RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 GNMTQ14749 295 aa12.88□□□□□ -0.35
COMMD4-210ENST00000564587 THOC7Q6I9Y2 204 aaKnown RBP12.88□□□□□ -0.35
COMMD4-210ENST00000564587 ACOT7LQ6ZUV0 252 aa12.88□□□□□ -0.35
COMMD4-210ENST00000564587 ZNF767PQ75MW2 155 aa12.88□□□□□ -0.35
COMMD4-210ENST00000564587 LYZL2Q7Z4W2 148 aa12.88□□□□□ -0.35
COMMD4-210ENST00000564587 SLC35G3Q8N808 338 aa12.88□□□□□ -0.35
COMMD4-210ENST00000564587 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-210ENST00000564587 GSKIPQ9P0R6 139 aa12.88□□□□□ -0.35
COMMD4-210ENST00000564587 TNFSF18Q9UNG2 199 aa12.88□□□□□ -0.35
COMMD4-210ENST00000564587 A0A1B0GW55 424 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 CLEC18AA5D8T8 446 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 C19orf84I3L1E1 186 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 TNFSF12O43508 249 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 RP2O75695 350 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 IGHV2-70P01814 119 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 SOD3P08294 240 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 DUX4L2P0CJ85 424 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 DUX4L3P0CJ86 424 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 DUX4L4P0CJ87 422 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 DUX4L5P0CJ88 424 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 DUX4L6P0CJ89 424 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 DUX4L7P0CJ90 424 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 CXCL2P19875 107 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 COL8A2P25067 703 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 GPR12P47775 334 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 TMEM33P57088 247 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 OPCMLQ14982 345 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 LRRC37A5PQ49AS3 106 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 TMEM155Q4W5P6 130 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 DUX4L9Q6RFH8 374 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-210ENST00000564587 CLEC18CQ8NCF0 446 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 OR51H1Q8NH63 302 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 LHFPL5Q8TAF8 219 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 CD300LFQ8TDQ1 290 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 LSM10Q969L4 123 aaKnown RBP12.87□□□□□ -0.35
COMMD4-210ENST00000564587 ZNF714Q96N38 554 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 SPOCK3Q9BQ16 436 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 AGMATQ9BSE5 352 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 PARP12Q9H0J9 701 aaKnown RBP12.87□□□□□ -0.35
COMMD4-210ENST00000564587 DUX4Q9UBX2 424 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 MIOXQ9UGB7 285 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 PSG11Q9UQ72 335 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 LAMP3Q9UQV4 416 aa12.87□□□□□ -0.35
COMMD4-210ENST00000564587 SPTBN1Q01082 2364 aaKnown RBP12.86□□□□□ -0.35
COMMD4-210ENST00000564587 IGHV3-43A0A0B4J1X8 118 aa12.86□□□□□ -0.35
COMMD4-210ENST00000564587 A0A1W2PPH5 198 aa12.86□□□□□ -0.35
COMMD4-210ENST00000564587 MPTX1A8MV57 137 aa12.86□□□□□ -0.35
COMMD4-210ENST00000564587 DVL1O14640 695 aa12.86□□□□□ -0.35
COMMD4-210ENST00000564587 IGHV3-43DP0DP04 118 aa12.86□□□□□ -0.35
COMMD4-210ENST00000564587 DAOP14920 347 aa12.86□□□□□ -0.35
COMMD4-210ENST00000564587 TMUB2Q71RG4 321 aa12.86□□□□□ -0.35
COMMD4-210ENST00000564587 KCNRGQ8N5I3 272 aa12.86□□□□□ -0.35
COMMD4-210ENST00000564587 CHODLQ9H9P2 273 aa12.86□□□□□ -0.35
COMMD4-210ENST00000564587 MBD2Q9UBB5 411 aa12.86□□□□□ -0.35
COMMD4-210ENST00000564587 ITGB1BP2Q9UKP3 347 aa12.86□□□□□ -0.35
COMMD4-210ENST00000564587 RNF150Q9ULK6 438 aa12.86□□□□□ -0.35
COMMD4-210ENST00000564587 ABCA4P78363 2273 aa12.85□□□□□ -0.35
COMMD4-210ENST00000564587 A0A1B0GU03 582 aa12.85□□□□□ -0.35
COMMD4-210ENST00000564587 CLDN1O95832 211 aa12.85□□□□□ -0.35
COMMD4-210ENST00000564587 KIR2DS2P43631 304 aa12.85□□□□□ -0.35
COMMD4-210ENST00000564587 EIF4EBP1Q13541 118 aaPredicted RBP12.85□□□□□ -0.35
COMMD4-210ENST00000564587 RAB32Q13637 225 aa12.85□□□□□ -0.35
COMMD4-210ENST00000564587 NDUFA5Q16718 116 aa12.85□□□□□ -0.35
COMMD4-210ENST00000564587 LTC4SQ16873 150 aa12.85□□□□□ -0.35
COMMD4-210ENST00000564587 LYPD2Q6UXB3 125 aa12.85□□□□□ -0.35
COMMD4-210ENST00000564587 HEPN1Q6WQI6 88 aa12.85□□□□□ -0.35
COMMD4-210ENST00000564587 TCF23Q7RTU1 214 aa12.85□□□□□ -0.35
COMMD4-210ENST00000564587 FAM219AQ8IW50 185 aa12.85□□□□□ -0.35
COMMD4-210ENST00000564587 DCUN1D4Q92564 292 aa12.85□□□□□ -0.35
COMMD4-210ENST00000564587 ABHD14AQ9BUJ0 271 aa12.85□□□□□ -0.35
COMMD4-210ENST00000564587 RNF126Q9BV68 326 aa12.85□□□□□ -0.35
COMMD4-210ENST00000564587 ARL6Q9H0F7 186 aa12.85□□□□□ -0.35
COMMD4-210ENST00000564587 UBTD1Q9HAC8 227 aa12.85□□□□□ -0.35
COMMD4-210ENST00000564587 SDHAF2Q9NX18 166 aa12.85□□□□□ -0.35
COMMD4-210ENST00000564587 RPUSD1Q9UJJ7 312 aaKnown RBP12.85□□□□□ -0.35
COMMD4-210ENST00000564587 ST8SIA5O15466 376 aa12.84□□□□□ -0.35
COMMD4-210ENST00000564587 ST8SIA3O43173 380 aa12.84□□□□□ -0.35
COMMD4-210ENST00000564587 TSC22D2O75157 780 aa12.84□□□□□ -0.35
COMMD4-210ENST00000564587 IFNA7P01567 189 aa12.84□□□□□ -0.35
COMMD4-210ENST00000564587 ZNF16P17020 682 aaPredicted RBP12.84□□□□□ -0.35
COMMD4-210ENST00000564587 SSTR2P30874 369 aa12.84□□□□□ -0.35
COMMD4-210ENST00000564587 S100A10P60903 97 aa12.84□□□□□ -0.35
COMMD4-210ENST00000564587 TLE4Q04727 773 aa12.84□□□□□ -0.35
COMMD4-210ENST00000564587 NMSQ5H8A3 153 aa12.84□□□□□ -0.35
COMMD4-210ENST00000564587 OR8B3Q8NGG8 313 aa12.84□□□□□ -0.35
COMMD4-210ENST00000564587 RNASE11Q8TAA1 199 aaKnown RBP12.84□□□□□ -0.35
COMMD4-210ENST00000564587 H1FXQ92522 213 aaKnown RBP12.84□□□□□ -0.35
COMMD4-210ENST00000564587 RRNAD1Q96FB5 475 aaKnown RBP12.84□□□□□ -0.35
COMMD4-210ENST00000564587 NEIL1Q96FI4 390 aaPredicted RBP12.84□□□□□ -0.35
COMMD4-210ENST00000564587 ADTRPQ96IZ2 230 aa12.84□□□□□ -0.35
COMMD4-210ENST00000564587 OR8B2Q96RD0 313 aa12.84□□□□□ -0.35
COMMD4-210ENST00000564587 PLEKHA2Q9HB19 425 aa12.84□□□□□ -0.35
COMMD4-210ENST00000564587 C19orf12Q9NSK7 152 aa12.84□□□□□ -0.35
COMMD4-210ENST00000564587 CTSZQ9UBR2 303 aa12.84□□□□□ -0.35
COMMD4-210ENST00000564587 KANTRA0A1W2PQU2 76 aa12.83□□□□□ -0.36
COMMD4-210ENST00000564587 E5RGE8 158 aa12.83□□□□□ -0.36
COMMD4-210ENST00000564587 RAB29O14966 203 aa12.83□□□□□ -0.36
COMMD4-210ENST00000564587 DEDDO75618 318 aa12.83□□□□□ -0.36
COMMD4-210ENST00000564587 F12P00748 615 aaPredicted RBP12.83□□□□□ -0.36
COMMD4-210ENST00000564587 PVALBP20472 110 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms