RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 NKX2-6A6NCS4 301 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 H0YL77 283 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 SIRPB1O00241 398 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 TIMM8AO60220 97 aaPredicted RBP6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 HAND1O96004 215 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 RAB5CP51148 216 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 PAX5Q02548 391 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 MSMO1Q15800 293 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 SPAG16Q8N0X2 631 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 LYPD6BQ8NI32 183 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 PLPPR1Q8TBJ4 325 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 C17orf50Q8WW18 174 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 LSM10Q969L4 123 aaKnown RBP6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 GINS3Q9BRX5 216 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 OPN3Q9H1Y3 402 aaPredicted RBP6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 PLEKHF2Q9H8W4 249 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 ASF1BQ9NVP2 202 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 KCNIP1Q9NZI2 227 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 TINAGQ9UJW2 476 aa6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 RCL1Q9Y2P8 373 aaKnown RBP6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 HEATR1Q9H583 2144 aaKnown RBP6.1□□□□□ -1.43
HERPUD1-209ENST00000564678 TMEM30CPA0ZSE6 113 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 OOEPA6NGQ2 149 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 HSPA12AO43301 675 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 SCO1O75880 301 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 APOC3P02656 99 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 SERPINE2P07093 398 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 CFHR2P36980 270 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 CDKN1AP38936 164 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 FABP6P51161 128 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 CAV2P51636 162 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 ZNF266Q14584 549 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 WDR82Q6UXN9 313 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 ACP7Q6ZNF0 438 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 C5orf24Q7Z6I8 188 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 COMMD1Q8N668 190 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 RBMXL3Q8N7X1 1067 aaKnown RBP6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 BPIFCQ8NFQ6 507 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 IL1F10Q8WWZ1 152 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 ERGIC1Q969X5 290 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 C5orf30Q96GV9 206 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 SFXN3Q9BWM7 321 aa6.09□□□□□ -1.43
HERPUD1-209ENST00000564678 NPIPB5A8MRT5 1133 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 RNF212BA8MTL3 300 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 ST8SIA5O15466 376 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 PITX3O75364 302 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 SPP1P10451 314 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 CEACAM8P31997 349 aaPredicted RBP6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 BAXQ07812 192 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 SMIM21Q3B7S5 101 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 C10orf91Q5T1B1 145 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 PXDC1Q5TGL8 231 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 BTNL8Q6UX41 500 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 Q6ZR03 302 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 FAM219AQ8IW50 185 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 OR10Z1Q8NGY1 313 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 ST6GALNAC6Q969X2 333 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 GALMQ96C23 342 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 LYRM2Q9NU23 88 aaPredicted RBP6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 XKRY2A2RUG3 117 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 MKRN2OSH3BPM6 223 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 PSPNO60542 156 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 MED6O75586 246 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 ATG12O94817 140 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 IGLV2-14P01704 120 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 IGHV3-13P01766 116 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 DANCRP0C864 163 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 GLRXP35754 106 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 CEACAM6P40199 344 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 POLR2GP62487 172 aaKnown RBP eCLIP6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 EWSR1Q01844 656 aaKnown RBP eCLIP6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 NHLH2Q02577 135 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 CR1LQ2VPA4 569 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 SVBPQ8N300 66 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 TCTEX1D1Q8N7M0 179 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 MUCL1Q96DR8 90 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 LURAP1Q96LR2 239 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 SEC11CQ9BY50 192 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 OR1A1Q9P1Q5 309 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 PLA2G2DQ9UNK4 145 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 RBM7Q9Y580 266 aaKnown RBP6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 FAM215AQ9Y5M1 114 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 DMXL1Q9Y485 3027 aa6.08□□□□□ -1.44
HERPUD1-209ENST00000564678 C17orf100A8MU93 164 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 TRIM77I1YAP6 450 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 WRBO00258 174 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 CRYAAP02489 173 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 SPINK2P20155 84 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 SMCPP49901 116 aaPredicted RBP6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 BTN1A1Q13410 526 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 IGFBP7Q16270 282 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 AARDQ4LEZ3 155 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 CXorf66Q5JRM2 361 aaPredicted RBP6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 ZNF474Q6S9Z5 364 aaPredicted RBP6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 CENPVQ7Z7K6 275 aaPredicted RBP6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 TMEM252Q8N6L7 170 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 STPG3Q8N7X2 389 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 FAM57AQ8TBR7 257 aa6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 NARS2Q96I59 477 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-209ENST00000564678 RAB40CQ96S21 281 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms