RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 ZBTB25P24278 435 aa9.62□□□□□ -0.87
NSMCE1-204ENST00000563273 F2RL1P55085 397 aa9.62□□□□□ -0.87
NSMCE1-204ENST00000563273 CLDN12P56749 244 aa9.62□□□□□ -0.87
NSMCE1-204ENST00000563273 CFHR3Q02985 330 aa9.62□□□□□ -0.87
NSMCE1-204ENST00000563273 FOXE3Q13461 319 aa9.62□□□□□ -0.87
NSMCE1-204ENST00000563273 PNLIPRP3Q17RR3 467 aa9.62□□□□□ -0.87
NSMCE1-204ENST00000563273 PLAC9Q5JTB6 97 aa9.62□□□□□ -0.87
NSMCE1-204ENST00000563273 C5orf24Q7Z6I8 188 aa9.62□□□□□ -0.87
NSMCE1-204ENST00000563273 NPBQ8NG41 125 aa9.62□□□□□ -0.87
NSMCE1-204ENST00000563273 CENPOQ9BU64 300 aa9.62□□□□□ -0.87
NSMCE1-204ENST00000563273 MRPL20Q9BYC9 149 aaKnown RBP9.62□□□□□ -0.87
NSMCE1-204ENST00000563273 RBBP9O75884 186 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 NDUFA3O95167 84 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 IGHG4P01861 327 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 GADD45AP24522 165 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 MC5RP33032 325 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 OR3A3P47888 321 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 SERPINB10P48595 397 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 ACTBP60709 375 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 ARL6IP1Q15041 203 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 MMDQ15546 238 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 SRSF7Q16629 238 aaKnown RBP eCLIP9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 OXLD1Q5BKU9 147 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 KHDC1LQ5JSQ8 128 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 HES5Q5TA89 166 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 TPRA1Q86W33 373 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 LINC00482Q8N8I6 264 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 OR4A4PQ8NGN8 299 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 SETD6Q8TBK2 473 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 RAB3CQ96E17 227 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 RNF5Q99942 180 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 HDHD3Q9BSH5 251 aaPredicted RBP9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 GPR61Q9BZJ8 451 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 NECAP2Q9NVZ3 263 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 ZNF107Q9UII5 783 aaPredicted RBP9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 KCNK7Q9Y2U2 307 aa9.61□□□□□ -0.87
NSMCE1-204ENST00000563273 METTL21EPA6NDL7 271 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 LINC01548A6NM66 108 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 TRDCB7Z8K6 153 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 RAB27BO00194 218 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 NBR2O15453 112 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 ST8SIA5O15466 376 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 HSPA12AO43301 675 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 CEACAM6P40199 344 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 MYCNOSP40205 109 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 THBS3P49746 956 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 OR10A3P58181 314 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 MRPS15P82914 257 aaKnown RBP9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 KIR2DS1Q14954 304 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 C5orf64Q2M2E5 130 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 CXorf66Q5JRM2 361 aaPredicted RBP9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 C22orf42Q6IC83 251 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 ZNF773Q6PK81 442 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 ETV3LQ6ZN32 361 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 Q6ZS49 121 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 OR5AN1Q8NGI8 311 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 OR10R2Q8NGX6 335 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 HSPB9Q9BQS6 159 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 CABLES2Q9BTV7 478 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 C11orf54Q9H0W9 315 aaPredicted RBP9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 LINC00527Q9UJ94 153 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 STUB1Q9UNE7 303 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 GAB2Q9UQC2 676 aa9.6□□□□□ -0.87
NSMCE1-204ENST00000563273 PRKDCP78527 4128 aaKnown RBP9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 NOTCH3Q9UM47 2321 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 IGKV1-6A0A0C4DH72 117 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 NOTOA8MTQ0 251 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 H0YJW9 148 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 MFNGO00587 321 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 FCGR3AP08637 254 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 SCTP09683 121 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 CD3GP09693 182 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 CT45A6P0DMU7 189 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 CT45A5P0DMU8 189 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 CT45A7P0DMV0 189 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 HIST1H1DP16402 221 aaKnown RBP9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 VDAC1P21796 283 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 PSMB8P28062 276 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 PSMB9P28065 219 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 CDX1P47902 265 aaPredicted RBP9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 CRIP2P52943 208 aaPredicted RBP9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 NR2C2APQ86WQ0 139 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 ZNF695Q8IW36 515 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 MRPL41Q8IXM3 137 aaKnown RBP9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 MYOZ3Q8TDC0 251 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 P2RX4Q99571 388 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 MCRIP2Q9BUT9 160 aaKnown RBP9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 PARP12Q9H0J9 701 aaKnown RBP9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 TXNL4BQ9NX01 149 aaKnown RBP9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 OR1A1Q9P1Q5 309 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 KIAA1456Q9P272 454 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 TGP01266 2768 aa9.59□□□□□ -0.87
NSMCE1-204ENST00000563273 FABP7O15540 132 aa9.58□□□□□ -0.88
NSMCE1-204ENST00000563273 SCGNO76038 276 aa9.58□□□□□ -0.88
NSMCE1-204ENST00000563273 IGLL1P15814 213 aa9.58□□□□□ -0.88
NSMCE1-204ENST00000563273 PPIFP30405 207 aaKnown RBP9.58□□□□□ -0.88
NSMCE1-204ENST00000563273 SCAND1P57086 179 aa9.58□□□□□ -0.88
NSMCE1-204ENST00000563273 PLA2G7Q13093 441 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms