RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 PSORS1C1Q9UIG5 152 aa11.34□□□□□ -0.59
USB1-214ENST00000568848 PEX16Q9Y5Y5 336 aa11.34□□□□□ -0.59
USB1-214ENST00000568848 KMT2AQ03164 3969 aa11.34□□□□□ -0.59
USB1-214ENST00000568848 EFCAB10A6NFE3 127 aa11.33□□□□□ -0.6
USB1-214ENST00000568848 HSPA12AO43301 675 aa11.33□□□□□ -0.6
USB1-214ENST00000568848 NDUFA3O95167 84 aa11.33□□□□□ -0.6
USB1-214ENST00000568848 TRBV12-3P01733 135 aa11.33□□□□□ -0.6
USB1-214ENST00000568848 CD2P06729 351 aa11.33□□□□□ -0.6
USB1-214ENST00000568848 RPS11P62280 158 aaKnown RBP eCLIP11.33□□□□□ -0.6
USB1-214ENST00000568848 MED21Q13503 144 aa11.33□□□□□ -0.6
USB1-214ENST00000568848 MPV17LQ2QL34 196 aa11.33□□□□□ -0.6
USB1-214ENST00000568848 IL34Q6ZMJ4 242 aa11.33□□□□□ -0.6
USB1-214ENST00000568848 ZNF833PQ6ZTB9 187 aa11.33□□□□□ -0.6
USB1-214ENST00000568848 PPP1R27Q86WC6 154 aa11.33□□□□□ -0.6
USB1-214ENST00000568848 STX19Q8N4C7 294 aa11.33□□□□□ -0.6
USB1-214ENST00000568848 NPBQ8NG41 125 aa11.33□□□□□ -0.6
USB1-214ENST00000568848 MRPL30Q8TCC3 161 aaKnown RBP11.33□□□□□ -0.6
USB1-214ENST00000568848 FBLIM1Q8WUP2 373 aa11.33□□□□□ -0.6
USB1-214ENST00000568848 NRG4Q8WWG1 115 aa11.33□□□□□ -0.6
USB1-214ENST00000568848 FAM46BQ96A09 425 aa11.33□□□□□ -0.6
USB1-214ENST00000568848 IFI27L2Q9H2X8 130 aa11.33□□□□□ -0.6
USB1-214ENST00000568848 PLEKHA3Q9HB20 300 aa11.33□□□□□ -0.6
USB1-214ENST00000568848 NUBP2Q9Y5Y2 271 aa11.33□□□□□ -0.6
USB1-214ENST00000568848 TRBV5-5A0A0J9YX44 114 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 MCRIP1C9JLW8 97 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 JTBO76095 146 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 BRI3O95415 125 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 MAS1P04201 325 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 GTF2F2P13984 249 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 BDKRB2P30411 391 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 PPP3R1P63098 170 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 PLGLAQ15195 96 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 ACTBL2Q562R1 376 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 C6orf183Q5T699 404 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 GLIPR1L1Q6UWM5 242 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 LYPD6Q86Y78 171 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 MRPS24Q96EL2 167 aaKnown RBP11.32□□□□□ -0.6
USB1-214ENST00000568848 RHOVQ96L33 236 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 PGLYRP3Q96LB9 341 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 S100A13Q99584 98 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 THAP7Q9BT49 309 aaPredicted RBP11.32□□□□□ -0.6
USB1-214ENST00000568848 SELENOIQ9C0D9 397 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 KCNK15Q9H427 330 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 TMEM138Q9NPI0 162 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 PLCXD1Q9NUJ7 323 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 CNOT2Q9NZN8 540 aaKnown RBP11.32□□□□□ -0.6
USB1-214ENST00000568848 STUB1Q9UNE7 303 aa11.32□□□□□ -0.6
USB1-214ENST00000568848 MRPS28Q9Y2Q9 187 aaKnown RBP11.32□□□□□ -0.6
USB1-214ENST00000568848 RRHO14718 337 aa11.31□□□□□ -0.6
USB1-214ENST00000568848 CA2P00918 260 aa11.31□□□□□ -0.6
USB1-214ENST00000568848 TRGV3P03979 118 aa11.31□□□□□ -0.6
USB1-214ENST00000568848 CT45A6P0DMU7 189 aa11.31□□□□□ -0.6
USB1-214ENST00000568848 CT45A5P0DMU8 189 aa11.31□□□□□ -0.6
USB1-214ENST00000568848 CT45A7P0DMV0 189 aa11.31□□□□□ -0.6
USB1-214ENST00000568848 IGFBP3P17936 291 aaPredicted RBP11.31□□□□□ -0.6
USB1-214ENST00000568848 EDN2P20800 178 aa11.31□□□□□ -0.6
USB1-214ENST00000568848 SYNJ2BPP57105 145 aa11.31□□□□□ -0.6
USB1-214ENST00000568848 DYRK1AQ13627 763 aa11.31□□□□□ -0.6
USB1-214ENST00000568848 Q3ZCU0 254 aa11.31□□□□□ -0.6
USB1-214ENST00000568848 GAPTQ8N292 157 aa11.31□□□□□ -0.6
USB1-214ENST00000568848 DRAXINQ8NBI3 349 aaPredicted RBP11.31□□□□□ -0.6
USB1-214ENST00000568848 OR5T1Q8NG75 326 aa11.31□□□□□ -0.6
USB1-214ENST00000568848 GRPEL2Q8TAA5 225 aa11.31□□□□□ -0.6
USB1-214ENST00000568848 CPNE2Q96FN4 548 aaPredicted RBP11.31□□□□□ -0.6
USB1-214ENST00000568848 ABHD14BQ96IU4 210 aa11.31□□□□□ -0.6
USB1-214ENST00000568848 ZNF355PQ9NSJ1 428 aa11.31□□□□□ -0.6
USB1-214ENST00000568848 A8MZ25 164 aa11.3□□□□□ -0.6
USB1-214ENST00000568848 ARPC1BO15143 372 aaKnown RBP11.3□□□□□ -0.6
USB1-214ENST00000568848 RBMXL2O75526 392 aaKnown RBP11.3□□□□□ -0.6
USB1-214ENST00000568848 APELAP0DMC3 54 aa11.3□□□□□ -0.6
USB1-214ENST00000568848 CELP19835 753 aa11.3□□□□□ -0.6
USB1-214ENST00000568848 CRIP2P52943 208 aaPredicted RBP11.3□□□□□ -0.6
USB1-214ENST00000568848 RIPK1Q13546 671 aa11.3□□□□□ -0.6
USB1-214ENST00000568848 Q499Y3 187 aa11.3□□□□□ -0.6
USB1-214ENST00000568848 LINC00596Q86U02 117 aa11.3□□□□□ -0.6
USB1-214ENST00000568848 JAGN1Q8N5M9 183 aa11.3□□□□□ -0.6
USB1-214ENST00000568848 NANOGP1Q8N7R0 232 aa11.3□□□□□ -0.6
USB1-214ENST00000568848 IL1F10Q8WWZ1 152 aa11.3□□□□□ -0.6
USB1-214ENST00000568848 OR14A2Q96R54 314 aa11.3□□□□□ -0.6
USB1-214ENST00000568848 CST11Q9H112 138 aa11.3□□□□□ -0.6
USB1-214ENST00000568848 VCXQ9H320 206 aa11.3□□□□□ -0.6
USB1-214ENST00000568848 TUBA4BQ9H853 241 aa11.3□□□□□ -0.6
USB1-214ENST00000568848 FKBP14Q9NWM8 211 aa11.3□□□□□ -0.6
USB1-214ENST00000568848 TRBV5-7A0A0A0MS05 114 aa11.29□□□□□ -0.6
USB1-214ENST00000568848 ERICH4A6NGS2 130 aa11.29□□□□□ -0.6
USB1-214ENST00000568848 PTGES3LE9PB15 166 aa11.29□□□□□ -0.6
USB1-214ENST00000568848 MYL12BO14950 172 aa11.29□□□□□ -0.6
USB1-214ENST00000568848 AQP4P55087 323 aa11.29□□□□□ -0.6
USB1-214ENST00000568848 WNT4P56705 351 aa11.29□□□□□ -0.6
USB1-214ENST00000568848 SSBP2P81877 361 aaPredicted RBP11.29□□□□□ -0.6
USB1-214ENST00000568848 YIF1BQ5BJH7 314 aa11.29□□□□□ -0.6
USB1-214ENST00000568848 C6orf141Q5SZD1 244 aa11.29□□□□□ -0.6
USB1-214ENST00000568848 ZNF660Q6AZW8 331 aaPredicted RBP11.29□□□□□ -0.6
USB1-214ENST00000568848 AWAT2Q6E213 333 aa11.29□□□□□ -0.6
USB1-214ENST00000568848 OR10K2Q6IF99 312 aa11.29□□□□□ -0.6
USB1-214ENST00000568848 FLYWCH2Q96CP2 140 aaKnown RBP11.29□□□□□ -0.6
USB1-214ENST00000568848 SULT4A1Q9BR01 284 aa11.29□□□□□ -0.6
USB1-214ENST00000568848 ELOVL1Q9BW60 279 aa11.29□□□□□ -0.6
USB1-214ENST00000568848 HIPK2Q9H2X6 1198 aa11.29□□□□□ -0.6
USB1-214ENST00000568848 MBNL3Q9NUK0 354 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms