RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 PIN1P1O15428 100 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 IGHMP01871 453 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 CYBAP13498 195 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 TSPAN7P41732 249 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 CCL28Q9NRJ3 127 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 hADV38S2A0JD32 116 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 PGPEP1LA6NFU8 196 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 TMEM202A6NGA9 273 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 SPINK4O60575 86 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 TNFRSF1AP19438 455 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 CAPZBP47756 277 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 ERVK11-1P61568 191 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 ACTL10Q5JWF8 245 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 LY6G6FQ5SQ64 297 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 ZNF793Q6ZN11 406 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 OR2Z1Q8NG97 314 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 DYNLRB1Q9NP97 96 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 IL36GQ9NZH8 169 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 TMEM56-RWDD3S4R434 201 aa6.18□□□□□ -1.42
CNOT1-216ENST00000569240 MYH14Q7Z406 1995 aaKnown RBP6.18□□□□□ -1.42
CNOT1-216ENST00000569240 ENSAO43768 121 aaKnown RBP6.17□□□□□ -1.42
CNOT1-216ENST00000569240 CCL20P78556 96 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 Q0VG73 95 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 SRSF7Q16629 238 aaKnown RBP eCLIP6.17□□□□□ -1.426e-6■□□□□ 11.2
CNOT1-216ENST00000569240 ZNF658BQ4V348 819 aaPredicted RBP6.17□□□□□ -1.42
CNOT1-216ENST00000569240 S100A7L2Q5SY68 101 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 KLHDC9Q8NEP7 349 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 ARPC1AQ92747 370 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 FER1L6-AS2Q96M78 137 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 RPRMQ9NS64 109 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 MRPS18BQ9Y676 258 aaKnown RBP6.17□□□□□ -1.42
CNOT1-216ENST00000569240 SPRY1O43609 319 aaPredicted RBP6.17□□□□□ -1.42
CNOT1-216ENST00000569240 FCGR3BO75015 233 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 TSPAN13O95857 204 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 CD160O95971 181 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 CSN3P07498 182 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 CD38P28907 300 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 UQCRFS1P47985 274 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 ADIPOQQ15848 244 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 ACSM6Q6P461 480 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 DEFB118Q96PH6 123 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 UCP2P55851 309 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 SMAD4Q13485 552 aaKnown RBP6.17□□□□□ -1.42
CNOT1-216ENST00000569240 OR52E5Q8NH55 327 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 LINC00597Q9H2U6 94 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 GLRX2Q9NS18 164 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 FGF21Q9NSA1 209 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 KLF13Q9Y2Y9 288 aaPredicted RBP6.17□□□□□ -1.42
CNOT1-216ENST00000569240 TNFSF14O43557 240 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 GNG7O60262 68 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 HYPMO75409 117 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 SCRG1O75711 98 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 SGK494Q96LW2 274 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 VSTM2LQ96N03 204 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 FAM90A9PA6NNJ1 464 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 SERF1AO75920 110 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 CYB561P49447 251 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 FGF12P61328 243 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 FOXF1Q12946 379 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 ATP6V0BQ99437 205 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 TMEM189A5PLL7 270 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 MS4A18H0YCH9 400 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 OR2J3O76001 311 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 GZMBP10144 247 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 CFPP27918 469 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 RPS4XP62701 263 aaKnown RBP6.17□□□□□ -1.42
CNOT1-216ENST00000569240 IZUMO4Q1ZYL8 232 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 MS4A18Q3C1V0 323 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 Q5PR19 223 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 LDLRAD1Q5T700 205 aa6.17□□□□□ -1.42
CNOT1-216ENST00000569240 GCHFRP30047 84 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 CKS2P33552 79 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 LGALS4P56470 323 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 SSBP2P81877 361 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-216ENST00000569240 C1orf61Q13536 156 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 EDDM3AQ14507 147 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 CEACAM16Q2WEN9 425 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 GAB4Q2WGN9 574 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 C1QL3Q5VWW1 255 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 GPBAR1Q8TDU6 330 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 GPR146Q96CH1 333 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 MRPL16Q9NX20 251 aaKnown RBP6.16□□□□□ -1.42
CNOT1-216ENST00000569240 PKD1L3Q7Z443 1732 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 RGPD5Q99666 1765 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 H3BUT2 72 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 C1QL1O75973 258 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 ZGLP1P0C6A0 271 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 RUNX1Q01196 453 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 LILRA3Q8N6C8 439 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-216ENST00000569240 TIMD4Q96H15 378 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 RNF126Q9BV68 326 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 APOMO95445 188 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 TMIGD3P0DMS9 266 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-216ENST00000569240 RPS27P42677 84 aaKnown RBP6.16□□□□□ -1.42
CNOT1-216ENST00000569240 C10orf111Q8N326 155 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 CST9LQ9H4G1 147 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 ABCA3Q99758 1704 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 TSPAN2O60636 221 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 TDGF1P13385 188 aa6.16□□□□□ -1.42
CNOT1-216ENST00000569240 ABHD3Q8WU67 409 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms