RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 IMP3Q9NV31 184 aaKnown RBP2.85□□□□□ -1.95
CNOT1-209ENST00000566240 TBL2Q9Y4P3 447 aaKnown RBP2.85□□□□□ -1.95
CNOT1-209ENST00000566240 PLXNB3Q9ULL4 1909 aa2.85□□□□□ -1.95
CNOT1-209ENST00000566240 LOC285556D6RIA3 1793 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 TRIP11Q15643 1979 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 PVALEFA0A1B0GWK0 134 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 IGLL5B9A064 214 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 ADAP1O75689 374 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 EPPINO95925 133 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 ORM1P02763 201 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 ZNF3P17036 446 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 CNTFRP26992 372 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 RCVRNP35243 200 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 ZNF235Q14590 738 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 FAM45BPQ6NSW5 357 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 TMEM144Q7Z5S9 345 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 SGPP2Q8IWX5 399 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 MUC15Q8N387 334 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 DTD1Q8TEA8 209 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 YIPF5Q969M3 257 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 UGT2B28Q9BY64 529 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 VSIRQ9H7M9 311 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 DMAC2Q9NW81 257 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 BTRCQ9Y297 605 aa2.84□□□□□ -1.95
CNOT1-209ENST00000566240 BAZ2BQ9UIF8 2168 aaKnown RBP2.84□□□□□ -1.96
CNOT1-209ENST00000566240 COL11A1P12107 1806 aaPredicted RBP2.84□□□□□ -1.96
CNOT1-209ENST00000566240 PARP14Q460N5 1801 aa2.84□□□□□ -1.96
CNOT1-209ENST00000566240 OTOFQ9HC10 1997 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 FTCDNL1E5RQL4 147 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 F5H5K5 113 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 KLRC4-KLRK1H3BQV0 150 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 LIN7AO14910 233 aaPredicted RBP2.83□□□□□ -1.96
CNOT1-209ENST00000566240 FGF16O43320 207 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 CYTH3O43739 400 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 STX10O60499 249 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 PTHLHP12272 177 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 MLNP12872 115 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 FAM3AP98173 230 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 FAM53BQ14153 422 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 SPA17Q15506 151 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 TMEM69Q5SWH9 247 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 ELP2Q6IA86 826 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 SPINT4Q6UDR6 99 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 SLC13A5Q86YT5 568 aaPredicted RBP2.83□□□□□ -1.96
CNOT1-209ENST00000566240 PLCZ1Q86YW0 608 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 AMN1Q8IY45 258 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 CLDN23Q96B33 292 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 GPR22Q99680 433 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 PRSS27Q9BQR3 290 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 SEC22CQ9BRL7 303 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 TIPINQ9BVW5 301 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 NAGKQ9UJ70 344 aa2.83□□□□□ -1.96
CNOT1-209ENST00000566240 A0A0G2JMZ2 1700 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 PTPRFP10586 1907 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 MYH9P35579 1960 aaKnown RBP2.82□□□□□ -1.96
CNOT1-209ENST00000566240 IGHV3-43A0A0B4J1X8 118 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 TMEM250H0YL14 139 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 K7ERS5 55 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 SLC31A1O15431 190 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 ATP6V1G2O95670 118 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 F8A1P23610 371 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 ACTR1BP42025 376 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 HSPA13P48723 471 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 ENDOGQ14249 297 aaKnown RBP2.82□□□□□ -1.96
CNOT1-209ENST00000566240 EXOC3L4Q17RC7 722 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 KRTAP13-2Q52LG2 175 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 SDHAF4Q5VUM1 108 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 IGFL1Q6UW32 110 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 IGFL3Q6UXB1 125 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 DEFB132Q7Z7B7 95 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 OR5L1Q8NGL2 311 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 OR4P4Q8NGL7 312 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 DDI1Q8WTU0 396 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 SHANK2-AS3Q9BTD1 123 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 PLA2G12AQ9BZM1 189 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 DHCR7Q9UBM7 475 aaKnown RBP2.82□□□□□ -1.96
CNOT1-209ENST00000566240 MARCOQ9UEW3 520 aaPredicted RBP2.82□□□□□ -1.96
CNOT1-209ENST00000566240 SSC5DA1L4H1 1573 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 PAPPA2Q9BXP8 1791 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 SBF1O95248 1867 aa2.82□□□□□ -1.96
CNOT1-209ENST00000566240 PSIP1O75475 530 aaKnown RBP2.81□□□□□ -1.96
CNOT1-209ENST00000566240 FSTL3O95633 263 aa2.81□□□□□ -1.96
CNOT1-209ENST00000566240 PFN1P07737 140 aaKnown RBP2.81□□□□□ -1.96
CNOT1-209ENST00000566240 ZNF14P17017 642 aaPredicted RBP2.81□□□□□ -1.96
CNOT1-209ENST00000566240 S100A2P29034 98 aa2.81□□□□□ -1.96
CNOT1-209ENST00000566240 PAFAH1B3Q15102 231 aaKnown RBP2.81□□□□□ -1.96
CNOT1-209ENST00000566240 KHDRBS2Q5VWX1 349 aaKnown RBP2.81□□□□□ -1.96
CNOT1-209ENST00000566240 TTC33Q6PID6 262 aaPredicted RBP2.81□□□□□ -1.96
CNOT1-209ENST00000566240 FAM19A3Q7Z5A8 133 aa2.81□□□□□ -1.96
CNOT1-209ENST00000566240 ZFP82Q8N141 532 aa2.81□□□□□ -1.96
CNOT1-209ENST00000566240 OR8K1Q8NGG5 319 aa2.81□□□□□ -1.96
CNOT1-209ENST00000566240 SUN5Q8TC36 379 aa2.81□□□□□ -1.96
CNOT1-209ENST00000566240 DNAJB3Q8WWF6 145 aa2.81□□□□□ -1.96
CNOT1-209ENST00000566240 CCDC42Q96M95 316 aa2.81□□□□□ -1.96
CNOT1-209ENST00000566240 DRC3Q9H069 523 aa2.81□□□□□ -1.96
CNOT1-209ENST00000566240 PARVGQ9HBI0 331 aa2.81□□□□□ -1.96
CNOT1-209ENST00000566240 NKIRAS1Q9NYS0 192 aa2.81□□□□□ -1.96
CNOT1-209ENST00000566240 PYCARDQ9ULZ3 195 aa2.81□□□□□ -1.96
CNOT1-209ENST00000566240 PLXNB2O15031 1838 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms