RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 CD200R1LQ6Q8B3 271 aa13.38□□□□□ -0.27
MAP1LC3B-208ENST00000570189 ZNF367Q7RTV3 350 aa13.38□□□□□ -0.27
MAP1LC3B-208ENST00000570189 PTX4Q96A99 478 aa13.38□□□□□ -0.27
MAP1LC3B-208ENST00000570189 RAX2Q96IS3 184 aa13.38□□□□□ -0.27
MAP1LC3B-208ENST00000570189 TOLLIPQ9H0E2 274 aa13.38□□□□□ -0.27
MAP1LC3B-208ENST00000570189 C12orf4Q9NQ89 552 aa13.38□□□□□ -0.27
MAP1LC3B-208ENST00000570189 AK3Q9UIJ7 227 aa13.38□□□□□ -0.27
MAP1LC3B-208ENST00000570189 TRAV1-2A0A0B4J238 106 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 ERICH4A6NGS2 130 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 K7EIL1 84 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 GALP22466 123 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 CALRP27797 417 aaKnown RBP13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 OR3A3P47888 321 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 CRIP2P52943 208 aaPredicted RBP13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 KRTAP10-11P60412 298 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 HLA-DRB3P79483 266 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 C5orf64Q2M2E5 130 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 IZUMO2Q6UXV1 221 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 OR56B1Q8NGI3 324 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 C4orf3Q8WVX3 66 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 EDARADDQ8WWZ3 215 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 DPF1Q92782 380 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 FAM3DQ96BQ1 224 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 KCTD7Q96MP8 289 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 RNF5Q99942 180 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 CHMP1AQ9HD42 196 aaPredicted RBP13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 Q9N2K0 584 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 ZMAT5Q9UDW3 170 aaKnown RBP13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 RAB26Q9ULW5 256 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 AK6Q9Y3D8 172 aaKnown RBP13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 V9GY05 133 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 COL7A1Q02388 2944 aa13.37□□□□□ -0.27
MAP1LC3B-208ENST00000570189 CCL24O00175 119 aa13.36□□□□□ -0.27
MAP1LC3B-208ENST00000570189 MRPS14O60783 128 aaKnown RBP13.36□□□□□ -0.27
MAP1LC3B-208ENST00000570189 RBBP9O75884 186 aa13.36□□□□□ -0.27
MAP1LC3B-208ENST00000570189 DIRAS3O95661 229 aa13.36□□□□□ -0.27
MAP1LC3B-208ENST00000570189 IGLV1-40P01703 118 aa13.36□□□□□ -0.27
MAP1LC3B-208ENST00000570189 ZBTB25P24278 435 aa13.36□□□□□ -0.27
MAP1LC3B-208ENST00000570189 MC5RP33032 325 aa13.36□□□□□ -0.27
MAP1LC3B-208ENST00000570189 FHL3Q13643 280 aa13.36□□□□□ -0.27
MAP1LC3B-208ENST00000570189 P2RY14Q15391 338 aa13.36□□□□□ -0.27
MAP1LC3B-208ENST00000570189 IL1F10Q8WWZ1 152 aa13.36□□□□□ -0.27
MAP1LC3B-208ENST00000570189 RITA1Q96K30 269 aa13.36□□□□□ -0.27
MAP1LC3B-208ENST00000570189 CCDC90BQ9GZT6 254 aa13.36□□□□□ -0.27
MAP1LC3B-208ENST00000570189 OR51J1Q9H342 316 aa13.36□□□□□ -0.27
MAP1LC3B-208ENST00000570189 NDUFB11Q9NX14 153 aa13.36□□□□□ -0.27
MAP1LC3B-208ENST00000570189 IGHV7-81A0A0B4J1V7 117 aa13.35□□□□□ -0.27
MAP1LC3B-208ENST00000570189 ST8SIA5O15466 376 aa13.35□□□□□ -0.27
MAP1LC3B-208ENST00000570189 CT45A6P0DMU7 189 aa13.35□□□□□ -0.27
MAP1LC3B-208ENST00000570189 CT45A5P0DMU8 189 aa13.35□□□□□ -0.27
MAP1LC3B-208ENST00000570189 CT45A7P0DMV0 189 aa13.35□□□□□ -0.27
MAP1LC3B-208ENST00000570189 MAP2K4P45985 399 aa13.35□□□□□ -0.27
MAP1LC3B-208ENST00000570189 GABARAPL2P60520 117 aa13.35□□□□□ -0.27
MAP1LC3B-208ENST00000570189 RUNX1Q01196 453 aa13.35□□□□□ -0.27
MAP1LC3B-208ENST00000570189 SSX1Q16384 188 aa13.35□□□□□ -0.27
MAP1LC3B-208ENST00000570189 C2orf76Q3KRA6 126 aa13.35□□□□□ -0.27
MAP1LC3B-208ENST00000570189 C19orf54Q5BKX5 351 aa13.35□□□□□ -0.27
MAP1LC3B-208ENST00000570189 MINDY2Q8NBR6 621 aa13.35□□□□□ -0.27
MAP1LC3B-208ENST00000570189 OR5AN1Q8NGI8 311 aa13.35□□□□□ -0.27
MAP1LC3B-208ENST00000570189 UBE2E2Q96LR5 201 aa13.35□□□□□ -0.27
MAP1LC3B-208ENST00000570189 PECRQ9BY49 303 aa13.35□□□□□ -0.27
MAP1LC3B-208ENST00000570189 RAB22AQ9UL26 194 aa13.35□□□□□ -0.27
MAP1LC3B-208ENST00000570189 DENRO43583 198 aaKnown RBP13.34□□□□□ -0.27
MAP1LC3B-208ENST00000570189 SLC2A2P11168 524 aaPredicted RBP13.34□□□□□ -0.27
MAP1LC3B-208ENST00000570189 CNTFRP26992 372 aa13.34□□□□□ -0.27
MAP1LC3B-208ENST00000570189 VEGFCP49767 419 aa13.34□□□□□ -0.27
MAP1LC3B-208ENST00000570189 DCTN2Q13561 401 aaKnown RBP13.34□□□□□ -0.27
MAP1LC3B-208ENST00000570189 KIAA0141Q14154 515 aaPredicted RBP13.34□□□□□ -0.27
MAP1LC3B-208ENST00000570189 PLAC9Q5JTB6 97 aa13.34□□□□□ -0.27
MAP1LC3B-208ENST00000570189 LIN54Q6MZP7 749 aa13.34□□□□□ -0.27
MAP1LC3B-208ENST00000570189 ARHGAP5-AS1Q96IT6 56 aa13.34□□□□□ -0.27
MAP1LC3B-208ENST00000570189 HDHD3Q9BSH5 251 aaPredicted RBP13.34□□□□□ -0.27
MAP1LC3B-208ENST00000570189 KIAA1456Q9P272 454 aa13.34□□□□□ -0.27
MAP1LC3B-208ENST00000570189 TMEM272A0A1B0GTI8 110 aa13.33□□□□□ -0.28
MAP1LC3B-208ENST00000570189 TRDV1A0A1B0GX56 115 aa13.33□□□□□ -0.28
MAP1LC3B-208ENST00000570189 H0YJW9 148 aa13.33□□□□□ -0.28
MAP1LC3B-208ENST00000570189 PDCD5O14737 125 aa13.33□□□□□ -0.28
MAP1LC3B-208ENST00000570189 ATP6V0E1O15342 81 aa13.33□□□□□ -0.28
MAP1LC3B-208ENST00000570189 SERPINB10P48595 397 aa13.33□□□□□ -0.28
MAP1LC3B-208ENST00000570189 RPL39P5Q59GN2 51 aa13.33□□□□□ -0.28
MAP1LC3B-208ENST00000570189 ZNF660Q6AZW8 331 aaPredicted RBP13.33□□□□□ -0.28
MAP1LC3B-208ENST00000570189 FAM131AQ6UXB0 335 aa13.33□□□□□ -0.28
MAP1LC3B-208ENST00000570189 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.33□□□□□ -0.28
MAP1LC3B-208ENST00000570189 RBMXL1Q96E39 390 aaKnown RBP13.33□□□□□ -0.28
MAP1LC3B-208ENST00000570189 CMSS1Q9BQ75 279 aaKnown RBP13.33□□□□□ -0.28
MAP1LC3B-208ENST00000570189 PARP12Q9H0J9 701 aaKnown RBP13.33□□□□□ -0.28
MAP1LC3B-208ENST00000570189 C11orf54Q9H0W9 315 aaPredicted RBP13.33□□□□□ -0.28
MAP1LC3B-208ENST00000570189 KCNK7Q9Y2U2 307 aa13.33□□□□□ -0.28
MAP1LC3B-208ENST00000570189 WASHC3Q9Y3C0 194 aa13.33□□□□□ -0.28
MAP1LC3B-208ENST00000570189 IGKV1-6A0A0C4DH72 117 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 WI2-2373I1.2A0A1W2PRP0 233 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 IFITM5A6NNB3 132 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 TRDCB7Z8K6 153 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 I3L521 148 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 RRHO14718 337 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 PROP1O75360 226 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 RAB6AP20340 208 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 CEACAM6P40199 344 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 CLDN12P56749 244 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 LCNL1Q6ZST4 164 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms