133 aa5.88□□□□□ -1.47
NUP88-205ENST00000572809 A0A0A6YYD4 124 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 LINC01548A6NM66 108 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 SOCS1O15524 211 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 LANCL1O43813 399 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 ATP6V1G2O95670 118 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 CALRP27797 417 aaKnown RBP5.87□□□□□ -1.47
NUP88-205ENST00000572809 PPP1CCP36873 323 aaKnown RBP5.87□□□□□ -1.47
NUP88-205ENST00000572809 VEGFCP49767 419 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 TMEM50BP56557 158 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 P2RY14Q15391 338 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 TBCEQ15813 527 aaPredicted RBP5.87□□□□□ -1.47
NUP88-205ENST00000572809 RAB11BQ15907 218 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 BEAN1Q3B7T3 259 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 LY6G6FQ5SQ64 297 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 ZNF880Q6PDB4 577 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 SLC35E3Q7Z769 313 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 ZNF329Q86UD4 541 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 FOXRED2Q8IWF2 684 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 IZUMO1Q8IYV9 350 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 Q8N6K4 173 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 Q8N9W7 124 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 WFDC9Q8NEX5 89 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 OR8H1Q8NGG4 311 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 SETD6Q8TBK2 473 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 IL1F10Q8WWZ1 152 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 FAM3DQ96BQ1 224 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 NOL4LQ96MY1 436 aaPredicted RBP5.87□□□□□ -1.47
NUP88-205ENST00000572809 S1PR3Q99500 378 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 RASL11BQ9BPW5 248 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 ABCG5Q9H222 651 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 RIMS4Q9H426 269 aaPredicted RBP5.87□□□□□ -1.47
NUP88-205ENST00000572809 CHMP1AQ9HD42 196 aaPredicted RBP5.87□□□□□ -1.47
NUP88-205ENST00000572809 PLSCR3Q9NRY6 295 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 LIN7CQ9NUP9 197 aaKnown RBP5.87□□□□□ -1.47
NUP88-205ENST00000572809 STEAP1Q9UHE8 339 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 LINC00527Q9UJ94 153 aa5.87□□□□□ -1.47
NUP88-205ENST00000572809 HSF4Q9ULV5 492 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms