RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 INMT-MINDY4F8WBC2 141 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 PEX14O75381 377 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 IGHV4-59P01825 116 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 PMP2P02689 132 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 H2AFB2P0C5Z0 115 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 ZNF735P0CB33 412 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 OR5H8P0DN80 308 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 GZMHP20718 246 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 COX7A1P24310 79 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 MECP2P51608 486 aaKnown RBP10.91□□□□□ -0.66
CLK3-218ENST00000566926 CCR6P51684 374 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 AESQ08117 197 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 AANATQ16613 207 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 TMEM30BQ3MIR4 351 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 DHRS11Q6UWP2 260 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 OR11H6Q8NGC7 330 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 OR4F5Q8NH21 305 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 TERB2Q8NHR7 220 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 CCDC107Q8WV48 283 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 MEGF9Q9H1U4 602 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 SESN1Q9Y6P5 492 aa10.91□□□□□ -0.66
CLK3-218ENST00000566926 ODAMA1E959 279 aa10.9□□□□□ -0.66
CLK3-218ENST00000566926 ARG1P05089 322 aa10.9□□□□□ -0.66
CLK3-218ENST00000566926 GLIPR1P48060 266 aa10.9□□□□□ -0.66
CLK3-218ENST00000566926 HMGN3Q15651 99 aa10.9□□□□□ -0.66
CLK3-218ENST00000566926 SCGB2B2Q4G0G5 96 aa10.9□□□□□ -0.66
CLK3-218ENST00000566926 FAAP20Q6NZ36 180 aa10.9□□□□□ -0.66
CLK3-218ENST00000566926 TCF23Q7RTU1 214 aa10.9□□□□□ -0.66
CLK3-218ENST00000566926 LHFPL1Q86WI0 220 aa10.9□□□□□ -0.66
CLK3-218ENST00000566926 PLPPR1Q8TBJ4 325 aa10.9□□□□□ -0.66
CLK3-218ENST00000566926 GIMAP1Q8WWP7 306 aa10.9□□□□□ -0.66
CLK3-218ENST00000566926 COQ2Q96H96 371 aa10.9□□□□□ -0.66
CLK3-218ENST00000566926 CABLES2Q9BTV7 478 aa10.9□□□□□ -0.66
CLK3-218ENST00000566926 ALX4Q9H161 411 aaPredicted RBP10.9□□□□□ -0.66
CLK3-218ENST00000566926 MMP28Q9H239 520 aa10.9□□□□□ -0.66
CLK3-218ENST00000566926 BEX1Q9HBH7 125 aa10.9□□□□□ -0.66
CLK3-218ENST00000566926 KIF25Q9UIL4 384 aa10.9□□□□□ -0.66
CLK3-218ENST00000566926 VPREB3Q9UKI3 123 aa10.9□□□□□ -0.66
CLK3-218ENST00000566926 MMP24Q9Y5R2 645 aa10.9□□□□□ -0.66
CLK3-218ENST00000566926 DNHD1Q96M86 4753 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 MEX3AA1L020 520 aaKnown RBP10.89□□□□□ -0.67
CLK3-218ENST00000566926 ZNF729A6NN14 1252 aaPredicted RBP10.89□□□□□ -0.67
CLK3-218ENST00000566926 SPINT2O43291 252 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 GPR137BO60478 399 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 NDUFA7O95182 113 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 SPNP16150 400 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 TAS2R31P59538 309 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 UBE2MP61081 183 aaKnown RBP10.89□□□□□ -0.67
CLK3-218ENST00000566926 LRRC75BQ2VPJ9 315 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 MINOS1Q5TGZ0 78 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 ZNF626Q68DY1 528 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 LPCAT3Q6P1A2 487 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 C11orf88Q6PI97 169 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 HEPN1Q6WQI6 88 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 OR10J5Q8NHC4 309 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 MAFIPQ8WZ33 124 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 GALMQ96C23 342 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 MALSU1Q96EH3 234 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 SSX3Q99909 188 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 ZNF747Q9BV97 191 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 CLEC7AQ9BXN2 247 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 TMEM133Q9H2Q1 129 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 GPN1Q9HCN4 374 aaPredicted RBP10.89□□□□□ -0.67
CLK3-218ENST00000566926 MINOS1-NBL1R4GNA1 71 aa10.89□□□□□ -0.67
CLK3-218ENST00000566926 TENM1Q9UKZ4 2725 aa10.88□□□□□ -0.67
CLK3-218ENST00000566926 IGKV1D-8A0A087WSZ0 117 aa10.88□□□□□ -0.67
CLK3-218ENST00000566926 ODF3BA8MYP8 253 aa10.88□□□□□ -0.67
CLK3-218ENST00000566926 H3BUX3 64 aa10.88□□□□□ -0.67
CLK3-218ENST00000566926 IL5P05113 134 aa10.88□□□□□ -0.67
CLK3-218ENST00000566926 GSTT2P0CG29 244 aa10.88□□□□□ -0.67
CLK3-218ENST00000566926 RCC1P18754 421 aaPredicted RBP10.88□□□□□ -0.67
CLK3-218ENST00000566926 UCP3P55916 312 aa10.88□□□□□ -0.67
CLK3-218ENST00000566926 HERV-K104P61576 105 aa10.88□□□□□ -0.67
CLK3-218ENST00000566926 TATDN3Q17R31 274 aa10.88□□□□□ -0.67
CLK3-218ENST00000566926 ZNF660Q6AZW8 331 aaPredicted RBP10.88□□□□□ -0.67
CLK3-218ENST00000566926 DHRS7BQ6IAN0 325 aaPredicted RBP10.88□□□□□ -0.67
CLK3-218ENST00000566926 Q6ZPA2 131 aa10.88□□□□□ -0.67
CLK3-218ENST00000566926 ZNF596Q8TC21 504 aa10.88□□□□□ -0.67
CLK3-218ENST00000566926 ZFAND1Q8TCF1 268 aa10.88□□□□□ -0.67
CLK3-218ENST00000566926 TAF9BQ9HBM6 251 aa10.88□□□□□ -0.67
CLK3-218ENST00000566926 RAB18Q9NP72 206 aa10.88□□□□□ -0.67
CLK3-218ENST00000566926 ING3Q9NXR8 418 aa10.88□□□□□ -0.67
CLK3-218ENST00000566926 C1RLQ9NZP8 487 aa10.88□□□□□ -0.67
CLK3-218ENST00000566926 TRAV6A0A075B6T7 132 aa10.87□□□□□ -0.67
CLK3-218ENST00000566926 TRBV6-7A0A0A0MS04 114 aa10.87□□□□□ -0.67
CLK3-218ENST00000566926 IGHV2-26A0A0B4J1V2 119 aa10.87□□□□□ -0.67
CLK3-218ENST00000566926 C7orf66A4D0T2 115 aa10.87□□□□□ -0.67
CLK3-218ENST00000566926 SDCBPO00560 298 aaPredicted RBP10.87□□□□□ -0.67
CLK3-218ENST00000566926 ZBTB25P24278 435 aa10.87□□□□□ -0.67
CLK3-218ENST00000566926 HTD2P86397 168 aa10.87□□□□□ -0.67
CLK3-218ENST00000566926 SHISA2Q6UWI4 295 aa10.87□□□□□ -0.67
CLK3-218ENST00000566926 LIAT1Q6ZQX7 453 aa10.87□□□□□ -0.67
CLK3-218ENST00000566926 OR13C8Q8NGS7 320 aa10.87□□□□□ -0.67
CLK3-218ENST00000566926 MOB3AQ96BX8 217 aa10.87□□□□□ -0.67
CLK3-218ENST00000566926 ZNF486Q96H40 463 aaPredicted RBP10.87□□□□□ -0.67
CLK3-218ENST00000566926 KIRREL1Q96J84 757 aa10.87□□□□□ -0.67
CLK3-218ENST00000566926 ZNF2Q9BSG1 426 aaPredicted RBP10.87□□□□□ -0.67
CLK3-218ENST00000566926 LINC00574Q9H8X3 128 aa10.87□□□□□ -0.67
CLK3-218ENST00000566926 KBTBD11-OT1A0A1B0GTJ5 212 aa10.86□□□□□ -0.67
CLK3-218ENST00000566926 CLPSL1A2RUU4 121 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms