RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 Q9N2K0 584 aa10.29□□□□□ -0.76
TSC2-220ENST00000568238 RAB9BQ9NP90 201 aa10.29□□□□□ -0.76
TSC2-220ENST00000568238 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.29□□□□□ -0.76
TSC2-220ENST00000568238 NDUFA13Q9P0J0 144 aa10.29□□□□□ -0.76
TSC2-220ENST00000568238 GNG12Q9UBI6 72 aa10.29□□□□□ -0.76
TSC2-220ENST00000568238 ZNF230Q9UIE0 474 aaPredicted RBP10.29□□□□□ -0.76
TSC2-220ENST00000568238 AMMECR1Q9Y4X0 333 aaPredicted RBP10.29□□□□□ -0.76
TSC2-220ENST00000568238 ADARB2-AS1A8MUL3 147 aa10.28□□□□□ -0.76
TSC2-220ENST00000568238 OOSP1A8MZH6 123 aa10.28□□□□□ -0.76
TSC2-220ENST00000568238 LY6LH3BQJ8 138 aa10.28□□□□□ -0.76
TSC2-220ENST00000568238 SSX5O60225 188 aa10.28□□□□□ -0.76
TSC2-220ENST00000568238 GNMTQ14749 295 aa10.28□□□□□ -0.76
TSC2-220ENST00000568238 PNLIPRP3Q17RR3 467 aa10.28□□□□□ -0.76
TSC2-220ENST00000568238 FBLN7Q53RD9 439 aa10.28□□□□□ -0.76
TSC2-220ENST00000568238 KPRPQ5T749 579 aaPredicted RBP10.28□□□□□ -0.76
TSC2-220ENST00000568238 OR10A7Q8NGE5 316 aa10.28□□□□□ -0.76
TSC2-220ENST00000568238 OR52L2PQ8NGH6 319 aa10.28□□□□□ -0.76
TSC2-220ENST00000568238 TOMM40LQ969M1 308 aa10.28□□□□□ -0.76
TSC2-220ENST00000568238 RPEQ96AT9 228 aa10.28□□□□□ -0.76
TSC2-220ENST00000568238 DGCR14Q96DF8 476 aaKnown RBP10.28□□□□□ -0.76
TSC2-220ENST00000568238 CMTM3Q96MX0 182 aa10.28□□□□□ -0.76
TSC2-220ENST00000568238 RBM14Q96PK6 669 aaKnown RBP10.28□□□□□ -0.76
TSC2-220ENST00000568238 ST6GALNAC5Q9BVH7 336 aa10.28□□□□□ -0.76
TSC2-220ENST00000568238 MIXL1Q9H2W2 232 aa10.28□□□□□ -0.76
TSC2-220ENST00000568238 GFOD1Q9NXC2 390 aa10.28□□□□□ -0.76
TSC2-220ENST00000568238 EXTL2Q9UBQ6 330 aa10.28□□□□□ -0.76
TSC2-220ENST00000568238 MRPS7Q9Y2R9 242 aaKnown RBP10.28□□□□□ -0.76
TSC2-220ENST00000568238 A0A1W2PPE3 182 aa10.27□□□□□ -0.77
TSC2-220ENST00000568238 MEIS3P1A6NDR6 274 aa10.27□□□□□ -0.77
TSC2-220ENST00000568238 TRDCB7Z8K6 153 aa10.27□□□□□ -0.77
TSC2-220ENST00000568238 FCER2P06734 321 aa10.27□□□□□ -0.77
TSC2-220ENST00000568238 SCTP09683 121 aa10.27□□□□□ -0.77
TSC2-220ENST00000568238 DTYMKP23919 212 aa10.27□□□□□ -0.77
TSC2-220ENST00000568238 PPP1CCP36873 323 aaKnown RBP10.27□□□□□ -0.77
TSC2-220ENST00000568238 LOXL3P58215 753 aa10.27□□□□□ -0.77
TSC2-220ENST00000568238 ABCA11PQ4W5N1 156 aa10.27□□□□□ -0.77
TSC2-220ENST00000568238 CNIH2Q6PI25 160 aa10.27□□□□□ -0.77
TSC2-220ENST00000568238 ZNF554Q86TJ5 538 aa10.27□□□□□ -0.77
TSC2-220ENST00000568238 SNX29P2Q8IUI4 249 aa10.27□□□□□ -0.77
TSC2-220ENST00000568238 OR5AU1Q8NGC0 362 aa10.27□□□□□ -0.77
TSC2-220ENST00000568238 GALMQ96C23 342 aa10.27□□□□□ -0.77
TSC2-220ENST00000568238 OR2S2Q9NQN1 319 aa10.27□□□□□ -0.77
TSC2-220ENST00000568238 ADAM30Q9UKF2 790 aa10.27□□□□□ -0.77
TSC2-220ENST00000568238 MGAT4AQ9UM21 535 aa10.27□□□□□ -0.77
TSC2-220ENST00000568238 PSG11Q9UQ72 335 aa10.27□□□□□ -0.77
TSC2-220ENST00000568238 A0A1W2PRX2 142 aa10.26□□□□□ -0.77
TSC2-220ENST00000568238 J3QR06 171 aa10.26□□□□□ -0.77
TSC2-220ENST00000568238 M0QZK8 103 aa10.26□□□□□ -0.77
TSC2-220ENST00000568238 FABP7O15540 132 aa10.26□□□□□ -0.77
TSC2-220ENST00000568238 LPLP06858 475 aa10.26□□□□□ -0.77
TSC2-220ENST00000568238 FAM106CPP0CH98 169 aa10.26□□□□□ -0.77
TSC2-220ENST00000568238 PITPNAQ00169 270 aa10.26□□□□□ -0.77
TSC2-220ENST00000568238 TMEM30BQ3MIR4 351 aa10.26□□□□□ -0.77
TSC2-220ENST00000568238 OR52M1Q8NGK5 317 aa10.26□□□□□ -0.77
TSC2-220ENST00000568238 OR56B4Q8NH76 319 aa10.26□□□□□ -0.77
TSC2-220ENST00000568238 NXF2Q9GZY0 626 aaKnown RBP10.26□□□□□ -0.77
TSC2-220ENST00000568238 OR1A1Q9P1Q5 309 aa10.26□□□□□ -0.77
TSC2-220ENST00000568238 JPT1Q9UK76 154 aa10.26□□□□□ -0.77
TSC2-220ENST00000568238 MOB4Q9Y3A3 225 aa10.26□□□□□ -0.77
TSC2-220ENST00000568238 IGKV1D-8A0A087WSZ0 117 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 IGKV1-6A0A0C4DH72 117 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 SH2D7A6NKC9 451 aaPredicted RBP10.25□□□□□ -0.77
TSC2-220ENST00000568238 BET1O15155 118 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 SLC31A2O15432 143 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 HSPA12AO43301 675 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 AMY1AP04745 511 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 AMY2AP04746 511 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 GSTT2P0CG29 244 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 GSTT2BP0CG30 244 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 PF4V1P10720 104 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 HTD2P86397 168 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 CD83Q01151 205 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 KIR2DS1Q14954 304 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 RNASE12Q5GAN4 147 aaKnown RBP10.25□□□□□ -0.77
TSC2-220ENST00000568238 STEAP3Q658P3 488 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 CENPVQ7Z7K6 275 aaPredicted RBP10.25□□□□□ -0.77
TSC2-220ENST00000568238 GVQW1Q8N7I0 195 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 OR4X2Q8NGF9 303 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 OR4A4PQ8NGN8 299 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 OR10X1Q8NGY0 326 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 SLC23A1Q9UHI7 598 aa10.25□□□□□ -0.77
TSC2-220ENST00000568238 A0A1W2PPI3 338 aa10.24□□□□□ -0.77
TSC2-220ENST00000568238 TCRBV4S1A1TA0A5B7 111 aa10.24□□□□□ -0.77
TSC2-220ENST00000568238 A6NHS1 94 aa10.24□□□□□ -0.77
TSC2-220ENST00000568238 HLA-DQB1P01920 261 aa10.24□□□□□ -0.77
TSC2-220ENST00000568238 SNRNP70P08621 437 aaKnown RBP10.24□□□□□ -0.77
TSC2-220ENST00000568238 PRSS3P35030 304 aa10.24□□□□□ -0.77
TSC2-220ENST00000568238 RAB7AP51149 207 aa10.24□□□□□ -0.77
TSC2-220ENST00000568238 OXLD1Q5BKU9 147 aa10.24□□□□□ -0.77
TSC2-220ENST00000568238 IGSF11Q5DX21 431 aa10.24□□□□□ -0.77
TSC2-220ENST00000568238 C9orf152Q5JTZ5 239 aa10.24□□□□□ -0.77
TSC2-220ENST00000568238 REC114Q7Z4M0 266 aa10.24□□□□□ -0.77
TSC2-220ENST00000568238 THNSL2Q86YJ6 484 aa10.24□□□□□ -0.77
TSC2-220ENST00000568238 OR8H3Q8N146 312 aa10.24□□□□□ -0.77
TSC2-220ENST00000568238 DRAM1Q8N682 238 aa10.24□□□□□ -0.77
TSC2-220ENST00000568238 DIRAS2Q96HU8 199 aa10.24□□□□□ -0.77
TSC2-220ENST00000568238 PARP12Q9H0J9 701 aaKnown RBP10.24□□□□□ -0.77
TSC2-220ENST00000568238 IFT46Q9NQC8 304 aa10.24□□□□□ -0.77
TSC2-220ENST00000568238 TSSC4Q9Y5U2 329 aaPredicted RBP10.24□□□□□ -0.77
TSC2-220ENST00000568238 FAM90A9PA6NNJ1 464 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms