RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 CGB7P0DN87 165 aa12.48□□□□□ -0.41
RNF40-205ENST00000563909 HIST1H1DP16402 221 aaKnown RBP12.48□□□□□ -0.41
RNF40-205ENST00000563909 DEFB136Q30KP8 78 aa12.48□□□□□ -0.41
RNF40-205ENST00000563909 C6orf183Q5T699 404 aa12.48□□□□□ -0.41
RNF40-205ENST00000563909 SAMD12Q8N8I0 201 aa12.48□□□□□ -0.41
RNF40-205ENST00000563909 MRGPRDQ8TDS7 321 aa12.48□□□□□ -0.41
RNF40-205ENST00000563909 CCDC107Q8WV48 283 aa12.48□□□□□ -0.41
RNF40-205ENST00000563909 NOL4LQ96MY1 436 aaPredicted RBP12.48□□□□□ -0.41
RNF40-205ENST00000563909 CMSS1Q9BQ75 279 aaKnown RBP12.48□□□□□ -0.41
RNF40-205ENST00000563909 TM2D3Q9BRN9 247 aa12.48□□□□□ -0.41
RNF40-205ENST00000563909 CHMP1AQ9HD42 196 aaPredicted RBP12.48□□□□□ -0.41
RNF40-205ENST00000563909 RAB9BQ9NP90 201 aa12.48□□□□□ -0.41
RNF40-205ENST00000563909 CCDC59Q9P031 241 aaKnown RBP12.48□□□□□ -0.41
RNF40-205ENST00000563909 AK3Q9UIJ7 227 aa12.48□□□□□ -0.41
RNF40-205ENST00000563909 DSCAML1Q8TD84 2053 aa12.48□□□□□ -0.41
RNF40-205ENST00000563909 KIAA1109Q2LD37 5005 aa12.48□□□□□ -0.41
RNF40-205ENST00000563909 IGHV2-26A0A0B4J1V2 119 aa12.47□□□□□ -0.41
RNF40-205ENST00000563909 KBTBD11-OT1A0A1B0GTJ5 212 aa12.47□□□□□ -0.41
RNF40-205ENST00000563909 SERPINE3A8MV23 424 aa12.47□□□□□ -0.41
RNF40-205ENST00000563909 ORC5O43913 435 aa12.47□□□□□ -0.41
RNF40-205ENST00000563909 GNB3P16520 340 aa12.47□□□□□ -0.41
RNF40-205ENST00000563909 BRS3P32247 399 aa12.47□□□□□ -0.41
RNF40-205ENST00000563909 MRPS15P82914 257 aaKnown RBP12.47□□□□□ -0.41
RNF40-205ENST00000563909 CDNFQ49AH0 187 aa12.47□□□□□ -0.41
RNF40-205ENST00000563909 HEPN1Q6WQI6 88 aa12.47□□□□□ -0.41
RNF40-205ENST00000563909 OR4K15Q8NH41 348 aa12.47□□□□□ -0.41
RNF40-205ENST00000563909 MRPL30Q8TCC3 161 aaKnown RBP12.47□□□□□ -0.41
RNF40-205ENST00000563909 DDB2Q92466 427 aa12.47□□□□□ -0.41
RNF40-205ENST00000563909 DGCR14Q96DF8 476 aaKnown RBP12.47□□□□□ -0.41
RNF40-205ENST00000563909 CLEC7AQ9BXN2 247 aa12.47□□□□□ -0.41
RNF40-205ENST00000563909 CALYQ9NYX4 217 aa12.47□□□□□ -0.41
RNF40-205ENST00000563909 KCNIP1Q9NZI2 227 aa12.47□□□□□ -0.41
RNF40-205ENST00000563909 SESN1Q9Y6P5 492 aa12.47□□□□□ -0.41
RNF40-205ENST00000563909 A0A075B6Q4 140 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 TRBV6-6A0A0A6YYG2 114 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 TRAV39A0A0B4J263 110 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 DPPA5A6NC42 116 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 MFNGO00587 321 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 NAPSAO96009 420 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 GSTP1P09211 210 aaKnown RBP12.46□□□□□ -0.41
RNF40-205ENST00000563909 CD3GP09693 182 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 CDK2P24941 298 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 HTR1DP28221 377 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 C17orf58Q2M2W7 97 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 OR52W1Q6IF63 320 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 MOB1BQ7L9L4 216 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 ZNF554Q86TJ5 538 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 RTN4RL2Q86UN3 420 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 OR10A7Q8NGE5 316 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 OR8U1Q8NH10 309 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 CHPT1Q8WUD6 406 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 TMEM133Q9H2Q1 129 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 LINC00574Q9H8X3 128 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 C12orf4Q9NQ89 552 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 MBNL3Q9NUK0 354 aaKnown RBP12.46□□□□□ -0.41
RNF40-205ENST00000563909 MGAT4AQ9UM21 535 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 KCNK7Q9Y2U2 307 aa12.46□□□□□ -0.41
RNF40-205ENST00000563909 NPIPB11E5RHQ5 1161 aa12.45□□□□□ -0.42
RNF40-205ENST00000563909 M0QZK8 103 aa12.45□□□□□ -0.42
RNF40-205ENST00000563909 XRCC3O43542 346 aa12.45□□□□□ -0.42
RNF40-205ENST00000563909 APOA1P02647 267 aa12.45□□□□□ -0.42
RNF40-205ENST00000563909 ARFRP1Q13795 201 aa12.45□□□□□ -0.42
RNF40-205ENST00000563909 PNLIPRP3Q17RR3 467 aa12.45□□□□□ -0.42
RNF40-205ENST00000563909 PRAMEF5Q5TYX0 476 aa12.45□□□□□ -0.42
RNF40-205ENST00000563909 ZNF880Q6PDB4 577 aa12.45□□□□□ -0.42
RNF40-205ENST00000563909 LCNL1Q6ZST4 164 aa12.45□□□□□ -0.42
RNF40-205ENST00000563909 OR4P4Q8NGL7 312 aa12.45□□□□□ -0.42
RNF40-205ENST00000563909 ARL11Q969Q4 196 aa12.45□□□□□ -0.42
RNF40-205ENST00000563909 CYYR1Q96J86 154 aa12.45□□□□□ -0.42
RNF40-205ENST00000563909 IDI2-AS1Q9NZ38 188 aa12.45□□□□□ -0.42
RNF40-205ENST00000563909 TRAV18A0A075B6X5 111 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 FAM25AB3EWG3 89 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 FAM25CB3EWG5 89 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 FAM25GB3EWG6 89 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 C15orf65H3BRN8 121 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 SPINT2O43291 252 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 HPGDSO60760 199 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 RCC1P18754 421 aaPredicted RBP12.44□□□□□ -0.42
RNF40-205ENST00000563909 SSTR5P35346 364 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 TALDO1P37837 337 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 MNDAP41218 407 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 SLC35B1P78383 322 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 PITPNAQ00169 270 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 TMEM30BQ3MIR4 351 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 HACD4Q5VWC8 232 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 COMMD1Q8N668 190 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 SETD6Q8TBK2 473 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 DPM3Q9P2X0 92 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 LINC00527Q9UJ94 153 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 ADAM30Q9UKF2 790 aa12.44□□□□□ -0.42
RNF40-205ENST00000563909 SORL1Q92673 2214 aa12.43□□□□□ -0.42
RNF40-205ENST00000563909 C12orf77C9JDV5 145 aa12.43□□□□□ -0.42
RNF40-205ENST00000563909 MMP23AO75900 390 aa12.43□□□□□ -0.42
RNF40-205ENST00000563909 EIF4EP06730 217 aaKnown RBP12.43□□□□□ -0.42
RNF40-205ENST00000563909 ARHGDIBP52566 201 aa12.43□□□□□ -0.42
RNF40-205ENST00000563909 GNG2P59768 71 aa12.43□□□□□ -0.42
RNF40-205ENST00000563909 KIR2DS1Q14954 304 aa12.43□□□□□ -0.42
RNF40-205ENST00000563909 TMEM69Q5SWH9 247 aa12.43□□□□□ -0.42
RNF40-205ENST00000563909 RFESDQ8TAC1 157 aa12.43□□□□□ -0.42
RNF40-205ENST00000563909 KIRREL1Q96J84 757 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms