RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 TMEM9BQ9NQ34 198 aa13.02□□□□□ -0.33
USP43-202ENST00000570475 XKRY2A2RUG3 117 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 SCGB1D1O95968 90 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 IGHV2-5P01817 119 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 TMEM251Q8N6I4 163 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 PLPPR1Q8TBJ4 325 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 RNF138Q8WVD3 245 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 PRDM14Q9GZV8 571 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 MSL2Q9HCI7 577 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 FUT9Q9Y231 359 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 A0A1B0GU03 582 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 LOC102723971A0A1B0GUV8 181 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 SH2D1BO14796 132 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 BSXQ3C1V8 233 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 SCRT1Q9BWW7 348 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 TTTY12Q9BZ98 90 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 EGLN1Q9GZT9 426 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 PATZ1Q9HBE1 687 aaKnown RBP13.01□□□□□ -0.33
USP43-202ENST00000570475 PSG11Q9UQ72 335 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 A0A087X0M5 115 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 A0A1B0GX30 115 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 LRP5LA4QPB2 252 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 ZNF705FA8MVS1 300 aaPredicted RBP13.01□□□□□ -0.33
USP43-202ENST00000570475 RAMP3O60896 148 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 ZNF705DP0CH99 300 aaPredicted RBP13.01□□□□□ -0.33
USP43-202ENST00000570475 ZNF705BP0CI00 300 aaPredicted RBP13.01□□□□□ -0.33
USP43-202ENST00000570475 GALR1P47211 349 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 PAX9P55771 341 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 MSMO1Q15800 293 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 Q3ZCU0 254 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 FOXL2NBQ6ZUU3 175 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 LINC00469Q8N7U9 141 aa13.01□□□□□ -0.33
USP43-202ENST00000570475 CHD3Q12873 2000 aaKnown RBP13.01□□□□□ -0.33
USP43-202ENST00000570475 A0A1B0GV90 55 aa13□□□□□ -0.33
USP43-202ENST00000570475 NAPSAO96009 420 aa13□□□□□ -0.33
USP43-202ENST00000570475 SLC10A1Q14973 349 aa13□□□□□ -0.33
USP43-202ENST00000570475 TBC1D28Q2M2D7 210 aa13□□□□□ -0.33
USP43-202ENST00000570475 ELOVL1Q9BW60 279 aa13□□□□□ -0.33
USP43-202ENST00000570475 RIMS4Q9H426 269 aaPredicted RBP13□□□□□ -0.33
USP43-202ENST00000570475 HEYLQ9NQ87 328 aaPredicted RBP13□□□□□ -0.33
USP43-202ENST00000570475 VAX2Q9UIW0 290 aa13□□□□□ -0.33
USP43-202ENST00000570475 RNF224P0DH78 156 aa13□□□□□ -0.33
USP43-202ENST00000570475 SSPNQ14714 243 aa13□□□□□ -0.33
USP43-202ENST00000570475 SSX7Q7RTT5 188 aa13□□□□□ -0.33
USP43-202ENST00000570475 H1FOOQ8IZA3 346 aaPredicted RBP13□□□□□ -0.33
USP43-202ENST00000570475 DRAM1Q8N682 238 aa13□□□□□ -0.33
USP43-202ENST00000570475 ARRDC1-AS1Q9H2J1 176 aa13□□□□□ -0.33
USP43-202ENST00000570475 PLSCR2Q9NRY7 297 aa13□□□□□ -0.33
USP43-202ENST00000570475 ATG2AQ2TAZ0 1938 aa13□□□□□ -0.33
USP43-202ENST00000570475 DNPH1O43598 174 aa13□□□□□ -0.33
USP43-202ENST00000570475 TIMM8AO60220 97 aaPredicted RBP13□□□□□ -0.33
USP43-202ENST00000570475 MEOX1P50221 254 aa13□□□□□ -0.33
USP43-202ENST00000570475 NANOS1Q8WY41 292 aaKnown RBP13□□□□□ -0.33
USP43-202ENST00000570475 GALMQ96C23 342 aa13□□□□□ -0.33
USP43-202ENST00000570475 IL36GQ9NZH8 169 aa13□□□□□ -0.33
USP43-202ENST00000570475 IL17BQ9UHF5 180 aa13□□□□□ -0.33
USP43-202ENST00000570475 ST8SIA5O15466 376 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 SPINK4O60575 86 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 ZG16O60844 167 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 PRAMEF6Q5VXH4 476 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 DHRS13Q6UX07 377 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 SLC35E3Q7Z769 313 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 OR10A7Q8NGE5 316 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 SCCPDHQ8NBX0 429 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 TAF15Q92804 592 aaKnown RBP eCLIP12.99□□□□□ -0.33
USP43-202ENST00000570475 DCTN5Q9BTE1 182 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 ZNF320A2RRD8 509 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 OPN1MWP04001 364 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 OPN1MW2P0DN77 364 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 OPN1MW3P0DN78 364 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 SLC25A6P12236 298 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 PMS2P11Q13670 270 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 BATFQ16520 125 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 PDLIM3Q53GG5 364 aaPredicted RBP12.99□□□□□ -0.33
USP43-202ENST00000570475 ABLIM2Q6H8Q1 611 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 ASCL4Q6XD76 172 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 OR5P3Q8WZ94 311 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 MALSU1Q96EH3 234 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 GPR87Q9BY21 358 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 OR51I2Q9H344 312 aa12.99□□□□□ -0.33
USP43-202ENST00000570475 IGKV1-5P01602 117 aa12.98□□□□□ -0.33
USP43-202ENST00000570475 IGHEP01854 428 aa12.98□□□□□ -0.33
USP43-202ENST00000570475 FAM78BQ5VT40 261 aa12.98□□□□□ -0.33
USP43-202ENST00000570475 VKORC1L1Q8N0U8 176 aa12.98□□□□□ -0.33
USP43-202ENST00000570475 ZNF525Q8N782 197 aa12.98□□□□□ -0.33
USP43-202ENST00000570475 SLC25A40Q8TBP6 338 aa12.98□□□□□ -0.33
USP43-202ENST00000570475 ABHD5Q8WTS1 349 aa12.98□□□□□ -0.33
USP43-202ENST00000570475 SEBOXQ9HB31 216 aaPredicted RBP12.98□□□□□ -0.33
USP43-202ENST00000570475 TRAV38-1A0A0B4J264 116 aa12.98□□□□□ -0.33
USP43-202ENST00000570475 PGPEP1LA6NFU8 196 aa12.98□□□□□ -0.33
USP43-202ENST00000570475 WNT5AP41221 380 aa12.98□□□□□ -0.33
USP43-202ENST00000570475 CATR1Q13166 79 aa12.98□□□□□ -0.33
USP43-202ENST00000570475 PCSK4Q6UW60 755 aa12.98□□□□□ -0.33
USP43-202ENST00000570475 OR51G1Q8NGK1 321 aa12.98□□□□□ -0.33
USP43-202ENST00000570475 S1PR2O95136 353 aa12.97□□□□□ -0.33
USP43-202ENST00000570475 CYB5R3P00387 301 aaPredicted RBP12.97□□□□□ -0.33
USP43-202ENST00000570475 PPP1CBP62140 327 aa12.97□□□□□ -0.33
USP43-202ENST00000570475 MEF2BQ02080 365 aaPredicted RBP12.97□□□□□ -0.33
USP43-202ENST00000570475 TFF3Q07654 80 aa12.97□□□□□ -0.33
USP43-202ENST00000570475 ZNF324BQ6AW86 544 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms