RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 C4orf3Q8WVX3 66 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 MRPS24Q96EL2 167 aaKnown RBP7.54□□□□□ -1.2
CAPN3-216ENST00000567071 ARHGAP5-AS1Q96IT6 56 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 CMTM3Q96MX0 182 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 FAM110AQ9BQ89 295 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 DIABLOQ9NR28 239 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 NLKQ9UBE8 527 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 V9GYH0 126 aa7.54□□□□□ -1.2
CAPN3-216ENST00000567071 TMEM235A6NFC5 223 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 FABP12A6NFH5 140 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 RFPL4AA6NLU0 287 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 OR2AT4A6NND4 320 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 FOXI3A8MTJ6 420 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-216ENST00000567071 RFPL4AL1F8VTS6 287 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 OVOL1O14753 267 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 XRCC3O43542 346 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 HAND1O96004 215 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 AMY1AP04745 511 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 AMY2AP04746 511 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 PSG2P11465 335 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 GNB3P16520 340 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 CCL3L1P16619 93 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 TAS2R20P59543 309 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 IL13RA2Q14627 380 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 ZNF79Q15937 498 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 MPV17LQ2QL34 196 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 NHLRC3Q5JS37 347 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 PLAC9Q5JTB6 97 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 SPIN3Q5JUX0 258 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 RAB12Q6IQ22 244 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 C6orf201Q7Z4U5 140 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 FAM89BQ8N5H3 189 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 OR11H1Q8NG94 326 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 NEK7Q8TDX7 302 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 RAB3CQ96E17 227 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 GON7Q9BXV9 100 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 HIPK2Q9H2X6 1198 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 RHOFQ9HBH0 211 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 RETNQ9HD89 108 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 RASL12Q9NYN1 266 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 MOB4Q9Y3A3 225 aa7.53□□□□□ -1.2
CAPN3-216ENST00000567071 IGKV1D-17A0A075B6S4 117 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 A0A0A6YYH2 397 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 TRAV24A0A0B4J272 114 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 A6NJ64 397 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 J3QRK9 145 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 MFNGO00587 321 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 DEGS1O15121 323 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 PDCD6O75340 191 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 SCGNO76038 276 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 OR2H2O95918 312 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 HIST1H1DP16402 221 aaKnown RBP7.52□□□□□ -1.21
CAPN3-216ENST00000567071 ETV6P41212 452 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 MNDAP41218 407 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 TMEM50BP56557 158 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 ZNF846Q147U1 533 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 ZNF146Q15072 292 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 PNLIPRP3Q17RR3 467 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 PYDC2Q56P42 97 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 PAN3Q58A45 887 aaKnown RBP7.52□□□□□ -1.21
CAPN3-216ENST00000567071 LDLRAD2Q5SZI1 272 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 Q6P435 159 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 ACSM6Q6P461 480 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 CEMP1Q6PRD7 247 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-216ENST00000567071 BAIAP2L2Q6UXY1 529 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 LINC00299Q6ZSB3 139 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 SLC35E3Q7Z769 313 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 LINC00596Q86U02 117 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 CD177Q8N6Q3 437 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 ASCC1Q8N9N2 400 aaKnown RBP7.52□□□□□ -1.21
CAPN3-216ENST00000567071 NUDCD2Q8WVJ2 157 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 S100ZQ8WXG8 99 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 NEDD4LQ96PU5 975 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 SULT4A1Q9BR01 284 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 PECRQ9BY49 303 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 CHST6Q9GZX3 395 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 AUNIPQ9H7T9 357 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 ING3Q9NXR8 418 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 GLS2Q9UI32 602 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 LINC00527Q9UJ94 153 aa7.52□□□□□ -1.21
CAPN3-216ENST00000567071 ELF5Q9UKW6 265 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-216ENST00000567071 TMEM82A0PJX8 343 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 UBE2QL1A1L167 161 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 MEIS3P1A6NDR6 274 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 FAM90A10PA6NDY2 464 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 FAM90A18PA6NE21 464 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 FAM90A16PA6NEW6 464 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 FAM90A20PA6NIJ5 464 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 FAM90A7PA6NKC0 464 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 FAM90A12PA8MX19 464 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 FAM90A5PA8MXJ8 464 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 FAM90A23PA8MXZ1 464 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 C12orf77C9JDV5 145 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 SLC33A1O00400 549 aaPredicted RBP7.51□□□□□ -1.21
CAPN3-216ENST00000567071 SH2D1BO14796 132 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 HSPA12AO43301 675 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 HLA-DQB1P01920 261 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 RBP4P02753 201 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 FCER2P06734 321 aa7.51□□□□□ -1.21
CAPN3-216ENST00000567071 FAM90A15PP0C7V4 464 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms