RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 NBR2O15453 112 aa13□□□□□ -0.33
HDGFL3-203ENST00000563404 SOX15O60248 233 aa13□□□□□ -0.33
HDGFL3-203ENST00000563404 CA11O75493 328 aa13□□□□□ -0.33
HDGFL3-203ENST00000563404 MAS1P04201 325 aa13□□□□□ -0.33
HDGFL3-203ENST00000563404 FUT3P21217 361 aa13□□□□□ -0.33
HDGFL3-203ENST00000563404 TPBGQ13641 420 aa13□□□□□ -0.33
HDGFL3-203ENST00000563404 C5orf64Q2M2E5 130 aa13□□□□□ -0.33
HDGFL3-203ENST00000563404 CASC10Q5T4H9 136 aa13□□□□□ -0.33
HDGFL3-203ENST00000563404 UBE2UQ5VVX9 321 aa13□□□□□ -0.33
HDGFL3-203ENST00000563404 ZNF833PQ6ZTB9 187 aa13□□□□□ -0.33
HDGFL3-203ENST00000563404 ZNF367Q7RTV3 350 aa13□□□□□ -0.33
HDGFL3-203ENST00000563404 NPBQ8NG41 125 aa13□□□□□ -0.33
HDGFL3-203ENST00000563404 DLX4Q92988 240 aaPredicted RBP13□□□□□ -0.33
HDGFL3-203ENST00000563404 ZNF251Q9BRH9 671 aa13□□□□□ -0.33
HDGFL3-203ENST00000563404 JPT1Q9UK76 154 aa13□□□□□ -0.33
HDGFL3-203ENST00000563404 SORL1Q92673 2214 aa13□□□□□ -0.33
HDGFL3-203ENST00000563404 SAA2-SAA4A0A096LPE2 208 aa12.99□□□□□ -0.33
HDGFL3-203ENST00000563404 OVOL1O14753 267 aa12.99□□□□□ -0.33
HDGFL3-203ENST00000563404 CRTAPO75718 401 aaPredicted RBP12.99□□□□□ -0.33
HDGFL3-203ENST00000563404 NDUFA3O95167 84 aa12.99□□□□□ -0.33
HDGFL3-203ENST00000563404 GLAP06280 429 aa12.99□□□□□ -0.33
HDGFL3-203ENST00000563404 SAA2P0DJI9 122 aaPredicted RBP12.99□□□□□ -0.33
HDGFL3-203ENST00000563404 SLURP1P55000 103 aa12.99□□□□□ -0.33
HDGFL3-203ENST00000563404 MLLT11Q13015 90 aaPredicted RBP12.99□□□□□ -0.33
HDGFL3-203ENST00000563404 OVCH2Q7RTZ1 564 aa12.99□□□□□ -0.33
HDGFL3-203ENST00000563404 ZNF429Q86V71 674 aa12.99□□□□□ -0.33
HDGFL3-203ENST00000563404 MS4A15Q8N5U1 240 aa12.99□□□□□ -0.33
HDGFL3-203ENST00000563404 MUC7Q8TAX7 377 aa12.99□□□□□ -0.33
HDGFL3-203ENST00000563404 CASTOR1Q8WTX7 329 aa12.99□□□□□ -0.33
HDGFL3-203ENST00000563404 RCHY1Q96PM5 261 aa12.99□□□□□ -0.33
HDGFL3-203ENST00000563404 DERL3Q96Q80 235 aa12.99□□□□□ -0.33
HDGFL3-203ENST00000563404 TPSG1Q9NRR2 321 aa12.99□□□□□ -0.33
HDGFL3-203ENST00000563404 PNMA8CA0A1B0GUJ8 204 aa12.98□□□□□ -0.33
HDGFL3-203ENST00000563404 YPEL1O60688 119 aa12.98□□□□□ -0.33
HDGFL3-203ENST00000563404 PDCD6O75340 191 aa12.98□□□□□ -0.33
HDGFL3-203ENST00000563404 SPNP16150 400 aa12.98□□□□□ -0.33
HDGFL3-203ENST00000563404 HTD2P86397 168 aa12.98□□□□□ -0.33
HDGFL3-203ENST00000563404 MED22Q15528 200 aa12.98□□□□□ -0.33
HDGFL3-203ENST00000563404 LIN54Q6MZP7 749 aa12.98□□□□□ -0.33
HDGFL3-203ENST00000563404 ZNF554Q86TJ5 538 aa12.98□□□□□ -0.33
HDGFL3-203ENST00000563404 CDH26Q8IXH8 852 aa12.98□□□□□ -0.33
HDGFL3-203ENST00000563404 FAM46BQ96A09 425 aa12.98□□□□□ -0.33
HDGFL3-203ENST00000563404 YPEL2Q96QA6 119 aa12.98□□□□□ -0.33
HDGFL3-203ENST00000563404 MGLLQ99685 303 aa12.98□□□□□ -0.33
HDGFL3-203ENST00000563404 IFI27L2Q9H2X8 130 aa12.98□□□□□ -0.33
HDGFL3-203ENST00000563404 VCX3AQ9NNX9 186 aa12.98□□□□□ -0.33
HDGFL3-203ENST00000563404 KCNIP1Q9NZI2 227 aa12.98□□□□□ -0.33
HDGFL3-203ENST00000563404 SAP30O75446 220 aa12.97□□□□□ -0.33
HDGFL3-203ENST00000563404 FRMD6-AS1P0C7T7 363 aa12.97□□□□□ -0.33
HDGFL3-203ENST00000563404 EGR2P11161 476 aaPredicted RBP12.97□□□□□ -0.33
HDGFL3-203ENST00000563404 SNRPBP14678 240 aaKnown RBP12.97□□□□□ -0.33
HDGFL3-203ENST00000563404 MAP2K4P45985 399 aa12.97□□□□□ -0.33
HDGFL3-203ENST00000563404 CRIP2P52943 208 aaPredicted RBP12.97□□□□□ -0.33
HDGFL3-203ENST00000563404 TRAM1Q15629 374 aa12.97□□□□□ -0.33
HDGFL3-203ENST00000563404 ECSCRQ19T08 205 aa12.97□□□□□ -0.33
HDGFL3-203ENST00000563404 LY6G6FQ5SQ64 297 aa12.97□□□□□ -0.33
HDGFL3-203ENST00000563404 FAM27D1Q5T7N8 215 aa12.97□□□□□ -0.33
HDGFL3-203ENST00000563404 THRSPQ92748 146 aa12.97□□□□□ -0.33
HDGFL3-203ENST00000563404 SULT4A1Q9BR01 284 aa12.97□□□□□ -0.33
HDGFL3-203ENST00000563404 TOLLIPQ9H0E2 274 aa12.97□□□□□ -0.33
HDGFL3-203ENST00000563404 IGHV4OR15-8A0A075B7B6 117 aa12.96□□□□□ -0.33
HDGFL3-203ENST00000563404 A0A087WW49 117 aa12.96□□□□□ -0.33
HDGFL3-203ENST00000563404 A0A1W2PN81 502 aa12.96□□□□□ -0.33
HDGFL3-203ENST00000563404 FCN1O00602 326 aa12.96□□□□□ -0.33
HDGFL3-203ENST00000563404 GP9P14770 177 aa12.96□□□□□ -0.33
HDGFL3-203ENST00000563404 CPEP16870 476 aa12.96□□□□□ -0.33
HDGFL3-203ENST00000563404 CELP19835 753 aa12.96□□□□□ -0.33
HDGFL3-203ENST00000563404 PSMA1P25786 263 aaKnown RBP12.96□□□□□ -0.33
HDGFL3-203ENST00000563404 CHRNA7P36544 502 aa12.96□□□□□ -0.33
HDGFL3-203ENST00000563404 HMGN3Q15651 99 aa12.96□□□□□ -0.33
HDGFL3-203ENST00000563404 FAM131AQ6UXB0 335 aa12.96□□□□□ -0.33
HDGFL3-203ENST00000563404 FBXL15Q9H469 300 aa12.96□□□□□ -0.33
HDGFL3-203ENST00000563404 GAR1Q9NY12 217 aaKnown RBP12.96□□□□□ -0.33
HDGFL3-203ENST00000563404 LINC01619G3V211 115 aa12.95□□□□□ -0.34
HDGFL3-203ENST00000563404 ST8SIA5O15466 376 aa12.95□□□□□ -0.34
HDGFL3-203ENST00000563404 CT45A6P0DMU7 189 aa12.95□□□□□ -0.34
HDGFL3-203ENST00000563404 CT45A5P0DMU8 189 aa12.95□□□□□ -0.34
HDGFL3-203ENST00000563404 CT45A7P0DMV0 189 aa12.95□□□□□ -0.34
HDGFL3-203ENST00000563404 CX3CL1P78423 397 aa12.95□□□□□ -0.34
HDGFL3-203ENST00000563404 OR10K2Q6IF99 312 aa12.95□□□□□ -0.34
HDGFL3-203ENST00000563404 ACSM6Q6P461 480 aa12.95□□□□□ -0.34
HDGFL3-203ENST00000563404 GLDNQ6ZMI3 551 aaPredicted RBP12.95□□□□□ -0.34
HDGFL3-203ENST00000563404 OR2AK2Q8NG84 335 aa12.95□□□□□ -0.34
HDGFL3-203ENST00000563404 ARPC1AQ92747 370 aa12.95□□□□□ -0.34
HDGFL3-203ENST00000563404 UFD1Q92890 307 aa12.95□□□□□ -0.34
HDGFL3-203ENST00000563404 GALMQ96C23 342 aa12.95□□□□□ -0.34
HDGFL3-203ENST00000563404 PARP12Q9H0J9 701 aaKnown RBP12.95□□□□□ -0.34
HDGFL3-203ENST00000563404 KIAA1456Q9P272 454 aa12.95□□□□□ -0.34
HDGFL3-203ENST00000563404 GAB2Q9UQC2 676 aa12.95□□□□□ -0.34
HDGFL3-203ENST00000563404 NUBP2Q9Y5Y2 271 aa12.95□□□□□ -0.34
HDGFL3-203ENST00000563404 A3GALT2U3KPV4 340 aa12.95□□□□□ -0.34
HDGFL3-203ENST00000563404 RGS11O94810 467 aa12.94□□□□□ -0.34
HDGFL3-203ENST00000563404 LGALS1P09382 135 aaKnown RBP12.94□□□□□ -0.34
HDGFL3-203ENST00000563404 GALP22466 123 aa12.94□□□□□ -0.34
HDGFL3-203ENST00000563404 INSL4Q14641 139 aa12.94□□□□□ -0.34
HDGFL3-203ENST00000563404 RPL39P5Q59GN2 51 aa12.94□□□□□ -0.34
HDGFL3-203ENST00000563404 ZNF660Q6AZW8 331 aaPredicted RBP12.94□□□□□ -0.34
HDGFL3-203ENST00000563404 PHYHIPQ92561 330 aa12.94□□□□□ -0.34
HDGFL3-203ENST00000563404 UQCC2Q9BRT2 126 aa12.94□□□□□ -0.34
HDGFL3-203ENST00000563404 FAAP24Q9BTP7 215 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms