RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 IGKV1-6A0A0C4DH72 117 aa14.95□□□□□ -0.02
SPSB3-207ENST00000565550 WI2-2373I1.2A0A1W2PRP0 233 aa14.95□□□□□ -0.02
SPSB3-207ENST00000565550 GABARAPO95166 117 aa14.95□□□□□ -0.02
SPSB3-207ENST00000565550 FCGR3AP08637 254 aa14.95□□□□□ -0.02
SPSB3-207ENST00000565550 TMEM11P17152 192 aa14.95□□□□□ -0.02
SPSB3-207ENST00000565550 RANBP1P43487 201 aa14.95□□□□□ -0.02
SPSB3-207ENST00000565550 MADCAM1Q13477 382 aa14.95□□□□□ -0.02
SPSB3-207ENST00000565550 CDNFQ49AH0 187 aa14.95□□□□□ -0.02
SPSB3-207ENST00000565550 SLC25A48Q6ZT89 311 aaKnown RBP14.95□□□□□ -0.02
SPSB3-207ENST00000565550 LINC00311Q8N616 119 aa14.95□□□□□ -0.02
SPSB3-207ENST00000565550 C5orf56Q8N8D9 126 aa14.95□□□□□ -0.02
SPSB3-207ENST00000565550 GALMQ96C23 342 aa14.95□□□□□ -0.02
SPSB3-207ENST00000565550 NOL4LQ96MY1 436 aaPredicted RBP14.95□□□□□ -0.02
SPSB3-207ENST00000565550 SCOCQ9UIL1 159 aa14.95□□□□□ -0.02
SPSB3-207ENST00000565550 IGKV1D-8A0A087WSZ0 117 aa14.94□□□□□ -0.02
SPSB3-207ENST00000565550 IGHV3-72A0A0B4J1Y9 119 aa14.94□□□□□ -0.02
SPSB3-207ENST00000565550 TMEM235A6NFC5 223 aa14.94□□□□□ -0.02
SPSB3-207ENST00000565550 HSD17B6O14756 317 aa14.94□□□□□ -0.02
SPSB3-207ENST00000565550 PTHLHP12272 177 aa14.94□□□□□ -0.02
SPSB3-207ENST00000565550 HOXD3P31249 432 aaPredicted RBP14.94□□□□□ -0.02
SPSB3-207ENST00000565550 ARFRP1Q13795 201 aa14.94□□□□□ -0.02
SPSB3-207ENST00000565550 ETV3LQ6ZN32 361 aa14.94□□□□□ -0.02
SPSB3-207ENST00000565550 MOB1BQ7L9L4 216 aa14.94□□□□□ -0.02
SPSB3-207ENST00000565550 GPR141Q7Z602 305 aa14.94□□□□□ -0.02
SPSB3-207ENST00000565550 ZNF554Q86TJ5 538 aa14.94□□□□□ -0.02
SPSB3-207ENST00000565550 MRPL41Q8IXM3 137 aaKnown RBP14.94□□□□□ -0.02
SPSB3-207ENST00000565550 NUDCD2Q8WVJ2 157 aa14.94□□□□□ -0.02
SPSB3-207ENST00000565550 RIMS4Q9H426 269 aaPredicted RBP14.94□□□□□ -0.02
SPSB3-207ENST00000565550 ABRACLQ9P1F3 81 aa14.94□□□□□ -0.02
SPSB3-207ENST00000565550 JPT1Q9UK76 154 aa14.94□□□□□ -0.02
SPSB3-207ENST00000565550 ETV7Q9Y603 341 aa14.94□□□□□ -0.02
SPSB3-207ENST00000565550 ST8SIA5O15466 376 aa14.93□□□□□ -0.02
SPSB3-207ENST00000565550 IGKV1D-33P01593 117 aa14.93□□□□□ -0.02
SPSB3-207ENST00000565550 IGKV1-33P01594 117 aa14.93□□□□□ -0.02
SPSB3-207ENST00000565550 RAB7AP51149 207 aa14.93□□□□□ -0.02
SPSB3-207ENST00000565550 RPL23AP62750 156 aaKnown RBP14.93□□□□□ -0.02
SPSB3-207ENST00000565550 HTD2P86397 168 aa14.93□□□□□ -0.02
SPSB3-207ENST00000565550 EGFEM1PQ0D2K5 195 aa14.93□□□□□ -0.02
SPSB3-207ENST00000565550 ZNF260Q3ZCT1 412 aa14.93□□□□□ -0.02
SPSB3-207ENST00000565550 VAX1Q5SQQ9 334 aa14.93□□□□□ -0.02
SPSB3-207ENST00000565550 C18orf65Q6ZTR6 163 aa14.93□□□□□ -0.02
SPSB3-207ENST00000565550 ODF3L1Q8IXM7 274 aa14.93□□□□□ -0.02
SPSB3-207ENST00000565550 OR8H3Q8N146 312 aa14.93□□□□□ -0.02
SPSB3-207ENST00000565550 ST6GALNAC6Q969X2 333 aa14.93□□□□□ -0.02
SPSB3-207ENST00000565550 SLC25A46Q96AG3 418 aa14.93□□□□□ -0.02
SPSB3-207ENST00000565550 SLC23A1Q9UHI7 598 aa14.93□□□□□ -0.02
SPSB3-207ENST00000565550 LINC00527Q9UJ94 153 aa14.93□□□□□ -0.02
SPSB3-207ENST00000565550 SPATA2Q9UM82 520 aa14.93□□□□□ -0.02
SPSB3-207ENST00000565550 SERPINE3A8MV23 424 aa14.92□□□□□ -0.02
SPSB3-207ENST00000565550 FGF16O43320 207 aa14.92□□□□□ -0.02
SPSB3-207ENST00000565550 SSX5O60225 188 aa14.92□□□□□ -0.02
SPSB3-207ENST00000565550 GSTT2P0CG29 244 aa14.92□□□□□ -0.02
SPSB3-207ENST00000565550 GSTT2BP0CG30 244 aa14.92□□□□□ -0.02
SPSB3-207ENST00000565550 THBS3P49746 956 aa14.92□□□□□ -0.02
SPSB3-207ENST00000565550 IGSF11Q5DX21 431 aa14.92□□□□□ -0.02
SPSB3-207ENST00000565550 C8orf31Q8N9H6 132 aa14.92□□□□□ -0.02
SPSB3-207ENST00000565550 CHPT1Q8WUD6 406 aa14.92□□□□□ -0.02
SPSB3-207ENST00000565550 ABHD14AQ9BUJ0 271 aa14.92□□□□□ -0.02
SPSB3-207ENST00000565550 RAB9BQ9NP90 201 aa14.92□□□□□ -0.02
SPSB3-207ENST00000565550 TRAV18A0A075B6X5 111 aa14.91□□□□□ -0.02
SPSB3-207ENST00000565550 IGHV1-3A0A0C4DH29 117 aa14.91□□□□□ -0.02
SPSB3-207ENST00000565550 ZNF736B4DX44 427 aaPredicted RBP14.91□□□□□ -0.02
SPSB3-207ENST00000565550 TRDCB7Z8K6 153 aa14.91□□□□□ -0.02
SPSB3-207ENST00000565550 YPEL1O60688 119 aa14.91□□□□□ -0.02
SPSB3-207ENST00000565550 OR3A3P47888 321 aa14.91□□□□□ -0.02
SPSB3-207ENST00000565550 MRPS15P82914 257 aaKnown RBP14.91□□□□□ -0.02
SPSB3-207ENST00000565550 ZNF816Q0VGE8 651 aaPredicted RBP14.91□□□□□ -0.02
SPSB3-207ENST00000565550 TMEM30BQ3MIR4 351 aa14.91□□□□□ -0.02
SPSB3-207ENST00000565550 Q3ZCU0 254 aa14.91□□□□□ -0.02
SPSB3-207ENST00000565550 C8orf86Q6ZUL3 223 aa14.91□□□□□ -0.02
SPSB3-207ENST00000565550 MOB3BQ86TA1 216 aa14.91□□□□□ -0.02
SPSB3-207ENST00000565550 CLVS1Q8IUQ0 354 aaPredicted RBP14.91□□□□□ -0.02
SPSB3-207ENST00000565550 SAMD12Q8N8I0 201 aa14.91□□□□□ -0.02
SPSB3-207ENST00000565550 RTN4IP1Q8WWV3 396 aaPredicted RBP14.91□□□□□ -0.02
SPSB3-207ENST00000565550 YPEL2Q96QA6 119 aa14.91□□□□□ -0.02
SPSB3-207ENST00000565550 DCSTAMPQ9H295 470 aa14.91□□□□□ -0.02
SPSB3-207ENST00000565550 IFI27L2Q9H2X8 130 aa14.91□□□□□ -0.02
SPSB3-207ENST00000565550 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.91□□□□□ -0.02
SPSB3-207ENST00000565550 ZFP57Q9NU63 452 aa14.91□□□□□ -0.02
SPSB3-207ENST00000565550 EIF4EP06730 217 aaKnown RBP14.9□□□□□ -0.02
SPSB3-207ENST00000565550 FCER2P06734 321 aa14.9□□□□□ -0.02
SPSB3-207ENST00000565550 SCAND1P57086 179 aa14.9□□□□□ -0.02
SPSB3-207ENST00000565550 SPCS2Q15005 226 aa14.9□□□□□ -0.02
SPSB3-207ENST00000565550 HACD4Q5VWC8 232 aa14.9□□□□□ -0.02
SPSB3-207ENST00000565550 C11orf87Q6NUJ2 197 aa14.9□□□□□ -0.02
SPSB3-207ENST00000565550 SLC35E3Q7Z769 313 aa14.9□□□□□ -0.02
SPSB3-207ENST00000565550 DPF1Q92782 380 aa14.9□□□□□ -0.02
SPSB3-207ENST00000565550 GPR61Q9BZJ8 451 aa14.9□□□□□ -0.02
SPSB3-207ENST00000565550 SAA2-SAA4A0A096LPE2 208 aa14.89□□□□□ -0.03
SPSB3-207ENST00000565550 LINC01548A6NM66 108 aa14.89□□□□□ -0.03
SPSB3-207ENST00000565550 NUDT19A8MXV4 375 aa14.89□□□□□ -0.03
SPSB3-207ENST00000565550 FABP7O15540 132 aa14.89□□□□□ -0.03
SPSB3-207ENST00000565550 IGHG2P01859 326 aa14.89□□□□□ -0.03
SPSB3-207ENST00000565550 GAPDHP04406 335 aaKnown RBP14.89□□□□□ -0.03
SPSB3-207ENST00000565550 SAA2P0DJI9 122 aaPredicted RBP14.89□□□□□ -0.03
SPSB3-207ENST00000565550 CEACAM6P40199 344 aa14.89□□□□□ -0.03
SPSB3-207ENST00000565550 MYCNOSP40205 109 aa14.89□□□□□ -0.03
SPSB3-207ENST00000565550 SLC35B1P78383 322 aa14.89□□□□□ -0.03
SPSB3-207ENST00000565550 EBI3Q14213 229 aa14.89□□□□□ -0.03
SPSB3-207ENST00000565550 UBE2NLQ5JXB2 153 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms